RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 TRPM3Q9HCF6 1732 aaPredicted RBP8.43□□□□□ -1.06
CNOT9-207ENST00000489687 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
CNOT9-207ENST00000489687 QTRT2Q9H974 415 aaKnown RBP8.43□□□□□ -1.06
CNOT9-207ENST00000489687 POGKQ9P215 609 aa8.43□□□□□ -1.06
CNOT9-207ENST00000489687 USP21Q9UK80 565 aa8.43□□□□□ -1.06
CNOT9-207ENST00000489687 PRR36Q9H6K5 1346 aa8.43□□□□□ -1.06
CNOT9-207ENST00000489687 ATRNO75882 1429 aa8.43□□□□□ -1.06
CNOT9-207ENST00000489687 LMOD2Q6P5Q4 547 aa8.42□□□□□ -1.06
CNOT9-207ENST00000489687 PMFBP1Q8TBY8 1022 aa8.42□□□□□ -1.06
CNOT9-207ENST00000489687 UPF1Q92900 1129 aaKnown RBP eCLIP8.42□□□□□ -1.06
CNOT9-207ENST00000489687 PHF8Q9UPP1 1060 aa8.42□□□□□ -1.06
CNOT9-207ENST00000489687 SPATA31A3Q5VYP0 1347 aa8.42□□□□□ -1.06
CNOT9-207ENST00000489687 BCL9LQ86UU0 1499 aa8.42□□□□□ -1.06
CNOT9-207ENST00000489687 TULP4Q9NRJ4 1543 aa8.42□□□□□ -1.06
CNOT9-207ENST00000489687 GLI3P10071 1580 aa8.42□□□□□ -1.06
CNOT9-207ENST00000489687 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.42□□□□□ -1.06
CNOT9-207ENST00000489687 ALS2Q96Q42 1657 aa8.41□□□□□ -1.06
CNOT9-207ENST00000489687 ATP7BP35670 1465 aa8.41□□□□□ -1.06
CNOT9-207ENST00000489687 ANKARQ7Z5J8 1434 aa8.41□□□□□ -1.06
CNOT9-207ENST00000489687 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
CNOT9-207ENST00000489687 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
CNOT9-207ENST00000489687 RBM6P78332 1123 aaKnown RBP8.41□□□□□ -1.06
CNOT9-207ENST00000489687 KRT28Q7Z3Y7 464 aa8.41□□□□□ -1.06
CNOT9-207ENST00000489687 ITSN1Q15811 1721 aa8.4□□□□□ -1.06
CNOT9-207ENST00000489687 CRYBG1Q9Y4K1 1723 aa8.4□□□□□ -1.06
CNOT9-207ENST00000489687 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.06
CNOT9-207ENST00000489687 BRWD3Q6RI45 1802 aa8.4□□□□□ -1.07
CNOT9-207ENST00000489687 SLIT2O94813 1529 aa8.39□□□□□ -1.07
CNOT9-207ENST00000489687 RALGAPBQ86X10 1494 aa8.39□□□□□ -1.07
CNOT9-207ENST00000489687 HAP1P54257 671 aaPredicted RBP8.39□□□□□ -1.07
CNOT9-207ENST00000489687 KLHL34Q8N239 644 aa8.39□□□□□ -1.07
CNOT9-207ENST00000489687 PLCD3Q8N3E9 789 aa8.39□□□□□ -1.07
CNOT9-207ENST00000489687 FNBP4Q8N3X1 1017 aaPredicted RBP8.39□□□□□ -1.07
CNOT9-207ENST00000489687 NRAPQ86VF7 1730 aa8.39□□□□□ -1.07
CNOT9-207ENST00000489687 KIAA1210Q9ULL0 1709 aa8.39□□□□□ -1.07
CNOT9-207ENST00000489687 QRICH2Q9H0J4 1663 aa8.39□□□□□ -1.07
CNOT9-207ENST00000489687 TRPC5Q9UL62 973 aaPredicted RBP8.38□□□□□ -1.07
CNOT9-207ENST00000489687 NWD2Q9ULI1 1742 aa8.37□□□□□ -1.07
CNOT9-207ENST00000489687 PHRF1Q9P1Y6 1649 aaKnown RBP8.37□□□□□ -1.07
CNOT9-207ENST00000489687 PSME1Q06323 249 aa8.37□□□□□ -1.07
CNOT9-207ENST00000489687 NBPF1Q3BBV0 1214 aa8.37□□□□□ -1.07
CNOT9-207ENST00000489687 SIRT1Q96EB6 747 aa8.37□□□□□ -1.07
CNOT9-207ENST00000489687 SBNO1A3KN83 1393 aa8.36□□□□□ -1.07
CNOT9-207ENST00000489687 ARHGEF10O15013 1369 aa8.36□□□□□ -1.07
CNOT9-207ENST00000489687 ATAD2Q6PL18 1390 aa8.36□□□□□ -1.07
CNOT9-207ENST00000489687 WASLO00401 505 aaPredicted RBP8.36□□□□□ -1.07
CNOT9-207ENST00000489687 PRKCSHP14314 528 aaPredicted RBP8.36□□□□□ -1.07
CNOT9-207ENST00000489687 SPOCK2Q92563 424 aa8.36□□□□□ -1.07
CNOT9-207ENST00000489687 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
CNOT9-207ENST00000489687 EIF3AQ14152 1382 aaKnown RBP8.35□□□□□ -1.07
CNOT9-207ENST00000489687 GPRASP1Q5JY77 1395 aa8.35□□□□□ -1.07
CNOT9-207ENST00000489687 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
CNOT9-207ENST00000489687 NUTM2GQ5VZR2 741 aa8.35□□□□□ -1.07
CNOT9-207ENST00000489687 UNC5CLQ8IV45 518 aa8.35□□□□□ -1.07
CNOT9-207ENST00000489687 NGDNQ8NEJ9 315 aaKnown RBP8.35□□□□□ -1.07
CNOT9-207ENST00000489687 SIN3AQ96ST3 1273 aa8.35□□□□□ -1.07
CNOT9-207ENST00000489687 CCDC9Q9Y3X0 531 aaKnown RBP8.35□□□□□ -1.07
CNOT9-207ENST00000489687 COL14A1Q05707 1796 aaKnown RBP8.35□□□□□ -1.07
CNOT9-207ENST00000489687 NRKQ7Z2Y5 1582 aa8.35□□□□□ -1.07
CNOT9-207ENST00000489687 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
CNOT9-207ENST00000489687 BCL11AQ9H165 835 aa8.34□□□□□ -1.07
CNOT9-207ENST00000489687 A0A0G2JS52 829 aa8.33□□□□□ -1.08
CNOT9-207ENST00000489687 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
CNOT9-207ENST00000489687 L3MBTL2Q969R5 705 aa8.33□□□□□ -1.08
CNOT9-207ENST00000489687 NUDT16Q96DE0 195 aaKnown RBP8.33□□□□□ -1.08
CNOT9-207ENST00000489687 CDK19Q9BWU1 502 aa8.33□□□□□ -1.08
CNOT9-207ENST00000489687 FAM83GA6ND36 823 aa8.32□□□□□ -1.08
CNOT9-207ENST00000489687 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
CNOT9-207ENST00000489687 MIER1Q8N108 512 aa8.32□□□□□ -1.08
CNOT9-207ENST00000489687 PCGF6Q9BYE7 350 aa8.32□□□□□ -1.08
CNOT9-207ENST00000489687 CABP2Q9NPB3 220 aa8.32□□□□□ -1.08
CNOT9-207ENST00000489687 BTG4Q9NY30 223 aa8.32□□□□□ -1.08
CNOT9-207ENST00000489687 KIAA0232Q92628 1395 aa8.32□□□□□ -1.08
CNOT9-207ENST00000489687 CENPJQ9HC77 1338 aaPredicted RBP8.31□□□□□ -1.08
CNOT9-207ENST00000489687 PPIP5K1Q6PFW1 1433 aa8.31□□□□□ -1.08
CNOT9-207ENST00000489687 SRPK2P78362 688 aaKnown RBP8.31□□□□□ -1.08
CNOT9-207ENST00000489687 FAM98CQ17RN3 349 aaKnown RBP8.31□□□□□ -1.08
CNOT9-207ENST00000489687 FAM182BQ5T319 152 aa8.31□□□□□ -1.08
CNOT9-207ENST00000489687 SEPT12Q8IYM1 358 aa8.31□□□□□ -1.08
CNOT9-207ENST00000489687 SPDYE1Q8NFV5 336 aaPredicted RBP8.31□□□□□ -1.08
CNOT9-207ENST00000489687 AKT1S1Q96B36 256 aa8.31□□□□□ -1.08
CNOT9-207ENST00000489687 PIK3C2AO00443 1686 aa8.3□□□□□ -1.08
CNOT9-207ENST00000489687 THSD7AQ9UPZ6 1657 aa8.3□□□□□ -1.08
CNOT9-207ENST00000489687 ACEP12821 1306 aa8.3□□□□□ -1.08
CNOT9-207ENST00000489687 VPS72Q15906 364 aa8.3□□□□□ -1.08
CNOT9-207ENST00000489687 IFNLR1Q8IU57 520 aaPredicted RBP8.3□□□□□ -1.08
CNOT9-207ENST00000489687 PRDM11Q9NQV5 511 aa8.3□□□□□ -1.08
CNOT9-207ENST00000489687 POLR3AO14802 1390 aaPredicted RBP8.3□□□□□ -1.08
CNOT9-207ENST00000489687 ROCK2O75116 1388 aaKnown RBP8.3□□□□□ -1.08
CNOT9-207ENST00000489687 ZC3H6P61129 1189 aaKnown RBP8.29□□□□□ -1.08
CNOT9-207ENST00000489687 DEFB132Q7Z7B7 95 aa8.29□□□□□ -1.08
CNOT9-207ENST00000489687 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
CNOT9-207ENST00000489687 CLSPNQ9HAW4 1339 aa8.29□□□□□ -1.08
CNOT9-207ENST00000489687 LMO7Q8WWI1 1683 aa8.28□□□□□ -1.08
CNOT9-207ENST00000489687 ZBTB7CA1YPR0 619 aa8.28□□□□□ -1.08
CNOT9-207ENST00000489687 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-207ENST00000489687 STAC3Q96MF2 364 aa8.28□□□□□ -1.08
CNOT9-207ENST00000489687 TNS1Q9HBL0 1735 aaKnown RBP8.28□□□□□ -1.08
CNOT9-207ENST00000489687 BLMP54132 1417 aaPredicted RBP8.28□□□□□ -1.08
CNOT9-207ENST00000489687 CAMTA1Q9Y6Y1 1673 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms