RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 ACEP12821 1306 aa16.26■□□□□ 0.19
CEACAM1-212ENST00000488639 TERF2IPQ9NYB0 399 aa16.26■□□□□ 0.19
CEACAM1-212ENST00000488639 CPSF1Q10570 1443 aaKnown RBP16.26■□□□□ 0.19
CEACAM1-212ENST00000488639 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
CEACAM1-212ENST00000488639 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
CEACAM1-212ENST00000488639 FOXO3O43524 673 aa16.25■□□□□ 0.19
CEACAM1-212ENST00000488639 DSG3P32926 999 aa16.25■□□□□ 0.19
CEACAM1-212ENST00000488639 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
CEACAM1-212ENST00000488639 ANKRD36BQ8N2N9 1353 aa16.25■□□□□ 0.19
CEACAM1-212ENST00000488639 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
CEACAM1-212ENST00000488639 LRRC59Q96AG4 307 aaKnown RBP16.24■□□□□ 0.19
CEACAM1-212ENST00000488639 CD163L1Q9NR16 1453 aa16.23■□□□□ 0.19
CEACAM1-212ENST00000488639 KIF7Q2M1P5 1343 aa16.23■□□□□ 0.19
CEACAM1-212ENST00000488639 NRKQ7Z2Y5 1582 aa16.23■□□□□ 0.19
CEACAM1-212ENST00000488639 USP6P35125 1406 aa16.23■□□□□ 0.19
CEACAM1-212ENST00000488639 TMC1Q8TDI8 760 aa16.23■□□□□ 0.19
CEACAM1-212ENST00000488639 SHPRHQ149N8 1683 aa16.23■□□□□ 0.19
CEACAM1-212ENST00000488639 KRT28Q7Z3Y7 464 aa16.22■□□□□ 0.19
CEACAM1-212ENST00000488639 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
CEACAM1-212ENST00000488639 CCDC7Q96M83 1385 aa16.22■□□□□ 0.19
CEACAM1-212ENST00000488639 ALS2Q96Q42 1657 aa16.21■□□□□ 0.19
CEACAM1-212ENST00000488639 TNS3Q68CZ2 1445 aa16.21■□□□□ 0.19
CEACAM1-212ENST00000488639 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
CEACAM1-212ENST00000488639 ARHGEF10O15013 1369 aa16.21■□□□□ 0.19
CEACAM1-212ENST00000488639 KTN1Q86UP2 1357 aaKnown RBP16.21■□□□□ 0.19
CEACAM1-212ENST00000488639 COL22A1Q8NFW1 1626 aaPredicted RBP16.2■□□□□ 0.18
CEACAM1-212ENST00000488639 C11orf95C9JLR9 678 aaPredicted RBP16.2■□□□□ 0.18
CEACAM1-212ENST00000488639 HSPA1LP34931 641 aa16.2■□□□□ 0.18
CEACAM1-212ENST00000488639 A0A1W2PP64 1363 aa16.2■□□□□ 0.18
CEACAM1-212ENST00000488639 TTC21AQ8NDW8 1320 aa16.19■□□□□ 0.18
CEACAM1-212ENST00000488639 SSH2Q76I76 1423 aa16.19■□□□□ 0.18
CEACAM1-212ENST00000488639 JCADQ9P266 1359 aa16.19■□□□□ 0.18
CEACAM1-212ENST00000488639 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
CEACAM1-212ENST00000488639 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
CEACAM1-212ENST00000488639 USP54Q70EL1 1684 aa16.18■□□□□ 0.18
CEACAM1-212ENST00000488639 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
CEACAM1-212ENST00000488639 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
CEACAM1-212ENST00000488639 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
CEACAM1-212ENST00000488639 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
CEACAM1-212ENST00000488639 TTC21BQ7Z4L5 1316 aa16.15■□□□□ 0.18
CEACAM1-212ENST00000488639 PIK3C2AO00443 1686 aa16.14■□□□□ 0.18
CEACAM1-212ENST00000488639 PNPLA6Q8IY17 1366 aa16.14■□□□□ 0.17
CEACAM1-212ENST00000488639 XPCQ01831 940 aaPredicted RBP16.14■□□□□ 0.17
CEACAM1-212ENST00000488639 KIF20BQ96Q89 1820 aa16.14■□□□□ 0.17
CEACAM1-212ENST00000488639 PAK3O75914 559 aaPredicted RBP16.13■□□□□ 0.17
CEACAM1-212ENST00000488639 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
CEACAM1-212ENST00000488639 ABCA3Q99758 1704 aa16.12■□□□□ 0.17
CEACAM1-212ENST00000488639 CRYBG1Q9Y4K1 1723 aa16.12■□□□□ 0.17
CEACAM1-212ENST00000488639 ABCB7O75027 752 aa16.12■□□□□ 0.17
CEACAM1-212ENST00000488639 USP31Q70CQ4 1352 aa16.12■□□□□ 0.17
CEACAM1-212ENST00000488639 NSD3Q9BZ95 1437 aa16.11■□□□□ 0.17
CEACAM1-212ENST00000488639 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
CEACAM1-212ENST00000488639 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
CEACAM1-212ENST00000488639 ABTB2Q8N961 1025 aa16.11■□□□□ 0.17
CEACAM1-212ENST00000488639 PANK3Q9H999 370 aa16.11■□□□□ 0.17
CEACAM1-212ENST00000488639 CGNL1Q0VF96 1302 aa16.1■□□□□ 0.17
CEACAM1-212ENST00000488639 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
CEACAM1-212ENST00000488639 NSD2O96028 1365 aa16.1■□□□□ 0.17
CEACAM1-212ENST00000488639 PHRF1Q9P1Y6 1649 aaKnown RBP16.09■□□□□ 0.17
CEACAM1-212ENST00000488639 MARF1Q9Y4F3 1742 aaKnown RBP16.09■□□□□ 0.17
CEACAM1-212ENST00000488639 USP19O94966 1318 aa16.09■□□□□ 0.17
CEACAM1-212ENST00000488639 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
CEACAM1-212ENST00000488639 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
CEACAM1-212ENST00000488639 KNSTRNQ9Y448 316 aa16.08■□□□□ 0.16
CEACAM1-212ENST00000488639 SLIT3O75094 1523 aa16.08■□□□□ 0.16
CEACAM1-212ENST00000488639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.16
CEACAM1-212ENST00000488639 NPC1L1Q9UHC9 1359 aa16.07■□□□□ 0.16
CEACAM1-212ENST00000488639 OVOS2A0A0J9YW53 1432 aa16.06■□□□□ 0.16
CEACAM1-212ENST00000488639 OVOS2Q6IE36 1432 aa16.06■□□□□ 0.16
CEACAM1-212ENST00000488639 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
CEACAM1-212ENST00000488639 NLRP6P59044 892 aa16.06■□□□□ 0.16
CEACAM1-212ENST00000488639 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
CEACAM1-212ENST00000488639 PER1O15534 1290 aaPredicted RBP16.05■□□□□ 0.16
CEACAM1-212ENST00000488639 FYB1O15117 783 aa16.04■□□□□ 0.16
CEACAM1-212ENST00000488639 COG3Q96JB2 828 aa16.04■□□□□ 0.16
CEACAM1-212ENST00000488639 NME9Q86XW9 330 aa16.03■□□□□ 0.16
CEACAM1-212ENST00000488639 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
CEACAM1-212ENST00000488639 ABCC6O95255 1503 aa16.03■□□□□ 0.16
CEACAM1-212ENST00000488639 CPDO75976 1380 aa16.02■□□□□ 0.16
CEACAM1-212ENST00000488639 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.16
CEACAM1-212ENST00000488639 NFAT5O94916 1531 aa16.02■□□□□ 0.15
CEACAM1-212ENST00000488639 GCP02774 474 aa16.01■□□□□ 0.15
CEACAM1-212ENST00000488639 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
CEACAM1-212ENST00000488639 LRP6O75581 1613 aa16.01■□□□□ 0.15
CEACAM1-212ENST00000488639 COL14A1Q05707 1796 aaKnown RBP16■□□□□ 0.15
CEACAM1-212ENST00000488639 NUTM2GQ5VZR2 741 aa16■□□□□ 0.15
CEACAM1-212ENST00000488639 NWD2Q9ULI1 1742 aa15.99■□□□□ 0.15
CEACAM1-212ENST00000488639 LTN1O94822 1766 aa15.99■□□□□ 0.15
CEACAM1-212ENST00000488639 DDX10Q13206 875 aaKnown RBP15.98■□□□□ 0.15
CEACAM1-212ENST00000488639 CABLES1Q8TDN4 633 aa15.98■□□□□ 0.15
CEACAM1-212ENST00000488639 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
CEACAM1-212ENST00000488639 KIF24Q5T7B8 1368 aa15.98■□□□□ 0.15
CEACAM1-212ENST00000488639 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
CEACAM1-212ENST00000488639 NUTM2BA6NNL0 878 aaPredicted RBP15.97■□□□□ 0.15
CEACAM1-212ENST00000488639 NUTM2EB1AL46 878 aaPredicted RBP15.97■□□□□ 0.15
CEACAM1-212ENST00000488639 NUTM2AQ8IVF1 878 aaPredicted RBP15.97■□□□□ 0.15
CEACAM1-212ENST00000488639 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.97■□□□□ 0.15
CEACAM1-212ENST00000488639 PLCH1Q4KWH8 1693 aa15.96■□□□□ 0.15
CEACAM1-212ENST00000488639 POLA2Q14181 598 aa15.96■□□□□ 0.15
CEACAM1-212ENST00000488639 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms