RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 KANK1Q14678 1352 aa11.9□□□□□ -0.5
VPS8-225ENST00000492449 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
VPS8-225ENST00000492449 APAF1O14727 1248 aa11.9□□□□□ -0.5
VPS8-225ENST00000492449 MMP14P50281 582 aa11.9□□□□□ -0.5
VPS8-225ENST00000492449 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
VPS8-225ENST00000492449 PDS5BQ9NTI5 1447 aa11.89□□□□□ -0.51
VPS8-225ENST00000492449 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
VPS8-225ENST00000492449 CALCOCO1Q9P1Z2 691 aa11.89□□□□□ -0.51
VPS8-225ENST00000492449 MORC2Q9Y6X9 1032 aaPredicted RBP11.89□□□□□ -0.51
VPS8-225ENST00000492449 NUP160Q12769 1436 aa11.89□□□□□ -0.51
VPS8-225ENST00000492449 CLTCL1P53675 1640 aa11.89□□□□□ -0.51
VPS8-225ENST00000492449 MVPQ14764 893 aaKnown RBP11.89□□□□□ -0.51
VPS8-225ENST00000492449 UVSSAQ2YD98 709 aa11.89□□□□□ -0.51
VPS8-225ENST00000492449 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
VPS8-225ENST00000492449 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
VPS8-225ENST00000492449 BRD2P25440 801 aaKnown RBP11.88□□□□□ -0.51
VPS8-225ENST00000492449 CTNNA3Q9UI47 895 aa11.88□□□□□ -0.51
VPS8-225ENST00000492449 DDX41Q9UJV9 622 aaKnown RBP11.88□□□□□ -0.51
VPS8-225ENST00000492449 ADCY10Q96PN6 1610 aa11.88□□□□□ -0.51
VPS8-225ENST00000492449 PTMAP06454 111 aaKnown RBP11.88□□□□□ -0.51
VPS8-225ENST00000492449 TMF1P82094 1093 aa11.88□□□□□ -0.51
VPS8-225ENST00000492449 TERF2Q15554 542 aa11.88□□□□□ -0.51
VPS8-225ENST00000492449 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
VPS8-225ENST00000492449 SECISBP2LQ93073 1101 aaKnown RBP11.88□□□□□ -0.51
VPS8-225ENST00000492449 CAPN2P17655 700 aa11.88□□□□□ -0.51
VPS8-225ENST00000492449 TMEM63CQ9P1W3 806 aa11.88□□□□□ -0.51
VPS8-225ENST00000492449 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
VPS8-225ENST00000492449 IQGAP1P46940 1657 aa11.87□□□□□ -0.51
VPS8-225ENST00000492449 IQSEC2Q5JU85 1478 aa11.87□□□□□ -0.51
VPS8-225ENST00000492449 CCDC141Q6ZP82 1450 aa11.87□□□□□ -0.51
VPS8-225ENST00000492449 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
VPS8-225ENST00000492449 IGSF3O75054 1194 aa11.87□□□□□ -0.51
VPS8-225ENST00000492449 MBD3O95983 291 aa11.87□□□□□ -0.51
VPS8-225ENST00000492449 ANKRD50Q9ULJ7 1429 aa11.86□□□□□ -0.51
VPS8-225ENST00000492449 BMP2KLQ5H9B9 411 aa11.86□□□□□ -0.51
VPS8-225ENST00000492449 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
VPS8-225ENST00000492449 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 SYCE3A1L190 88 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
VPS8-225ENST00000492449 CCDC146Q8IYE0 955 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 FAM184AQ8NB25 1140 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 FAM53CQ9NYF3 392 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 RBM27Q9P2N5 1060 aaKnown RBP11.85□□□□□ -0.51
VPS8-225ENST00000492449 CHAF1AQ13111 956 aaPredicted RBP11.85□□□□□ -0.51
VPS8-225ENST00000492449 TSPY26PQ9H489 355 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 EFCC1Q9HA90 598 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
VPS8-225ENST00000492449 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 PHF23Q9BUL5 403 aaPredicted RBP11.85□□□□□ -0.51
VPS8-225ENST00000492449 GEMIN8Q9NWZ8 242 aaKnown RBP11.85□□□□□ -0.51
VPS8-225ENST00000492449 KDM2AQ9Y2K7 1162 aa11.85□□□□□ -0.51
VPS8-225ENST00000492449 PLB1Q6P1J6 1458 aa11.84□□□□□ -0.51
VPS8-225ENST00000492449 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
VPS8-225ENST00000492449 NCBP1Q09161 790 aaKnown RBP11.84□□□□□ -0.51
VPS8-225ENST00000492449 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
VPS8-225ENST00000492449 NUCB1Q02818 461 aa11.83□□□□□ -0.52
VPS8-225ENST00000492449 ANKRD36BQ8N2N9 1353 aa11.83□□□□□ -0.52
VPS8-225ENST00000492449 A2MP01023 1474 aa11.83□□□□□ -0.52
VPS8-225ENST00000492449 PRPF40AO75400 957 aaKnown RBP11.83□□□□□ -0.52
VPS8-225ENST00000492449 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
VPS8-225ENST00000492449 TNNQ9UQP3 1299 aa11.83□□□□□ -0.52
VPS8-225ENST00000492449 ZNF644Q9H582 1327 aaPredicted RBP11.82□□□□□ -0.52
VPS8-225ENST00000492449 TPM3P06753 285 aa11.82□□□□□ -0.52
VPS8-225ENST00000492449 RABEP1Q15276 862 aa11.82□□□□□ -0.52
VPS8-225ENST00000492449 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
VPS8-225ENST00000492449 SYNJ2O15056 1496 aa11.82□□□□□ -0.52
VPS8-225ENST00000492449 WDR63Q8IWG1 891 aa11.82□□□□□ -0.52
VPS8-225ENST00000492449 CDC42BPAQ5VT25 1732 aa11.81□□□□□ -0.52
VPS8-225ENST00000492449 KRT222Q8N1A0 295 aa11.81□□□□□ -0.52
VPS8-225ENST00000492449 KIF18AQ8NI77 898 aa11.81□□□□□ -0.52
VPS8-225ENST00000492449 NUP155O75694 1391 aa11.81□□□□□ -0.52
VPS8-225ENST00000492449 PPRC1Q5VV67 1664 aaKnown RBP11.8□□□□□ -0.52
VPS8-225ENST00000492449 SYAP1Q96A49 352 aaPredicted RBP11.8□□□□□ -0.52
VPS8-225ENST00000492449 FEZ2Q9UHY8 353 aaPredicted RBP11.8□□□□□ -0.52
VPS8-225ENST00000492449 CEP152O94986 1710 aa11.8□□□□□ -0.52
VPS8-225ENST00000492449 POLR3AO14802 1390 aaPredicted RBP11.8□□□□□ -0.52
VPS8-225ENST00000492449 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
VPS8-225ENST00000492449 PHF14O94880 888 aa11.8□□□□□ -0.52
VPS8-225ENST00000492449 CT47B1P0C2W7 299 aaPredicted RBP11.8□□□□□ -0.52
VPS8-225ENST00000492449 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
VPS8-225ENST00000492449 ZKSCAN2Q63HK3 967 aa11.79□□□□□ -0.52
VPS8-225ENST00000492449 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
VPS8-225ENST00000492449 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
VPS8-225ENST00000492449 ZDHHC9Q9Y397 364 aa11.79□□□□□ -0.52
VPS8-225ENST00000492449 DDX19BQ9UMR2 479 aa11.79□□□□□ -0.52
VPS8-225ENST00000492449 NSFL1CQ9UNZ2 370 aaKnown RBP11.79□□□□□ -0.52
VPS8-225ENST00000492449 KDM5AP29375 1690 aaKnown RBP11.79□□□□□ -0.52
VPS8-225ENST00000492449 PSEN1P49768 467 aa11.79□□□□□ -0.52
VPS8-225ENST00000492449 CCDC27Q2M243 656 aa11.79□□□□□ -0.52
VPS8-225ENST00000492449 RNF214Q8ND24 703 aa11.79□□□□□ -0.52
VPS8-225ENST00000492449 CHMP4AQ9BY43 222 aa11.79□□□□□ -0.52
VPS8-225ENST00000492449 TTC12Q9H892 705 aaPredicted RBP11.79□□□□□ -0.52
VPS8-225ENST00000492449 SMTNL1A8MU46 457 aa11.77□□□□□ -0.52
VPS8-225ENST00000492449 PKP1Q13835 747 aa11.77□□□□□ -0.52
VPS8-225ENST00000492449 TBC1D9Q6ZT07 1266 aa11.77□□□□□ -0.52
VPS8-225ENST00000492449 CFAP44Q96MT7 982 aa11.77□□□□□ -0.52
VPS8-225ENST00000492449 IQGAP2Q13576 1575 aa11.77□□□□□ -0.53
VPS8-225ENST00000492449 CFAP65Q6ZU64 1925 aaKnown RBP11.77□□□□□ -0.53
VPS8-225ENST00000492449 C17orf53Q8N3J3 647 aaPredicted RBP11.77□□□□□ -0.53
VPS8-225ENST00000492449 ADCY5O95622 1261 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms