RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ADAMTS2O95450 1211 aa19.81■□□□□ 0.76
POLR2J3-204ENST00000486319 LMOD2Q6P5Q4 547 aa19.81■□□□□ 0.76
POLR2J3-204ENST00000486319 CABP2Q9NPB3 220 aa19.81■□□□□ 0.76
POLR2J3-204ENST00000486319 PARD3Q8TEW0 1356 aa19.8■□□□□ 0.76
POLR2J3-204ENST00000486319 EVC2Q86UK5 1308 aa19.8■□□□□ 0.76
POLR2J3-204ENST00000486319 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
POLR2J3-204ENST00000486319 C8orf37Q96NL8 207 aa19.8■□□□□ 0.76
POLR2J3-204ENST00000486319 ATP7BP35670 1465 aa19.79■□□□□ 0.76
POLR2J3-204ENST00000486319 SBNO1A3KN83 1393 aa19.79■□□□□ 0.76
POLR2J3-204ENST00000486319 POTEAQ6S8J7 498 aa19.79■□□□□ 0.76
POLR2J3-204ENST00000486319 CCDC184Q52MB2 194 aa19.78■□□□□ 0.76
POLR2J3-204ENST00000486319 ZNF772Q68DY9 489 aaPredicted RBP19.78■□□□□ 0.76
POLR2J3-204ENST00000486319 CNGB1Q14028 1251 aaPredicted RBP19.77■□□□□ 0.76
POLR2J3-204ENST00000486319 KNSTRNQ9Y448 316 aa19.77■□□□□ 0.76
POLR2J3-204ENST00000486319 PLEKHG3A1L390 1219 aa19.76■□□□□ 0.75
POLR2J3-204ENST00000486319 NGLY1Q96IV0 654 aa19.76■□□□□ 0.75
POLR2J3-204ENST00000486319 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
POLR2J3-204ENST00000486319 PAK3O75914 559 aaPredicted RBP19.76■□□□□ 0.75
POLR2J3-204ENST00000486319 BRD4O60885 1362 aaPredicted RBP19.75■□□□□ 0.75
POLR2J3-204ENST00000486319 ACEP12821 1306 aa19.75■□□□□ 0.75
POLR2J3-204ENST00000486319 AFF2P51816 1311 aa19.75■□□□□ 0.75
POLR2J3-204ENST00000486319 ARHGEF10O15013 1369 aa19.75■□□□□ 0.75
POLR2J3-204ENST00000486319 NPC1L1Q9UHC9 1359 aa19.75■□□□□ 0.75
POLR2J3-204ENST00000486319 PLEKHG5O94827 1062 aa19.74■□□□□ 0.75
POLR2J3-204ENST00000486319 HAP1P54257 671 aaPredicted RBP19.74■□□□□ 0.75
POLR2J3-204ENST00000486319 CABP1Q9NZU7 370 aa19.73■□□□□ 0.75
POLR2J3-204ENST00000486319 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
POLR2J3-204ENST00000486319 COL22A1Q8NFW1 1626 aaPredicted RBP19.73■□□□□ 0.75
POLR2J3-204ENST00000486319 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
POLR2J3-204ENST00000486319 POLR3AO14802 1390 aaPredicted RBP19.72■□□□□ 0.75
POLR2J3-204ENST00000486319 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
POLR2J3-204ENST00000486319 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
POLR2J3-204ENST00000486319 TMC1Q8TDI8 760 aa19.71■□□□□ 0.75
POLR2J3-204ENST00000486319 NINLQ9Y2I6 1382 aa19.71■□□□□ 0.75
POLR2J3-204ENST00000486319 FAM9BQ8IZU0 186 aa19.71■□□□□ 0.75
POLR2J3-204ENST00000486319 SOCS7O14512 581 aa19.7■□□□□ 0.74
POLR2J3-204ENST00000486319 AMER1Q5JTC6 1135 aaPredicted RBP19.7■□□□□ 0.74
POLR2J3-204ENST00000486319 ITSN1Q15811 1721 aa19.69■□□□□ 0.74
POLR2J3-204ENST00000486319 FNBP4Q8N3X1 1017 aaPredicted RBP19.68■□□□□ 0.74
POLR2J3-204ENST00000486319 QTRT2Q9H974 415 aaKnown RBP19.68■□□□□ 0.74
POLR2J3-204ENST00000486319 USP21Q9UK80 565 aa19.68■□□□□ 0.74
POLR2J3-204ENST00000486319 ATAD2Q6PL18 1390 aa19.68■□□□□ 0.74
POLR2J3-204ENST00000486319 HNRNPUQ00839 825 aaKnown RBP eCLIP19.67■□□□□ 0.74
POLR2J3-204ENST00000486319 RXRBP28702 533 aa19.66■□□□□ 0.74
POLR2J3-204ENST00000486319 TOPAZ1Q8N9V7 1692 aa19.66■□□□□ 0.74
POLR2J3-204ENST00000486319 ABTB2Q8N961 1025 aa19.65■□□□□ 0.74
POLR2J3-204ENST00000486319 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
POLR2J3-204ENST00000486319 SLC12A5Q9H2X9 1139 aa19.65■□□□□ 0.74
POLR2J3-204ENST00000486319 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
POLR2J3-204ENST00000486319 NUTM2GQ5VZR2 741 aa19.64■□□□□ 0.73
POLR2J3-204ENST00000486319 CARD14Q9BXL6 1004 aa19.64■□□□□ 0.73
POLR2J3-204ENST00000486319 ANKRD36BQ8N2N9 1353 aa19.64■□□□□ 0.73
POLR2J3-204ENST00000486319 ZNF692Q9BU19 519 aaPredicted RBP19.63■□□□□ 0.73
POLR2J3-204ENST00000486319 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
POLR2J3-204ENST00000486319 NSD3Q9BZ95 1437 aa19.62■□□□□ 0.73
POLR2J3-204ENST00000486319 FAM83GA6ND36 823 aa19.61■□□□□ 0.73
POLR2J3-204ENST00000486319 RBM6P78332 1123 aaKnown RBP19.61■□□□□ 0.73
POLR2J3-204ENST00000486319 ALS2Q96Q42 1657 aa19.6■□□□□ 0.73
POLR2J3-204ENST00000486319 USP6P35125 1406 aa19.6■□□□□ 0.73
POLR2J3-204ENST00000486319 PPP2R1AP30153 589 aa19.59■□□□□ 0.73
POLR2J3-204ENST00000486319 UNC5CLQ8IV45 518 aa19.59■□□□□ 0.73
POLR2J3-204ENST00000486319 GTF3C3Q9Y5Q9 886 aa19.59■□□□□ 0.73
POLR2J3-204ENST00000486319 BCL9LQ86UU0 1499 aa19.59■□□□□ 0.73
POLR2J3-204ENST00000486319 TERF2IPQ9NYB0 399 aa19.57■□□□□ 0.72
POLR2J3-204ENST00000486319 NSD2O96028 1365 aa19.57■□□□□ 0.72
POLR2J3-204ENST00000486319 CGNL1Q0VF96 1302 aa19.57■□□□□ 0.72
POLR2J3-204ENST00000486319 ZBED9Q6R2W3 1325 aa19.57■□□□□ 0.72
POLR2J3-204ENST00000486319 NLRP6P59044 892 aa19.56■□□□□ 0.72
POLR2J3-204ENST00000486319 SLIT2O94813 1529 aa19.56■□□□□ 0.72
POLR2J3-204ENST00000486319 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
POLR2J3-204ENST00000486319 PRDM11Q9NQV5 511 aa19.56■□□□□ 0.72
POLR2J3-204ENST00000486319 CPSF1Q10570 1443 aaKnown RBP19.55■□□□□ 0.72
POLR2J3-204ENST00000486319 INSRP06213 1382 aa19.55■□□□□ 0.72
POLR2J3-204ENST00000486319 TTC21BQ7Z4L5 1316 aa19.55■□□□□ 0.72
POLR2J3-204ENST00000486319 ZC3H6P61129 1189 aaKnown RBP19.55■□□□□ 0.72
POLR2J3-204ENST00000486319 ATRNO75882 1429 aa19.55■□□□□ 0.72
POLR2J3-204ENST00000486319 SSH2Q76I76 1423 aa19.55■□□□□ 0.72
POLR2J3-204ENST00000486319 ANKRD26Q9UPS8 1709 aa19.55■□□□□ 0.72
POLR2J3-204ENST00000486319 A0A1W2PP64 1363 aa19.54■□□□□ 0.72
POLR2J3-204ENST00000486319 MARF1Q9Y4F3 1742 aaKnown RBP19.54■□□□□ 0.72
POLR2J3-204ENST00000486319 GJD4Q96KN9 370 aaPredicted RBP19.54■□□□□ 0.72
POLR2J3-204ENST00000486319 GCP02774 474 aa19.53■□□□□ 0.72
POLR2J3-204ENST00000486319 BTG4Q9NY30 223 aa19.53■□□□□ 0.72
POLR2J3-204ENST00000486319 CD163L1Q9NR16 1453 aa19.53■□□□□ 0.72
POLR2J3-204ENST00000486319 USP19O94966 1318 aa19.53■□□□□ 0.72
POLR2J3-204ENST00000486319 TTC21AQ8NDW8 1320 aa19.53■□□□□ 0.72
POLR2J3-204ENST00000486319 KIAA0232Q92628 1395 aa19.52■□□□□ 0.72
POLR2J3-204ENST00000486319 ABCA3Q99758 1704 aa19.52■□□□□ 0.71
POLR2J3-204ENST00000486319 KIF20BQ96Q89 1820 aa19.51■□□□□ 0.71
POLR2J3-204ENST00000486319 CCDC9Q9Y3X0 531 aaKnown RBP19.51■□□□□ 0.71
POLR2J3-204ENST00000486319 CDK12Q9NYV4 1490 aaPredicted RBP19.51■□□□□ 0.71
POLR2J3-204ENST00000486319 CHRNA2Q15822 529 aa19.51■□□□□ 0.71
POLR2J3-204ENST00000486319 VPS72Q15906 364 aa19.51■□□□□ 0.71
POLR2J3-204ENST00000486319 MORC1Q86VD1 984 aa19.51■□□□□ 0.71
POLR2J3-204ENST00000486319 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
POLR2J3-204ENST00000486319 AKAP12Q02952 1782 aa19.48■□□□□ 0.71
POLR2J3-204ENST00000486319 RGS12O14924 1447 aa19.47■□□□□ 0.71
POLR2J3-204ENST00000486319 MON2Q7Z3U7 1717 aa19.47■□□□□ 0.71
POLR2J3-204ENST00000486319 CRYBG1Q9Y4K1 1723 aa19.47■□□□□ 0.71
POLR2J3-204ENST00000486319 CPDO75976 1380 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms