RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 DDX17Q92841 729 aaKnown RBP30.64■■■□□ 2.5
USF3-203ENST00000491165 BRINP3Q76B58 766 aa30.64■■■□□ 2.49
USF3-203ENST00000491165 CC2D1BQ5T0F9 858 aaKnown RBP30.63■■■□□ 2.49
USF3-203ENST00000491165 SSH2Q76I76 1423 aa30.63■■■□□ 2.49
USF3-203ENST00000491165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.62■■■□□ 2.49
USF3-203ENST00000491165 ZNF692Q9BU19 519 aaPredicted RBP30.62■■■□□ 2.49
USF3-203ENST00000491165 EDC4Q6P2E9 1401 aaKnown RBP30.62■■■□□ 2.49
USF3-203ENST00000491165 XPCQ01831 940 aaPredicted RBP30.61■■■□□ 2.49
USF3-203ENST00000491165 KIF20BQ96Q89 1820 aa30.6■■■□□ 2.49
USF3-203ENST00000491165 MRS2Q9HD23 443 aa30.59■■■□□ 2.49
USF3-203ENST00000491165 RBM19Q9Y4C8 960 aaKnown RBP30.57■■■□□ 2.48
USF3-203ENST00000491165 ROBO1Q9Y6N7 1651 aa30.57■■■□□ 2.48
USF3-203ENST00000491165 TTC21BQ7Z4L5 1316 aa30.57■■■□□ 2.48
USF3-203ENST00000491165 FYB1O15117 783 aa30.56■■■□□ 2.48
USF3-203ENST00000491165 CERKQ8TCT0 537 aa30.56■■■□□ 2.48
USF3-203ENST00000491165 CGNL1Q0VF96 1302 aa30.56■■■□□ 2.48
USF3-203ENST00000491165 ANP32EQ9BTT0 268 aa30.56■■■□□ 2.48
USF3-203ENST00000491165 TRPM3Q9HCF6 1732 aaPredicted RBP30.56■■■□□ 2.48
USF3-203ENST00000491165 NME9Q86XW9 330 aa30.55■■■□□ 2.48
USF3-203ENST00000491165 GGNBP2Q9H3C7 697 aa30.55■■■□□ 2.48
USF3-203ENST00000491165 ZRANB1Q9UGI0 708 aa30.55■■■□□ 2.48
USF3-203ENST00000491165 PIK3C2AO00443 1686 aa30.54■■■□□ 2.48
USF3-203ENST00000491165 FAM9BQ8IZU0 186 aa30.54■■■□□ 2.48
USF3-203ENST00000491165 PSME1Q06323 249 aa30.53■■■□□ 2.48
USF3-203ENST00000491165 ERICH6BQ5W0A0 696 aa30.53■■■□□ 2.48
USF3-203ENST00000491165 NPC1L1Q9UHC9 1359 aa30.53■■■□□ 2.48
USF3-203ENST00000491165 IQSEC2Q5JU85 1478 aa30.52■■■□□ 2.48
USF3-203ENST00000491165 ANKRD26Q9UPS8 1709 aa30.52■■■□□ 2.48
USF3-203ENST00000491165 ZBED9Q6R2W3 1325 aa30.52■■■□□ 2.48
USF3-203ENST00000491165 PARD3Q8TEW0 1356 aa30.52■■■□□ 2.48
USF3-203ENST00000491165 PXDNQ92626 1479 aa30.51■■■□□ 2.47
USF3-203ENST00000491165 NHSL1Q5SYE7 1610 aa30.51■■■□□ 2.47
USF3-203ENST00000491165 IRX6P78412 446 aaPredicted RBP30.49■■■□□ 2.47
USF3-203ENST00000491165 KRT28Q7Z3Y7 464 aa30.49■■■□□ 2.47
USF3-203ENST00000491165 MARF1Q9Y4F3 1742 aaKnown RBP30.48■■■□□ 2.47
USF3-203ENST00000491165 PAK3O75914 559 aaPredicted RBP30.48■■■□□ 2.47
USF3-203ENST00000491165 NPHP3Q7Z494 1330 aa30.48■■■□□ 2.47
USF3-203ENST00000491165 UBAP1LF5GYI3 381 aa30.46■■■□□ 2.47
USF3-203ENST00000491165 TOM1O60784 492 aa30.46■■■□□ 2.47
USF3-203ENST00000491165 NSD2O96028 1365 aa30.45■■■□□ 2.47
USF3-203ENST00000491165 ALS2Q96Q42 1657 aa30.45■■■□□ 2.46
USF3-203ENST00000491165 TTC21AQ8NDW8 1320 aa30.44■■■□□ 2.46
USF3-203ENST00000491165 PIP4K2BP78356 416 aa30.44■■■□□ 2.46
USF3-203ENST00000491165 NUTM2GQ5VZR2 741 aa30.44■■■□□ 2.46
USF3-203ENST00000491165 OVOS2A0A0J9YW53 1432 aa30.43■■■□□ 2.46
USF3-203ENST00000491165 OVOS2Q6IE36 1432 aa30.43■■■□□ 2.46
USF3-203ENST00000491165 TNNT2P45379 298 aaPredicted RBP30.43■■■□□ 2.46
USF3-203ENST00000491165 FBLN1P23142 703 aa30.41■■■□□ 2.46
USF3-203ENST00000491165 ABTB2Q8N961 1025 aa30.41■■■□□ 2.46
USF3-203ENST00000491165 SOS2Q07890 1332 aaPredicted RBP30.41■■■□□ 2.46
USF3-203ENST00000491165 BRD4O60885 1362 aaPredicted RBP30.41■■■□□ 2.46
USF3-203ENST00000491165 RALBP1Q15311 655 aa30.4■■■□□ 2.46
USF3-203ENST00000491165 MORC1Q86VD1 984 aa30.4■■■□□ 2.46
USF3-203ENST00000491165 USP54Q70EL1 1684 aa30.39■■■□□ 2.46
USF3-203ENST00000491165 AHDC1Q5TGY3 1603 aaPredicted RBP30.38■■■□□ 2.45
USF3-203ENST00000491165 PPP4R2Q9NY27 417 aa30.38■■■□□ 2.45
USF3-203ENST00000491165 SBNO1A3KN83 1393 aa30.36■■■□□ 2.45
USF3-203ENST00000491165 USP31Q70CQ4 1352 aa30.36■■■□□ 2.45
USF3-203ENST00000491165 NLRP6P59044 892 aa30.36■■■□□ 2.45
USF3-203ENST00000491165 COG3Q96JB2 828 aa30.36■■■□□ 2.45
USF3-203ENST00000491165 LMOD2Q6P5Q4 547 aa30.35■■■□□ 2.45
USF3-203ENST00000491165 TNS3Q68CZ2 1445 aa30.35■■■□□ 2.45
USF3-203ENST00000491165 SPATA31A3Q5VYP0 1347 aa30.35■■■□□ 2.45
USF3-203ENST00000491165 MYBBP1AQ9BQG0 1328 aaKnown RBP30.35■■■□□ 2.45
USF3-203ENST00000491165 PPP2R1AP30153 589 aa30.34■■■□□ 2.45
USF3-203ENST00000491165 MAP2P11137 1827 aaKnown RBP30.33■■■□□ 2.45
USF3-203ENST00000491165 PHLPP1O60346 1717 aa30.32■■■□□ 2.44
USF3-203ENST00000491165 PLEKHG5O94827 1062 aa30.32■■■□□ 2.44
USF3-203ENST00000491165 SOX12O15370 315 aa30.31■■■□□ 2.44
USF3-203ENST00000491165 MED1Q15648 1581 aaPredicted RBP30.3■■■□□ 2.44
USF3-203ENST00000491165 COL16A1Q07092 1604 aaPredicted RBP30.3■■■□□ 2.44
USF3-203ENST00000491165 CRYBG1Q9Y4K1 1723 aa30.29■■■□□ 2.44
USF3-203ENST00000491165 RRS1Q15050 365 aaKnown RBP30.26■■■□□ 2.43
USF3-203ENST00000491165 NLRP13Q86W25 1043 aa30.25■■■□□ 2.43
USF3-203ENST00000491165 CABLES1Q8TDN4 633 aa30.25■■■□□ 2.43
USF3-203ENST00000491165 SLIT3O75094 1523 aa30.24■■■□□ 2.43
USF3-203ENST00000491165 PHRF1Q9P1Y6 1649 aaKnown RBP30.24■■■□□ 2.43
USF3-203ENST00000491165 NFAT5O94916 1531 aa30.24■■■□□ 2.43
USF3-203ENST00000491165 USP19O94966 1318 aa30.24■■■□□ 2.43
USF3-203ENST00000491165 SMG6Q86US8 1419 aaKnown RBP30.23■■■□□ 2.43
USF3-203ENST00000491165 MTHFSP49914 203 aa30.23■■■□□ 2.43
USF3-203ENST00000491165 POLKQ9UBT6 870 aa30.23■■■□□ 2.43
USF3-203ENST00000491165 EMILIN1Q9Y6C2 1016 aa30.23■■■□□ 2.43
USF3-203ENST00000491165 ARHGEF10O15013 1369 aa30.22■■■□□ 2.43
USF3-203ENST00000491165 AATKQ6ZMQ8 1374 aa30.22■■■□□ 2.43
USF3-203ENST00000491165 PEAK1Q9H792 1746 aa30.21■■■□□ 2.43
USF3-203ENST00000491165 ABCA3Q99758 1704 aa30.21■■■□□ 2.43
USF3-203ENST00000491165 LTN1O94822 1766 aa30.2■■■□□ 2.43
USF3-203ENST00000491165 FANCIQ9NVI1 1328 aa30.19■■■□□ 2.42
USF3-203ENST00000491165 GCP02774 474 aa30.19■■■□□ 2.42
USF3-203ENST00000491165 LRRC59Q96AG4 307 aaKnown RBP30.19■■■□□ 2.42
USF3-203ENST00000491165 MAP3K19Q56UN5 1328 aa30.16■■■□□ 2.42
USF3-203ENST00000491165 PPM1GO15355 546 aaPredicted RBP30.16■■■□□ 2.42
USF3-203ENST00000491165 PNPLA6Q8IY17 1366 aa30.14■■■□□ 2.42
USF3-203ENST00000491165 COL22A1Q8NFW1 1626 aaPredicted RBP30.13■■■□□ 2.41
USF3-203ENST00000491165 NUDCQ9Y266 331 aa30.13■■■□□ 2.41
USF3-203ENST00000491165 B4GALNT3Q6L9W6 998 aa30.13■■■□□ 2.41
USF3-203ENST00000491165 COL3A1P02461 1466 aaPredicted RBP30.12■■■□□ 2.41
USF3-203ENST00000491165 KCNH5Q8NCM2 988 aa30.11■■■□□ 2.41
USF3-203ENST00000491165 PNISRQ8TF01 805 aaKnown RBP30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms