RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 KIF7Q2M1P5 1343 aa15.76■□□□□ 0.11
NUP50-216ENST00000486184 NRKQ7Z2Y5 1582 aa15.76■□□□□ 0.11
NUP50-216ENST00000486184 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
NUP50-216ENST00000486184 LRRC59Q96AG4 307 aaKnown RBP15.76■□□□□ 0.11
NUP50-216ENST00000486184 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
NUP50-216ENST00000486184 LMOD2Q6P5Q4 547 aa15.75■□□□□ 0.11
NUP50-216ENST00000486184 ALS2Q96Q42 1657 aa15.75■□□□□ 0.11
NUP50-216ENST00000486184 USP6P35125 1406 aa15.75■□□□□ 0.11
NUP50-216ENST00000486184 TNS3Q68CZ2 1445 aa15.75■□□□□ 0.11
NUP50-216ENST00000486184 BRD4O60885 1362 aaPredicted RBP15.75■□□□□ 0.11
NUP50-216ENST00000486184 ANKRD36BQ8N2N9 1353 aa15.75■□□□□ 0.11
NUP50-216ENST00000486184 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
NUP50-216ENST00000486184 C11orf95C9JLR9 678 aaPredicted RBP15.74■□□□□ 0.11
NUP50-216ENST00000486184 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
NUP50-216ENST00000486184 CPSF1Q10570 1443 aaKnown RBP15.74■□□□□ 0.11
NUP50-216ENST00000486184 A0A1W2PP64 1363 aa15.74■□□□□ 0.11
NUP50-216ENST00000486184 SBNO1A3KN83 1393 aa15.74■□□□□ 0.11
NUP50-216ENST00000486184 KIF20BQ96Q89 1820 aa15.73■□□□□ 0.11
NUP50-216ENST00000486184 CD163L1Q9NR16 1453 aa15.73■□□□□ 0.11
NUP50-216ENST00000486184 JCADQ9P266 1359 aa15.73■□□□□ 0.11
NUP50-216ENST00000486184 ARHGEF10O15013 1369 aa15.72■□□□□ 0.11
NUP50-216ENST00000486184 COL22A1Q8NFW1 1626 aaPredicted RBP15.72■□□□□ 0.11
NUP50-216ENST00000486184 EDC4Q6P2E9 1401 aaKnown RBP15.71■□□□□ 0.11
NUP50-216ENST00000486184 SPATA31A3Q5VYP0 1347 aa15.7■□□□□ 0.1
NUP50-216ENST00000486184 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
NUP50-216ENST00000486184 PIK3C2AO00443 1686 aa15.7■□□□□ 0.1
NUP50-216ENST00000486184 TTC21AQ8NDW8 1320 aa15.69■□□□□ 0.1
NUP50-216ENST00000486184 ABCA3Q99758 1704 aa15.69■□□□□ 0.1
NUP50-216ENST00000486184 PNPLA6Q8IY17 1366 aa15.69■□□□□ 0.1
NUP50-216ENST00000486184 HAP1P54257 671 aaPredicted RBP15.68■□□□□ 0.1
NUP50-216ENST00000486184 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.68■□□□□ 0.1
NUP50-216ENST00000486184 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
NUP50-216ENST00000486184 MARF1Q9Y4F3 1742 aaKnown RBP15.68■□□□□ 0.1
NUP50-216ENST00000486184 TTC21BQ7Z4L5 1316 aa15.68■□□□□ 0.1
NUP50-216ENST00000486184 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
NUP50-216ENST00000486184 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
NUP50-216ENST00000486184 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
NUP50-216ENST00000486184 NSD3Q9BZ95 1437 aa15.67■□□□□ 0.1
NUP50-216ENST00000486184 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
NUP50-216ENST00000486184 ANKRD26Q9UPS8 1709 aa15.66■□□□□ 0.1
NUP50-216ENST00000486184 CRYBG1Q9Y4K1 1723 aa15.66■□□□□ 0.1
NUP50-216ENST00000486184 PANK3Q9H999 370 aa15.66■□□□□ 0.1
NUP50-216ENST00000486184 SSH2Q76I76 1423 aa15.66■□□□□ 0.1
NUP50-216ENST00000486184 USP54Q70EL1 1684 aa15.66■□□□□ 0.1
NUP50-216ENST00000486184 SPATA31A6Q5VVP1 1343 aa15.66■□□□□ 0.1
NUP50-216ENST00000486184 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
NUP50-216ENST00000486184 NUTM2GQ5VZR2 741 aa15.65■□□□□ 0.1
NUP50-216ENST00000486184 NLRP6P59044 892 aa15.64■□□□□ 0.09
NUP50-216ENST00000486184 NLRP13Q86W25 1043 aa15.64■□□□□ 0.09
NUP50-216ENST00000486184 NUTM2BA6NNL0 878 aaPredicted RBP15.63■□□□□ 0.09
NUP50-216ENST00000486184 NUTM2EB1AL46 878 aaPredicted RBP15.63■□□□□ 0.09
NUP50-216ENST00000486184 NUTM2AQ8IVF1 878 aaPredicted RBP15.63■□□□□ 0.09
NUP50-216ENST00000486184 KNSTRNQ9Y448 316 aa15.63■□□□□ 0.09
NUP50-216ENST00000486184 CGNL1Q0VF96 1302 aa15.63■□□□□ 0.09
NUP50-216ENST00000486184 NME9Q86XW9 330 aa15.62■□□□□ 0.09
NUP50-216ENST00000486184 MEX3CQ5U5Q3 659 aaKnown RBP15.61■□□□□ 0.09
NUP50-216ENST00000486184 CARD14Q9BXL6 1004 aa15.61■□□□□ 0.09
NUP50-216ENST00000486184 CABLES1Q8TDN4 633 aa15.6■□□□□ 0.09
NUP50-216ENST00000486184 COG3Q96JB2 828 aa15.6■□□□□ 0.09
NUP50-216ENST00000486184 LTN1O94822 1766 aa15.59■□□□□ 0.09
NUP50-216ENST00000486184 SLIT3O75094 1523 aa15.59■□□□□ 0.09
NUP50-216ENST00000486184 USP31Q70CQ4 1352 aa15.59■□□□□ 0.09
NUP50-216ENST00000486184 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.08
NUP50-216ENST00000486184 USP19O94966 1318 aa15.58■□□□□ 0.08
NUP50-216ENST00000486184 NSD2O96028 1365 aa15.58■□□□□ 0.08
NUP50-216ENST00000486184 LRP6O75581 1613 aa15.57■□□□□ 0.08
NUP50-216ENST00000486184 ADAMTS2O95450 1211 aa15.57■□□□□ 0.08
NUP50-216ENST00000486184 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
NUP50-216ENST00000486184 KCNH5Q8NCM2 988 aa15.57■□□□□ 0.08
NUP50-216ENST00000486184 OVOS2A0A0J9YW53 1432 aa15.57■□□□□ 0.08
NUP50-216ENST00000486184 OVOS2Q6IE36 1432 aa15.57■□□□□ 0.08
NUP50-216ENST00000486184 PLCH1Q4KWH8 1693 aa15.57■□□□□ 0.08
NUP50-216ENST00000486184 COL14A1Q05707 1796 aaKnown RBP15.57■□□□□ 0.08
NUP50-216ENST00000486184 FYB1O15117 783 aa15.56■□□□□ 0.08
NUP50-216ENST00000486184 SOX12O15370 315 aa15.56■□□□□ 0.08
NUP50-216ENST00000486184 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
NUP50-216ENST00000486184 MAP2P11137 1827 aaKnown RBP15.54■□□□□ 0.08
NUP50-216ENST00000486184 ZBTB7CA1YPR0 619 aa15.54■□□□□ 0.08
NUP50-216ENST00000486184 GCP02774 474 aa15.54■□□□□ 0.08
NUP50-216ENST00000486184 NWD2Q9ULI1 1742 aa15.54■□□□□ 0.08
NUP50-216ENST00000486184 NFAT5O94916 1531 aa15.53■□□□□ 0.08
NUP50-216ENST00000486184 ZC3H6P61129 1189 aaKnown RBP15.53■□□□□ 0.08
NUP50-216ENST00000486184 CNGB1Q14028 1251 aaPredicted RBP15.53■□□□□ 0.08
NUP50-216ENST00000486184 C8orf37Q96NL8 207 aa15.53■□□□□ 0.08
NUP50-216ENST00000486184 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
NUP50-216ENST00000486184 MORC1Q86VD1 984 aa15.52■□□□□ 0.08
NUP50-216ENST00000486184 RGPD5Q99666 1765 aa15.52■□□□□ 0.07
NUP50-216ENST00000486184 KIAA0232Q92628 1395 aa15.51■□□□□ 0.07
NUP50-216ENST00000486184 PER1O15534 1290 aaPredicted RBP15.51■□□□□ 0.07
NUP50-216ENST00000486184 CC2D1BQ5T0F9 858 aaKnown RBP15.51■□□□□ 0.07
NUP50-216ENST00000486184 NGLY1Q96IV0 654 aa15.51■□□□□ 0.07
NUP50-216ENST00000486184 CPDO75976 1380 aa15.5■□□□□ 0.07
NUP50-216ENST00000486184 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
NUP50-216ENST00000486184 NPC1L1Q9UHC9 1359 aa15.49■□□□□ 0.07
NUP50-216ENST00000486184 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.49■□□□□ 0.07
NUP50-216ENST00000486184 TNNT2P45379 298 aaPredicted RBP15.49■□□□□ 0.07
NUP50-216ENST00000486184 ABCC6O95255 1503 aa15.48■□□□□ 0.07
NUP50-216ENST00000486184 CHRNA2Q15822 529 aa15.48■□□□□ 0.07
NUP50-216ENST00000486184 NRAPQ86VF7 1730 aa15.48■□□□□ 0.07
NUP50-216ENST00000486184 LMO7Q8WWI1 1683 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms