RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 BCL9LQ86UU0 1499 aa22.59■■□□□ 1.21
CTDSP1-209ENST00000488627 ST20-MTHFSA0A0A6YYL1 179 aa22.58■■□□□ 1.21
CTDSP1-209ENST00000488627 ITSN1Q15811 1721 aa22.57■■□□□ 1.2
CTDSP1-209ENST00000488627 HAP1P54257 671 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-209ENST00000488627 ALS2Q96Q42 1657 aa22.56■■□□□ 1.2
CTDSP1-209ENST00000488627 FAM83GA6ND36 823 aa22.56■■□□□ 1.2
CTDSP1-209ENST00000488627 RBM6P78332 1123 aaKnown RBP22.56■■□□□ 1.2
CTDSP1-209ENST00000488627 ATAD2Q6PL18 1390 aa22.55■■□□□ 1.2
CTDSP1-209ENST00000488627 TRPC5Q9UL62 973 aaPredicted RBP22.55■■□□□ 1.2
CTDSP1-209ENST00000488627 SLIT2O94813 1529 aa22.55■■□□□ 1.2
CTDSP1-209ENST00000488627 NUTM2GQ5VZR2 741 aa22.54■■□□□ 1.2
CTDSP1-209ENST00000488627 ATRNO75882 1429 aa22.54■■□□□ 1.2
CTDSP1-209ENST00000488627 BRD4O60885 1362 aaPredicted RBP22.53■■□□□ 1.2
CTDSP1-209ENST00000488627 UNC5CLQ8IV45 518 aa22.53■■□□□ 1.2
CTDSP1-209ENST00000488627 PUS7Q96PZ0 661 aaKnown RBP22.53■■□□□ 1.2
CTDSP1-209ENST00000488627 USP6P35125 1406 aa22.53■■□□□ 1.2
CTDSP1-209ENST00000488627 SSH2Q76I76 1423 aa22.53■■□□□ 1.2
CTDSP1-209ENST00000488627 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
CTDSP1-209ENST00000488627 ZNF692Q9BU19 519 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-209ENST00000488627 CDK12Q9NYV4 1490 aaPredicted RBP22.51■■□□□ 1.19
CTDSP1-209ENST00000488627 USP47Q96K76 1375 aa22.5■■□□□ 1.19
CTDSP1-209ENST00000488627 CPSF1Q10570 1443 aaKnown RBP22.5■■□□□ 1.19
CTDSP1-209ENST00000488627 GJD4Q96KN9 370 aaPredicted RBP22.48■■□□□ 1.19
CTDSP1-209ENST00000488627 SLC12A5Q9H2X9 1139 aa22.48■■□□□ 1.19
CTDSP1-209ENST00000488627 USP19O94966 1318 aa22.48■■□□□ 1.19
CTDSP1-209ENST00000488627 SLC24A1O60721 1099 aa22.47■■□□□ 1.19
CTDSP1-209ENST00000488627 NLRP13Q86W25 1043 aa22.47■■□□□ 1.19
CTDSP1-209ENST00000488627 MARF1Q9Y4F3 1742 aaKnown RBP22.46■■□□□ 1.19
CTDSP1-209ENST00000488627 TTC21BQ7Z4L5 1316 aa22.46■■□□□ 1.19
CTDSP1-209ENST00000488627 ABCA3Q99758 1704 aa22.45■■□□□ 1.19
CTDSP1-209ENST00000488627 VPS72Q15906 364 aa22.45■■□□□ 1.18
CTDSP1-209ENST00000488627 RGS12O14924 1447 aa22.45■■□□□ 1.18
CTDSP1-209ENST00000488627 GCP02774 474 aa22.44■■□□□ 1.18
CTDSP1-209ENST00000488627 TMC1Q8TDI8 760 aa22.44■■□□□ 1.18
CTDSP1-209ENST00000488627 KIAA0232Q92628 1395 aa22.44■■□□□ 1.18
CTDSP1-209ENST00000488627 PRDM11Q9NQV5 511 aa22.44■■□□□ 1.18
CTDSP1-209ENST00000488627 CD163L1Q9NR16 1453 aa22.44■■□□□ 1.18
CTDSP1-209ENST00000488627 BTG4Q9NY30 223 aa22.44■■□□□ 1.18
CTDSP1-209ENST00000488627 CRYBG1Q9Y4K1 1723 aa22.43■■□□□ 1.18
CTDSP1-209ENST00000488627 NLRP6P59044 892 aa22.43■■□□□ 1.18
CTDSP1-209ENST00000488627 ZC3H6P61129 1189 aaKnown RBP22.43■■□□□ 1.18
CTDSP1-209ENST00000488627 KTN1Q86UP2 1357 aaKnown RBP22.42■■□□□ 1.18
CTDSP1-209ENST00000488627 CHRNA2Q15822 529 aa22.41■■□□□ 1.18
CTDSP1-209ENST00000488627 TTC21AQ8NDW8 1320 aa22.4■■□□□ 1.18
CTDSP1-209ENST00000488627 TMF1P82094 1093 aa22.4■■□□□ 1.18
CTDSP1-209ENST00000488627 CPDO75976 1380 aa22.39■■□□□ 1.18
CTDSP1-209ENST00000488627 ONECUT3O60422 494 aaPredicted RBP22.38■■□□□ 1.17
CTDSP1-209ENST00000488627 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.37■■□□□ 1.17
CTDSP1-209ENST00000488627 HDGFL2Q7Z4V5 671 aaPredicted RBP22.37■■□□□ 1.17
CTDSP1-209ENST00000488627 TERF2IPQ9NYB0 399 aa22.37■■□□□ 1.17
CTDSP1-209ENST00000488627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
CTDSP1-209ENST00000488627 A0A1W2PP64 1363 aa22.36■■□□□ 1.17
CTDSP1-209ENST00000488627 NINLQ9Y2I6 1382 aa22.36■■□□□ 1.17
CTDSP1-209ENST00000488627 GLI3P10071 1580 aa22.35■■□□□ 1.17
CTDSP1-209ENST00000488627 UPF1Q92900 1129 aaKnown RBP eCLIP22.35■■□□□ 1.173e-11■■■■■ 59.9
CTDSP1-209ENST00000488627 ZRANB1Q9UGI0 708 aa22.35■■□□□ 1.17
CTDSP1-209ENST00000488627 COL14A1Q05707 1796 aaKnown RBP22.35■■□□□ 1.17
CTDSP1-209ENST00000488627 PHRF1Q9P1Y6 1649 aaKnown RBP22.35■■□□□ 1.17
CTDSP1-209ENST00000488627 NWD2Q9ULI1 1742 aa22.34■■□□□ 1.17
CTDSP1-209ENST00000488627 NRKQ7Z2Y5 1582 aa22.34■■□□□ 1.17
CTDSP1-209ENST00000488627 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
CTDSP1-209ENST00000488627 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
CTDSP1-209ENST00000488627 SLIT3O75094 1523 aa22.33■■□□□ 1.17
CTDSP1-209ENST00000488627 NME9Q86XW9 330 aa22.33■■□□□ 1.17
CTDSP1-209ENST00000488627 USP31Q70CQ4 1352 aa22.33■■□□□ 1.17
CTDSP1-209ENST00000488627 PIK3C2AO00443 1686 aa22.33■■□□□ 1.16
CTDSP1-209ENST00000488627 AKAP12Q02952 1782 aa22.33■■□□□ 1.16
CTDSP1-209ENST00000488627 SPATA31A5Q5VU36 1347 aa22.32■■□□□ 1.16
CTDSP1-209ENST00000488627 SPATA31A7Q8IWB4 1347 aa22.32■■□□□ 1.16
CTDSP1-209ENST00000488627 EDC4Q6P2E9 1401 aaKnown RBP22.32■■□□□ 1.16
CTDSP1-209ENST00000488627 CDCA8Q53HL2 280 aa22.32■■□□□ 1.16
CTDSP1-209ENST00000488627 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
CTDSP1-209ENST00000488627 SEPT12Q8IYM1 358 aa22.31■■□□□ 1.16
CTDSP1-209ENST00000488627 HSPA5P11021 654 aaKnown RBP22.3■■□□□ 1.16
CTDSP1-209ENST00000488627 EIF4G2P78344 907 aaKnown RBP eCLIP22.3■■□□□ 1.16
CTDSP1-209ENST00000488627 KCNH5Q8NCM2 988 aa22.3■■□□□ 1.16
CTDSP1-209ENST00000488627 NRAPQ86VF7 1730 aa22.3■■□□□ 1.16
CTDSP1-209ENST00000488627 CAMTA1Q9Y6Y1 1673 aa22.3■■□□□ 1.16
CTDSP1-209ENST00000488627 AATKQ6ZMQ8 1374 aa22.29■■□□□ 1.16
CTDSP1-209ENST00000488627 STRN4Q9NRL3 753 aa22.29■■□□□ 1.16
CTDSP1-209ENST00000488627 SPATA31A1Q5TZJ5 1347 aa22.29■■□□□ 1.16
CTDSP1-209ENST00000488627 ANKRD36BQ8N2N9 1353 aa22.28■■□□□ 1.16
CTDSP1-209ENST00000488627 MON2Q7Z3U7 1717 aa22.28■■□□□ 1.16
CTDSP1-209ENST00000488627 EVA1CP58658 441 aa22.27■■□□□ 1.16
CTDSP1-209ENST00000488627 FAM98CQ17RN3 349 aaKnown RBP22.27■■□□□ 1.16
CTDSP1-209ENST00000488627 AXIN2Q9Y2T1 843 aa22.27■■□□□ 1.16
CTDSP1-209ENST00000488627 SOX12O15370 315 aa22.26■■□□□ 1.15
CTDSP1-209ENST00000488627 LARP1Q6PKG0 1096 aaKnown RBP22.26■■□□□ 1.15
CTDSP1-209ENST00000488627 LMO7Q8WWI1 1683 aa22.25■■□□□ 1.15
CTDSP1-209ENST00000488627 ZBTB7CA1YPR0 619 aa22.24■■□□□ 1.15
CTDSP1-209ENST00000488627 NFAT5O94916 1531 aa22.22■■□□□ 1.15
CTDSP1-209ENST00000488627 CARD14Q9BXL6 1004 aa22.22■■□□□ 1.15
CTDSP1-209ENST00000488627 OVOS2A0A0J9YW53 1432 aa22.22■■□□□ 1.15
CTDSP1-209ENST00000488627 OVOS2Q6IE36 1432 aa22.22■■□□□ 1.15
CTDSP1-209ENST00000488627 COL5A2P05997 1499 aaPredicted RBP22.22■■□□□ 1.15
CTDSP1-209ENST00000488627 FYB1O15117 783 aa22.2■■□□□ 1.14
CTDSP1-209ENST00000488627 BARGINQ6ZT62 677 aa22.2■■□□□ 1.14
CTDSP1-209ENST00000488627 KRT27Q7Z3Y8 459 aa22.2■■□□□ 1.14
CTDSP1-209ENST00000488627 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
CTDSP1-209ENST00000488627 TCP11L2Q8N4U5 519 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms