RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 IQGAP3Q86VI3 1631 aa15.43■□□□□ 0.06
HSPG2-211ENST00000486901 SMC5Q8IY18 1101 aa15.43■□□□□ 0.06
HSPG2-211ENST00000486901 PHF23Q9BUL5 403 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-211ENST00000486901 UNC13BO14795 1591 aa15.43■□□□□ 0.06
HSPG2-211ENST00000486901 FAM83GA6ND36 823 aa15.43■□□□□ 0.06
HSPG2-211ENST00000486901 SMARCA5O60264 1052 aaPredicted RBP15.43■□□□□ 0.06
HSPG2-211ENST00000486901 PHACTR3Q96KR7 559 aa15.43■□□□□ 0.06
HSPG2-211ENST00000486901 NINLQ9Y2I6 1382 aa15.43■□□□□ 0.06
HSPG2-211ENST00000486901 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
HSPG2-211ENST00000486901 NUTM2FA1L443 756 aa15.42■□□□□ 0.06
HSPG2-211ENST00000486901 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
HSPG2-211ENST00000486901 NASPP49321 788 aaPredicted RBP15.42■□□□□ 0.06
HSPG2-211ENST00000486901 NUCB1Q02818 461 aa15.42■□□□□ 0.06
HSPG2-211ENST00000486901 RNF214Q8ND24 703 aa15.42■□□□□ 0.06
HSPG2-211ENST00000486901 KIF2CQ99661 725 aa15.42■□□□□ 0.06
HSPG2-211ENST00000486901 KRT24Q2M2I5 525 aa15.42■□□□□ 0.06
HSPG2-211ENST00000486901 KIAA1211Q6ZU35 1233 aa15.42■□□□□ 0.06
HSPG2-211ENST00000486901 MYOM1P52179 1685 aa15.42■□□□□ 0.06
HSPG2-211ENST00000486901 HDAC1Q13547 482 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-211ENST00000486901 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
HSPG2-211ENST00000486901 PLCH2O75038 1416 aa15.4■□□□□ 0.06
HSPG2-211ENST00000486901 GLIPR1L2Q4G1C9 344 aa15.4■□□□□ 0.06
HSPG2-211ENST00000486901 TSHZ3Q63HK5 1081 aa15.4■□□□□ 0.06
HSPG2-211ENST00000486901 FAM13BQ9NYF5 915 aa15.4■□□□□ 0.06
HSPG2-211ENST00000486901 CLASP1Q7Z460 1538 aa15.4■□□□□ 0.06
HSPG2-211ENST00000486901 CD109Q6YHK3 1445 aa15.4■□□□□ 0.06
HSPG2-211ENST00000486901 KDM5AP29375 1690 aaKnown RBP15.4■□□□□ 0.06
HSPG2-211ENST00000486901 K7ELQ4 463 aaPredicted RBP15.39■□□□□ 0.05
HSPG2-211ENST00000486901 DIAPH1O60610 1272 aaKnown RBP15.39■□□□□ 0.05
HSPG2-211ENST00000486901 ZGPATQ8N5A5 531 aaKnown RBP15.39■□□□□ 0.05
HSPG2-211ENST00000486901 IQGAP1P46940 1657 aa15.39■□□□□ 0.05
HSPG2-211ENST00000486901 IPO8O15397 1037 aaKnown RBP15.39■□□□□ 0.05
HSPG2-211ENST00000486901 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
HSPG2-211ENST00000486901 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
HSPG2-211ENST00000486901 R3HCC1Q9Y3T6 440 aaKnown RBP15.39■□□□□ 0.05
HSPG2-211ENST00000486901 EVC2Q86UK5 1308 aa15.39■□□□□ 0.05
HSPG2-211ENST00000486901 PRPF40AO75400 957 aaKnown RBP15.39■□□□□ 0.05
HSPG2-211ENST00000486901 RAB3GAP1Q15042 981 aa15.39■□□□□ 0.05
HSPG2-211ENST00000486901 SIRT2Q8IXJ6 389 aa15.39■□□□□ 0.05
HSPG2-211ENST00000486901 PLEKHF1Q96S99 279 aa15.39■□□□□ 0.05
HSPG2-211ENST00000486901 AK9Q5TCS8 1911 aa15.38■□□□□ 0.05
HSPG2-211ENST00000486901 FYB1O15117 783 aa15.38■□□□□ 0.05
HSPG2-211ENST00000486901 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
HSPG2-211ENST00000486901 CABP1Q9NZU7 370 aa15.37■□□□□ 0.05
HSPG2-211ENST00000486901 ANP32BQ92688 251 aaKnown RBP15.37■□□□□ 0.05
HSPG2-211ENST00000486901 C14orf93Q9H972 538 aaKnown RBP15.37■□□□□ 0.05
HSPG2-211ENST00000486901 LAMC1P11047 1609 aa15.37■□□□□ 0.05
HSPG2-211ENST00000486901 BAG4O95429 457 aaKnown RBP15.37■□□□□ 0.05
HSPG2-211ENST00000486901 PRAM1Q96QH2 718 aa15.37■□□□□ 0.05
HSPG2-211ENST00000486901 CCDC27Q2M243 656 aa15.36■□□□□ 0.05
HSPG2-211ENST00000486901 GOLGA6L22H0YM25 854 aa15.36■□□□□ 0.05
HSPG2-211ENST00000486901 MSNP26038 577 aaKnown RBP15.36■□□□□ 0.05
HSPG2-211ENST00000486901 RBM25P49756 843 aaKnown RBP15.36■□□□□ 0.05
HSPG2-211ENST00000486901 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
HSPG2-211ENST00000486901 ZNF518AQ6AHZ1 1483 aa15.35■□□□□ 0.05
HSPG2-211ENST00000486901 GSPT1P15170 499 aaKnown RBP15.35■□□□□ 0.05
HSPG2-211ENST00000486901 CEP152O94986 1710 aa15.35■□□□□ 0.05
HSPG2-211ENST00000486901 ZBTB7BO15156 539 aaPredicted RBP15.35■□□□□ 0.05
HSPG2-211ENST00000486901 C8orf58Q8NAV2 365 aa15.35■□□□□ 0.05
HSPG2-211ENST00000486901 A0A1W2PP64 1363 aa15.34■□□□□ 0.05
HSPG2-211ENST00000486901 JARID2Q92833 1246 aaPredicted RBP15.34■□□□□ 0.05
HSPG2-211ENST00000486901 CALD1Q05682 793 aaKnown RBP15.34■□□□□ 0.05
HSPG2-211ENST00000486901 RRS1Q15050 365 aaKnown RBP15.34■□□□□ 0.05
HSPG2-211ENST00000486901 MIS18AQ9NYP9 233 aa15.34■□□□□ 0.05
HSPG2-211ENST00000486901 NCKAP5LQ9HCH0 1330 aa15.33■□□□□ 0.05
HSPG2-211ENST00000486901 NSFL1CQ9UNZ2 370 aaKnown RBP15.33■□□□□ 0.04
HSPG2-211ENST00000486901 KIF16BQ96L93 1317 aa15.33■□□□□ 0.04
HSPG2-211ENST00000486901 TRPM2O94759 1503 aa15.33■□□□□ 0.04
HSPG2-211ENST00000486901 DDIT3P35638 169 aa15.33■□□□□ 0.04
HSPG2-211ENST00000486901 PRIM1P49642 420 aaKnown RBP15.33■□□□□ 0.04
HSPG2-211ENST00000486901 AAMPQ13685 434 aa15.33■□□□□ 0.04
HSPG2-211ENST00000486901 BMP2KLQ5H9B9 411 aa15.33■□□□□ 0.04
HSPG2-211ENST00000486901 RBSNQ9H1K0 784 aa15.33■□□□□ 0.04
HSPG2-211ENST00000486901 GDPD2Q9HCC8 539 aa15.33■□□□□ 0.04
HSPG2-211ENST00000486901 PPIP5K1Q6PFW1 1433 aa15.32■□□□□ 0.04
HSPG2-211ENST00000486901 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
HSPG2-211ENST00000486901 RAPGEF3O95398 923 aa15.32■□□□□ 0.04
HSPG2-211ENST00000486901 WAPLQ7Z5K2 1190 aa15.32■□□□□ 0.04
HSPG2-211ENST00000486901 ABCA6Q8N139 1617 aa15.32■□□□□ 0.04
HSPG2-211ENST00000486901 SLC4A10Q6U841 1118 aa15.31■□□□□ 0.04
HSPG2-211ENST00000486901 SYCE3A1L190 88 aa15.31■□□□□ 0.04
HSPG2-211ENST00000486901 VAMP4O75379 141 aa15.31■□□□□ 0.04
HSPG2-211ENST00000486901 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
HSPG2-211ENST00000486901 MBIPQ9NS73 344 aa15.31■□□□□ 0.04
HSPG2-211ENST00000486901 TWISTNBQ3B726 338 aaPredicted RBP15.31■□□□□ 0.04
HSPG2-211ENST00000486901 SNX21Q969T3 373 aa15.31■□□□□ 0.04
HSPG2-211ENST00000486901 LARP6Q9BRS8 491 aaKnown RBP15.31■□□□□ 0.04
HSPG2-211ENST00000486901 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
HSPG2-211ENST00000486901 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
HSPG2-211ENST00000486901 RRP9O43818 475 aaKnown RBP15.3■□□□□ 0.04
HSPG2-211ENST00000486901 STAC3Q96MF2 364 aa15.3■□□□□ 0.04
HSPG2-211ENST00000486901 TSC1Q92574 1164 aa15.3■□□□□ 0.04
HSPG2-211ENST00000486901 FAM177BA6PVY3 158 aa15.29■□□□□ 0.04
HSPG2-211ENST00000486901 CDC45O75419 566 aa15.29■□□□□ 0.04
HSPG2-211ENST00000486901 ZSCAN23Q3MJ62 389 aa15.29■□□□□ 0.04
HSPG2-211ENST00000486901 PLCB2Q00722 1185 aa15.29■□□□□ 0.04
HSPG2-211ENST00000486901 IDI1Q13907 227 aa15.29■□□□□ 0.04
HSPG2-211ENST00000486901 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
HSPG2-211ENST00000486901 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
HSPG2-211ENST00000486901 SPHKAPQ2M3C7 1700 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms