RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 PANK2Q9BZ23 570 aa18.03■□□□□ 0.48
RER1-207ENST00000488353 MINK1Q8N4C8 1332 aaPredicted RBP18.02■□□□□ 0.48
RER1-207ENST00000488353 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
RER1-207ENST00000488353 PRAM1Q96QH2 718 aa18.02■□□□□ 0.48
RER1-207ENST00000488353 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
RER1-207ENST00000488353 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
RER1-207ENST00000488353 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
RER1-207ENST00000488353 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
RER1-207ENST00000488353 ZMYM3Q14202 1370 aa18■□□□□ 0.47
RER1-207ENST00000488353 NINLQ9Y2I6 1382 aa18■□□□□ 0.47
RER1-207ENST00000488353 ARHGEF40Q8TER5 1519 aa17.99■□□□□ 0.47
RER1-207ENST00000488353 YTHDC2Q9H6S0 1430 aaKnown RBP17.99■□□□□ 0.47
RER1-207ENST00000488353 TCP11L2Q8N4U5 519 aa17.99■□□□□ 0.47
RER1-207ENST00000488353 GZF1Q9H116 711 aaPredicted RBP17.99■□□□□ 0.47
RER1-207ENST00000488353 PTPRMP28827 1452 aa17.99■□□□□ 0.47
RER1-207ENST00000488353 TRAK2O60296 914 aa17.98■□□□□ 0.47
RER1-207ENST00000488353 MTHFSP49914 203 aa17.98■□□□□ 0.47
RER1-207ENST00000488353 RUNDC1Q96C34 613 aa17.98■□□□□ 0.47
RER1-207ENST00000488353 BCL2L13Q9BXK5 485 aa17.98■□□□□ 0.47
RER1-207ENST00000488353 ESF1Q9H501 851 aaKnown RBP17.98■□□□□ 0.47
RER1-207ENST00000488353 MYH16Q9H6N6 1097 aa17.98■□□□□ 0.47
RER1-207ENST00000488353 ISY1Q9ULR0 285 aaKnown RBP17.98■□□□□ 0.47
RER1-207ENST00000488353 A2ML1A8K2U0 1454 aa17.98■□□□□ 0.47
RER1-207ENST00000488353 ALKQ9UM73 1620 aa17.97■□□□□ 0.47
RER1-207ENST00000488353 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
RER1-207ENST00000488353 TNNQ9UQP3 1299 aa17.97■□□□□ 0.47
RER1-207ENST00000488353 ANKRD36BQ8N2N9 1353 aa17.97■□□□□ 0.47
RER1-207ENST00000488353 SPATA31D1Q6ZQQ2 1576 aa17.97■□□□□ 0.47
RER1-207ENST00000488353 SHPRHQ149N8 1683 aa17.96■□□□□ 0.47
RER1-207ENST00000488353 ESPNB1AK53 854 aa17.96■□□□□ 0.47
RER1-207ENST00000488353 AAMPQ13685 434 aa17.96■□□□□ 0.47
RER1-207ENST00000488353 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
RER1-207ENST00000488353 CHMP5Q9NZZ3 219 aa17.96■□□□□ 0.47
RER1-207ENST00000488353 RIMS2Q9UQ26 1411 aa17.95■□□□□ 0.46
RER1-207ENST00000488353 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
RER1-207ENST00000488353 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
RER1-207ENST00000488353 PUS7Q96PZ0 661 aaKnown RBP17.94■□□□□ 0.46
RER1-207ENST00000488353 A0A1W2PP64 1363 aa17.94■□□□□ 0.46
RER1-207ENST00000488353 GRPEL1Q9HAV7 217 aa17.94■□□□□ 0.46
RER1-207ENST00000488353 WAPLQ7Z5K2 1190 aa17.93■□□□□ 0.46
RER1-207ENST00000488353 RLBP1P12271 317 aa17.92■□□□□ 0.46
RER1-207ENST00000488353 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
RER1-207ENST00000488353 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
RER1-207ENST00000488353 SPRYD3Q8NCJ5 442 aa17.91■□□□□ 0.46
RER1-207ENST00000488353 CDK19Q9BWU1 502 aa17.91■□□□□ 0.46
RER1-207ENST00000488353 USP32Q8NFA0 1604 aa17.9■□□□□ 0.46
RER1-207ENST00000488353 U2AF1L5P0DN76 240 aaPredicted RBP17.9■□□□□ 0.46
RER1-207ENST00000488353 U2AF1Q01081 240 aaKnown RBP eCLIP17.9■□□□□ 0.46
RER1-207ENST00000488353 TRIM44Q96DX7 344 aaPredicted RBP17.9■□□□□ 0.46
RER1-207ENST00000488353 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
RER1-207ENST00000488353 TPM2P07951 284 aa17.9■□□□□ 0.46
RER1-207ENST00000488353 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
RER1-207ENST00000488353 WDR63Q8IWG1 891 aa17.89■□□□□ 0.45
RER1-207ENST00000488353 ATAD2Q6PL18 1390 aa17.88■□□□□ 0.45
RER1-207ENST00000488353 PDZRN3Q9UPQ7 1066 aa17.88■□□□□ 0.45
RER1-207ENST00000488353 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
RER1-207ENST00000488353 PDCL3Q9H2J4 239 aa17.87■□□□□ 0.45
RER1-207ENST00000488353 CABP1Q9NZU7 370 aa17.87■□□□□ 0.45
RER1-207ENST00000488353 IQSEC2Q5JU85 1478 aa17.87■□□□□ 0.45
RER1-207ENST00000488353 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
RER1-207ENST00000488353 ABCC11Q96J66 1382 aa17.87■□□□□ 0.45
RER1-207ENST00000488353 CD163L1Q9NR16 1453 aa17.86■□□□□ 0.45
RER1-207ENST00000488353 C22orf23Q9BZE7 217 aa17.86■□□□□ 0.45
RER1-207ENST00000488353 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
RER1-207ENST00000488353 NSD2O96028 1365 aa17.85■□□□□ 0.45
RER1-207ENST00000488353 METP08581 1390 aa17.85■□□□□ 0.45
RER1-207ENST00000488353 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
RER1-207ENST00000488353 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
RER1-207ENST00000488353 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
RER1-207ENST00000488353 TNRQ92752 1358 aa17.84■□□□□ 0.45
RER1-207ENST00000488353 U2SURPO15042 1029 aaKnown RBP17.84■□□□□ 0.45
RER1-207ENST00000488353 FYB1O15117 783 aa17.84■□□□□ 0.45
RER1-207ENST00000488353 SETD1AO15047 1707 aaKnown RBP17.84■□□□□ 0.45
RER1-207ENST00000488353 TXNDC2Q86VQ3 553 aa17.83■□□□□ 0.45
RER1-207ENST00000488353 CEBPAP49715 358 aaPredicted RBP17.83■□□□□ 0.44
RER1-207ENST00000488353 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.44
RER1-207ENST00000488353 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
RER1-207ENST00000488353 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.82■□□□□ 0.44
RER1-207ENST00000488353 HDGFL2Q7Z4V5 671 aaPredicted RBP17.81■□□□□ 0.44
RER1-207ENST00000488353 HSCBQ8IWL3 235 aa17.81■□□□□ 0.44
RER1-207ENST00000488353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
RER1-207ENST00000488353 ZNF692Q9BU19 519 aaPredicted RBP17.8■□□□□ 0.44
RER1-207ENST00000488353 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
RER1-207ENST00000488353 SKOR2Q2VWA4 1001 aaPredicted RBP17.79■□□□□ 0.44
RER1-207ENST00000488353 FTSJ3Q8IY81 847 aaKnown RBP17.79■□□□□ 0.44
RER1-207ENST00000488353 FBLN1P23142 703 aa17.78■□□□□ 0.44
RER1-207ENST00000488353 MFAP1P55081 439 aaKnown RBP17.78■□□□□ 0.44
RER1-207ENST00000488353 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
RER1-207ENST00000488353 MVPQ14764 893 aaKnown RBP17.78■□□□□ 0.44
RER1-207ENST00000488353 ZKSCAN2Q63HK3 967 aa17.78■□□□□ 0.44
RER1-207ENST00000488353 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
RER1-207ENST00000488353 PTMSP20962 102 aa17.77■□□□□ 0.44
RER1-207ENST00000488353 TMEM2Q9UHN6 1383 aa17.77■□□□□ 0.44
RER1-207ENST00000488353 DDIT3P35638 169 aa17.77■□□□□ 0.43
RER1-207ENST00000488353 DZIP1LQ8IYY4 767 aaKnown RBP17.77■□□□□ 0.43
RER1-207ENST00000488353 SMC4Q9NTJ3 1288 aa17.77■□□□□ 0.43
RER1-207ENST00000488353 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
RER1-207ENST00000488353 KIAA1211Q6ZU35 1233 aa17.76■□□□□ 0.43
RER1-207ENST00000488353 GAS2L3Q86XJ1 694 aa17.76■□□□□ 0.43
RER1-207ENST00000488353 GBP4Q96PP9 640 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms