RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
TFE3-204ENST00000493583 FSD2A1L4K1 749 aa17.25■□□□□ 0.35
TFE3-204ENST00000493583 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
TFE3-204ENST00000493583 MCTP1Q6DN14 999 aa17.25■□□□□ 0.35
TFE3-204ENST00000493583 ERVK-7P63135 1459 aa17.25■□□□□ 0.35
TFE3-204ENST00000493583 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
TFE3-204ENST00000493583 ZRANB1Q9UGI0 708 aa17.25■□□□□ 0.35
TFE3-204ENST00000493583 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
TFE3-204ENST00000493583 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
TFE3-204ENST00000493583 MRE11P49959 708 aa17.24■□□□□ 0.35
TFE3-204ENST00000493583 UNC13BO14795 1591 aa17.24■□□□□ 0.35
TFE3-204ENST00000493583 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
TFE3-204ENST00000493583 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
TFE3-204ENST00000493583 OTUD7AQ8TE49 926 aaPredicted RBP17.23■□□□□ 0.35
TFE3-204ENST00000493583 NPATQ14207 1427 aa17.23■□□□□ 0.35
TFE3-204ENST00000493583 C14orf93Q9H972 538 aaKnown RBP17.23■□□□□ 0.35
TFE3-204ENST00000493583 YEATS2Q9ULM3 1422 aa17.23■□□□□ 0.35
TFE3-204ENST00000493583 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
TFE3-204ENST00000493583 SMARCA5O60264 1052 aaPredicted RBP17.23■□□□□ 0.35
TFE3-204ENST00000493583 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
TFE3-204ENST00000493583 CAVIN1Q6NZI2 390 aaKnown RBP17.23■□□□□ 0.35
TFE3-204ENST00000493583 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
TFE3-204ENST00000493583 RNF214Q8ND24 703 aa17.23■□□□□ 0.35
TFE3-204ENST00000493583 TSHZ3Q63HK5 1081 aa17.22■□□□□ 0.35
TFE3-204ENST00000493583 CHD1LQ86WJ1 897 aa17.22■□□□□ 0.35
TFE3-204ENST00000493583 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
TFE3-204ENST00000493583 DDX19BQ9UMR2 479 aa17.22■□□□□ 0.35
TFE3-204ENST00000493583 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
TFE3-204ENST00000493583 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
TFE3-204ENST00000493583 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
TFE3-204ENST00000493583 SLC24A1O60721 1099 aa17.22■□□□□ 0.35
TFE3-204ENST00000493583 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
TFE3-204ENST00000493583 CLCN1P35523 988 aa17.21■□□□□ 0.35
TFE3-204ENST00000493583 TBC1D9Q6ZT07 1266 aa17.21■□□□□ 0.35
TFE3-204ENST00000493583 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
TFE3-204ENST00000493583 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
TFE3-204ENST00000493583 CEBPAP49715 358 aaPredicted RBP17.2■□□□□ 0.34
TFE3-204ENST00000493583 FAM13BQ9NYF5 915 aa17.2■□□□□ 0.34
TFE3-204ENST00000493583 EVC2Q86UK5 1308 aa17.2■□□□□ 0.34
TFE3-204ENST00000493583 RBM33Q96EV2 1170 aaKnown RBP17.19■□□□□ 0.34
TFE3-204ENST00000493583 SYNMO15061 1565 aa17.19■□□□□ 0.34
TFE3-204ENST00000493583 PLXNC1O60486 1568 aa17.19■□□□□ 0.34
TFE3-204ENST00000493583 KIAA1211Q6ZU35 1233 aa17.18■□□□□ 0.34
TFE3-204ENST00000493583 ZBTB40Q9NUA8 1239 aa17.18■□□□□ 0.34
TFE3-204ENST00000493583 AK9Q5TCS8 1911 aa17.18■□□□□ 0.34
TFE3-204ENST00000493583 DDX11L8A8MPP1 907 aa17.18■□□□□ 0.34
TFE3-204ENST00000493583 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
TFE3-204ENST00000493583 POLR3AO14802 1390 aaPredicted RBP17.18■□□□□ 0.34
TFE3-204ENST00000493583 NASPP49321 788 aaPredicted RBP17.17■□□□□ 0.34
TFE3-204ENST00000493583 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
TFE3-204ENST00000493583 ZGPATQ8N5A5 531 aaKnown RBP17.17■□□□□ 0.34
TFE3-204ENST00000493583 JARID2Q92833 1246 aaPredicted RBP17.17■□□□□ 0.34
TFE3-204ENST00000493583 R3HCC1Q9Y3T6 440 aaKnown RBP17.17■□□□□ 0.34
TFE3-204ENST00000493583 RTEL1-TNFRSF6BF6WH68 1400 aa17.17■□□□□ 0.34
TFE3-204ENST00000493583 RRP9O43818 475 aaKnown RBP17.16■□□□□ 0.34
TFE3-204ENST00000493583 KIF2CQ99661 725 aa17.16■□□□□ 0.34
TFE3-204ENST00000493583 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
TFE3-204ENST00000493583 GBP4Q96PP9 640 aa17.16■□□□□ 0.34
TFE3-204ENST00000493583 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
TFE3-204ENST00000493583 PRPF40AO75400 957 aaKnown RBP17.15■□□□□ 0.34
TFE3-204ENST00000493583 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
TFE3-204ENST00000493583 PTPRTO14522 1441 aa17.15■□□□□ 0.34
TFE3-204ENST00000493583 ZNF518AQ6AHZ1 1483 aa17.15■□□□□ 0.34
TFE3-204ENST00000493583 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
TFE3-204ENST00000493583 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
TFE3-204ENST00000493583 MIS18AQ9NYP9 233 aa17.15■□□□□ 0.34
TFE3-204ENST00000493583 NUCB1Q02818 461 aa17.14■□□□□ 0.33
TFE3-204ENST00000493583 SIRT2Q8IXJ6 389 aa17.14■□□□□ 0.33
TFE3-204ENST00000493583 LARP6Q9BRS8 491 aaKnown RBP17.14■□□□□ 0.33
TFE3-204ENST00000493583 TRPM2O94759 1503 aa17.14■□□□□ 0.33
TFE3-204ENST00000493583 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
TFE3-204ENST00000493583 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
TFE3-204ENST00000493583 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
TFE3-204ENST00000493583 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
TFE3-204ENST00000493583 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
TFE3-204ENST00000493583 GDPD2Q9HCC8 539 aa17.13■□□□□ 0.33
TFE3-204ENST00000493583 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
TFE3-204ENST00000493583 FAM177BA6PVY3 158 aa17.12■□□□□ 0.33
TFE3-204ENST00000493583 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
TFE3-204ENST00000493583 FYB1O15117 783 aa17.12■□□□□ 0.33
TFE3-204ENST00000493583 CEP152O94986 1710 aa17.12■□□□□ 0.33
TFE3-204ENST00000493583 TSC1Q92574 1164 aa17.11■□□□□ 0.33
TFE3-204ENST00000493583 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
TFE3-204ENST00000493583 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
TFE3-204ENST00000493583 HDAC1Q13547 482 aaPredicted RBP17.11■□□□□ 0.33
TFE3-204ENST00000493583 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
TFE3-204ENST00000493583 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
TFE3-204ENST00000493583 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
TFE3-204ENST00000493583 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
TFE3-204ENST00000493583 NME9Q86XW9 330 aa17.1■□□□□ 0.33
TFE3-204ENST00000493583 C8orf58Q8NAV2 365 aa17.1■□□□□ 0.33
TFE3-204ENST00000493583 MSNP26038 577 aaKnown RBP17.1■□□□□ 0.33
TFE3-204ENST00000493583 PLCB2Q00722 1185 aa17.1■□□□□ 0.33
TFE3-204ENST00000493583 RAB3GAP1Q15042 981 aa17.1■□□□□ 0.33
TFE3-204ENST00000493583 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
TFE3-204ENST00000493583 IPO8O15397 1037 aaKnown RBP17.09■□□□□ 0.33
TFE3-204ENST00000493583 GSPT1P15170 499 aaKnown RBP17.09■□□□□ 0.33
TFE3-204ENST00000493583 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
TFE3-204ENST00000493583 C14orf37Q86TY3 774 aa17.09■□□□□ 0.33
TFE3-204ENST00000493583 PRDM10Q9NQV6 1147 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms