RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 NUTM2GQ5VZR2 741 aa25.29■■□□□ 1.64
ABCF3-217ENST00000489719 ABTB2Q8N961 1025 aa25.29■■□□□ 1.64
ABCF3-217ENST00000489719 CCDC9Q9Y3X0 531 aaKnown RBP25.27■■□□□ 1.64
ABCF3-217ENST00000489719 UPF1Q92900 1129 aaKnown RBP eCLIP25.26■■□□□ 1.63
ABCF3-217ENST00000489719 SLIT2O94813 1529 aa25.26■■□□□ 1.63
ABCF3-217ENST00000489719 RGS12O14924 1447 aa25.24■■□□□ 1.63
ABCF3-217ENST00000489719 VPS72Q15906 364 aa25.24■■□□□ 1.63
ABCF3-217ENST00000489719 BTG4Q9NY30 223 aa25.24■■□□□ 1.63
ABCF3-217ENST00000489719 ITSN1Q15811 1721 aa25.23■■□□□ 1.63
ABCF3-217ENST00000489719 NLRP13Q86W25 1043 aa25.23■■□□□ 1.63
ABCF3-217ENST00000489719 PRDM11Q9NQV5 511 aa25.23■■□□□ 1.63
ABCF3-217ENST00000489719 ZNF692Q9BU19 519 aaPredicted RBP25.22■■□□□ 1.63
ABCF3-217ENST00000489719 TRPM3Q9HCF6 1732 aaPredicted RBP25.22■■□□□ 1.63
ABCF3-217ENST00000489719 QRICH2Q9H0J4 1663 aa25.21■■□□□ 1.63
ABCF3-217ENST00000489719 BRD4O60885 1362 aaPredicted RBP25.2■■□□□ 1.63
ABCF3-217ENST00000489719 ZC3H6P61129 1189 aaKnown RBP25.2■■□□□ 1.62
ABCF3-217ENST00000489719 RALGAPBQ86X10 1494 aa25.2■■□□□ 1.62
ABCF3-217ENST00000489719 TIMELESSQ9UNS1 1208 aa25.19■■□□□ 1.62
ABCF3-217ENST00000489719 ATAD2Q6PL18 1390 aa25.18■■□□□ 1.62
ABCF3-217ENST00000489719 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
ABCF3-217ENST00000489719 MARF1Q9Y4F3 1742 aaKnown RBP25.18■■□□□ 1.62
ABCF3-217ENST00000489719 ALS2Q96Q42 1657 aa25.17■■□□□ 1.62
ABCF3-217ENST00000489719 NLRP6P59044 892 aa25.17■■□□□ 1.62
ABCF3-217ENST00000489719 SLC24A1O60721 1099 aa25.16■■□□□ 1.62
ABCF3-217ENST00000489719 CHRNA2Q15822 529 aa25.16■■□□□ 1.62
ABCF3-217ENST00000489719 SBNO2Q9Y2G9 1366 aa25.16■■□□□ 1.62
ABCF3-217ENST00000489719 KIAA0232Q92628 1395 aa25.15■■□□□ 1.62
ABCF3-217ENST00000489719 TOPAZ1Q8N9V7 1692 aa25.14■■□□□ 1.62
ABCF3-217ENST00000489719 ST20-MTHFSA0A0A6YYL1 179 aa25.14■■□□□ 1.62
ABCF3-217ENST00000489719 GCP02774 474 aa25.14■■□□□ 1.62
ABCF3-217ENST00000489719 TMC1Q8TDI8 760 aa25.14■■□□□ 1.62
ABCF3-217ENST00000489719 USP6P35125 1406 aa25.13■■□□□ 1.61
ABCF3-217ENST00000489719 EVA1CP58658 441 aa25.13■■□□□ 1.61
ABCF3-217ENST00000489719 SEPT12Q8IYM1 358 aa25.13■■□□□ 1.61
ABCF3-217ENST00000489719 ONECUT3O60422 494 aaPredicted RBP25.12■■□□□ 1.61
ABCF3-217ENST00000489719 A0A0G2JS52 829 aa25.11■■□□□ 1.61
ABCF3-217ENST00000489719 MYT1Q01538 1121 aa25.11■■□□□ 1.61
ABCF3-217ENST00000489719 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
ABCF3-217ENST00000489719 TTC21BQ7Z4L5 1316 aa25.11■■□□□ 1.61
ABCF3-217ENST00000489719 PUS7Q96PZ0 661 aaKnown RBP25.1■■□□□ 1.61
ABCF3-217ENST00000489719 STRN4Q9NRL3 753 aa25.1■■□□□ 1.61
ABCF3-217ENST00000489719 USP19O94966 1318 aa25.1■■□□□ 1.61
ABCF3-217ENST00000489719 FAM98CQ17RN3 349 aaKnown RBP25.08■■□□□ 1.61
ABCF3-217ENST00000489719 HDGFL2Q7Z4V5 671 aaPredicted RBP25.08■■□□□ 1.61
ABCF3-217ENST00000489719 KTN1Q86UP2 1357 aaKnown RBP25.07■■□□□ 1.6
ABCF3-217ENST00000489719 ABCA3Q99758 1704 aa25.07■■□□□ 1.6
ABCF3-217ENST00000489719 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.07■■□□□ 1.6
ABCF3-217ENST00000489719 ZBTB7CA1YPR0 619 aa25.07■■□□□ 1.6
ABCF3-217ENST00000489719 SLC12A5Q9H2X9 1139 aa25.07■■□□□ 1.6
ABCF3-217ENST00000489719 TTC21AQ8NDW8 1320 aa25.07■■□□□ 1.6
ABCF3-217ENST00000489719 TESK2Q96S53 571 aa25.06■■□□□ 1.6
ABCF3-217ENST00000489719 SPATA31A5Q5VU36 1347 aa25.06■■□□□ 1.6
ABCF3-217ENST00000489719 SPATA31A7Q8IWB4 1347 aa25.06■■□□□ 1.6
ABCF3-217ENST00000489719 COL14A1Q05707 1796 aaKnown RBP25.05■■□□□ 1.6
ABCF3-217ENST00000489719 SSH2Q76I76 1423 aa25.05■■□□□ 1.6
ABCF3-217ENST00000489719 CCDC125Q86Z20 511 aa25.05■■□□□ 1.6
ABCF3-217ENST00000489719 TERF2IPQ9NYB0 399 aa25.05■■□□□ 1.6
ABCF3-217ENST00000489719 NWD2Q9ULI1 1742 aa25.05■■□□□ 1.6
ABCF3-217ENST00000489719 GLI3P10071 1580 aa25.05■■□□□ 1.6
ABCF3-217ENST00000489719 CPDO75976 1380 aa25.05■■□□□ 1.6
ABCF3-217ENST00000489719 KRT27Q7Z3Y8 459 aa25.04■■□□□ 1.6
ABCF3-217ENST00000489719 CPSF1Q10570 1443 aaKnown RBP25.03■■□□□ 1.6
ABCF3-217ENST00000489719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.03■■□□□ 1.6
ABCF3-217ENST00000489719 KCNH5Q8NCM2 988 aa25.03■■□□□ 1.6
ABCF3-217ENST00000489719 PLCH1Q4KWH8 1693 aa25.02■■□□□ 1.6
ABCF3-217ENST00000489719 TMF1P82094 1093 aa25.01■■□□□ 1.59
ABCF3-217ENST00000489719 USP35Q9P2H5 1018 aa25.01■■□□□ 1.59
ABCF3-217ENST00000489719 SPATA31A1Q5TZJ5 1347 aa25■■□□□ 1.59
ABCF3-217ENST00000489719 SOX12O15370 315 aa24.99■■□□□ 1.59
ABCF3-217ENST00000489719 USP47Q96K76 1375 aa24.99■■□□□ 1.59
ABCF3-217ENST00000489719 LARP1Q6PKG0 1096 aaKnown RBP24.98■■□□□ 1.59
ABCF3-217ENST00000489719 CRYBG1Q9Y4K1 1723 aa24.97■■□□□ 1.59
ABCF3-217ENST00000489719 CDCA8Q53HL2 280 aa24.96■■□□□ 1.59
ABCF3-217ENST00000489719 PHRF1Q9P1Y6 1649 aaKnown RBP24.96■■□□□ 1.59
ABCF3-217ENST00000489719 SF3B2Q13435 895 aaKnown RBP24.95■■□□□ 1.58
ABCF3-217ENST00000489719 AATKQ6ZMQ8 1374 aa24.94■■□□□ 1.58
ABCF3-217ENST00000489719 ARHGEF25Q86VW2 580 aa24.94■■□□□ 1.58
ABCF3-217ENST00000489719 NME9Q86XW9 330 aa24.94■■□□□ 1.58
ABCF3-217ENST00000489719 TCP11L2Q8N4U5 519 aa24.94■■□□□ 1.58
ABCF3-217ENST00000489719 ZRANB1Q9UGI0 708 aa24.94■■□□□ 1.58
ABCF3-217ENST00000489719 NRKQ7Z2Y5 1582 aa24.93■■□□□ 1.58
ABCF3-217ENST00000489719 NINLQ9Y2I6 1382 aa24.93■■□□□ 1.58
ABCF3-217ENST00000489719 NRAPQ86VF7 1730 aa24.92■■□□□ 1.58
ABCF3-217ENST00000489719 CAMTA1Q9Y6Y1 1673 aa24.92■■□□□ 1.58
ABCF3-217ENST00000489719 BARGINQ6ZT62 677 aa24.92■■□□□ 1.58
ABCF3-217ENST00000489719 THRAP3Q9Y2W1 955 aaKnown RBP24.92■■□□□ 1.58
ABCF3-217ENST00000489719 CD163L1Q9NR16 1453 aa24.9■■□□□ 1.58
ABCF3-217ENST00000489719 AXIN2Q9Y2T1 843 aa24.9■■□□□ 1.58
ABCF3-217ENST00000489719 SLIT3O75094 1523 aa24.9■■□□□ 1.58
ABCF3-217ENST00000489719 A0A1W2PP64 1363 aa24.9■■□□□ 1.58
ABCF3-217ENST00000489719 USP31Q70CQ4 1352 aa24.9■■□□□ 1.58
ABCF3-217ENST00000489719 EDC4Q6P2E9 1401 aaKnown RBP24.89■■□□□ 1.58
ABCF3-217ENST00000489719 PDE3BQ13370 1112 aa24.89■■□□□ 1.58
ABCF3-217ENST00000489719 TOM1L2Q6ZVM7 507 aa24.89■■□□□ 1.58
ABCF3-217ENST00000489719 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
ABCF3-217ENST00000489719 CSB-PGBD3P0DP91 1061 aa24.87■■□□□ 1.57
ABCF3-217ENST00000489719 FAM182BQ5T319 152 aa24.87■■□□□ 1.57
ABCF3-217ENST00000489719 PIK3C2AO00443 1686 aa24.87■■□□□ 1.57
ABCF3-217ENST00000489719 AKAP12Q02952 1782 aa24.85■■□□□ 1.57
ABCF3-217ENST00000489719 COL5A2P05997 1499 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms