RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 MARF1Q9Y4F3 1742 aaKnown RBP19.8■□□□□ 0.76
LRIF1-202ENST00000485275 CADPS2Q86UW7 1296 aa19.8■□□□□ 0.76
LRIF1-202ENST00000485275 NME9Q86XW9 330 aa19.8■□□□□ 0.76
LRIF1-202ENST00000485275 NGDNQ8NEJ9 315 aaKnown RBP19.8■□□□□ 0.76
LRIF1-202ENST00000485275 ZNF692Q9BU19 519 aaPredicted RBP19.8■□□□□ 0.76
LRIF1-202ENST00000485275 TTC21BQ7Z4L5 1316 aa19.79■□□□□ 0.76
LRIF1-202ENST00000485275 TRPM3Q9HCF6 1732 aaPredicted RBP19.79■□□□□ 0.76
LRIF1-202ENST00000485275 ZRANB1Q9UGI0 708 aa19.78■□□□□ 0.76
LRIF1-202ENST00000485275 PPP2R1AP30153 589 aa19.76■□□□□ 0.75
LRIF1-202ENST00000485275 OVOS2A0A0J9YW53 1432 aa19.76■□□□□ 0.75
LRIF1-202ENST00000485275 OVOS2Q6IE36 1432 aa19.76■□□□□ 0.75
LRIF1-202ENST00000485275 USP54Q70EL1 1684 aa19.75■□□□□ 0.75
LRIF1-202ENST00000485275 FOXO3O43524 673 aa19.74■□□□□ 0.75
LRIF1-202ENST00000485275 MORC1Q86VD1 984 aa19.74■□□□□ 0.75
LRIF1-202ENST00000485275 TNNT2P45379 298 aaPredicted RBP19.73■□□□□ 0.75
LRIF1-202ENST00000485275 NLRP13Q86W25 1043 aa19.73■□□□□ 0.75
LRIF1-202ENST00000485275 BRD4O60885 1362 aaPredicted RBP19.73■□□□□ 0.75
LRIF1-202ENST00000485275 XPCQ01831 940 aaPredicted RBP19.72■□□□□ 0.75
LRIF1-202ENST00000485275 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
LRIF1-202ENST00000485275 MRS2Q9HD23 443 aa19.72■□□□□ 0.75
LRIF1-202ENST00000485275 BRINP3Q76B58 766 aa19.72■□□□□ 0.75
LRIF1-202ENST00000485275 TTC21AQ8NDW8 1320 aa19.71■□□□□ 0.75
LRIF1-202ENST00000485275 ALS2Q96Q42 1657 aa19.71■□□□□ 0.75
LRIF1-202ENST00000485275 SLAIN2Q9P270 581 aa19.71■□□□□ 0.75
LRIF1-202ENST00000485275 PXDNQ92626 1479 aa19.71■□□□□ 0.75
LRIF1-202ENST00000485275 FBLN1P23142 703 aa19.7■□□□□ 0.74
LRIF1-202ENST00000485275 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
LRIF1-202ENST00000485275 USP31Q70CQ4 1352 aa19.68■□□□□ 0.74
LRIF1-202ENST00000485275 PSME1Q06323 249 aa19.67■□□□□ 0.74
LRIF1-202ENST00000485275 SHPRHQ149N8 1683 aa19.67■□□□□ 0.74
LRIF1-202ENST00000485275 ROBO1Q9Y6N7 1651 aa19.67■□□□□ 0.74
LRIF1-202ENST00000485275 MAP2P11137 1827 aaKnown RBP19.67■□□□□ 0.74
LRIF1-202ENST00000485275 PAK3O75914 559 aaPredicted RBP19.65■□□□□ 0.74
LRIF1-202ENST00000485275 NUTM2GQ5VZR2 741 aa19.65■□□□□ 0.74
LRIF1-202ENST00000485275 COG3Q96JB2 828 aa19.65■□□□□ 0.74
LRIF1-202ENST00000485275 KRT28Q7Z3Y7 464 aa19.65■□□□□ 0.74
LRIF1-202ENST00000485275 COL3A1P02461 1466 aaPredicted RBP19.65■□□□□ 0.74
LRIF1-202ENST00000485275 PEAK1Q9H792 1746 aa19.64■□□□□ 0.74
LRIF1-202ENST00000485275 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.74
LRIF1-202ENST00000485275 SMG6Q86US8 1419 aaKnown RBP19.64■□□□□ 0.73
LRIF1-202ENST00000485275 PNISRQ8TF01 805 aaKnown RBP19.64■□□□□ 0.73
LRIF1-202ENST00000485275 NPHP3Q7Z494 1330 aa19.64■□□□□ 0.73
LRIF1-202ENST00000485275 MTHFSP49914 203 aa19.63■□□□□ 0.73
LRIF1-202ENST00000485275 AATKQ6ZMQ8 1374 aa19.63■□□□□ 0.73
LRIF1-202ENST00000485275 CRYBG1Q9Y4K1 1723 aa19.63■□□□□ 0.73
LRIF1-202ENST00000485275 ABTB2Q8N961 1025 aa19.62■□□□□ 0.73
LRIF1-202ENST00000485275 YTHDC1Q96MU7 727 aaKnown RBP19.62■□□□□ 0.73
LRIF1-202ENST00000485275 NFAT5O94916 1531 aa19.61■□□□□ 0.73
LRIF1-202ENST00000485275 MED1Q15648 1581 aaPredicted RBP19.61■□□□□ 0.73
LRIF1-202ENST00000485275 NLRP6P59044 892 aa19.61■□□□□ 0.73
LRIF1-202ENST00000485275 POLKQ9UBT6 870 aa19.61■□□□□ 0.73
LRIF1-202ENST00000485275 SLIT3O75094 1523 aa19.61■□□□□ 0.73
LRIF1-202ENST00000485275 FAM9BQ8IZU0 186 aa19.6■□□□□ 0.73
LRIF1-202ENST00000485275 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
LRIF1-202ENST00000485275 SBNO1A3KN83 1393 aa19.6■□□□□ 0.73
LRIF1-202ENST00000485275 TNS3Q68CZ2 1445 aa19.6■□□□□ 0.73
LRIF1-202ENST00000485275 RRS1Q15050 365 aaKnown RBP19.6■□□□□ 0.73
LRIF1-202ENST00000485275 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
LRIF1-202ENST00000485275 SOS2Q07890 1332 aaPredicted RBP19.59■□□□□ 0.73
LRIF1-202ENST00000485275 AHDC1Q5TGY3 1603 aaPredicted RBP19.59■□□□□ 0.73
LRIF1-202ENST00000485275 SOX12O15370 315 aa19.58■□□□□ 0.73
LRIF1-202ENST00000485275 IQSEC2Q5JU85 1478 aa19.58■□□□□ 0.72
LRIF1-202ENST00000485275 CDK12Q9NYV4 1490 aaPredicted RBP19.58■□□□□ 0.72
LRIF1-202ENST00000485275 LTN1O94822 1766 aa19.58■□□□□ 0.72
LRIF1-202ENST00000485275 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.72
LRIF1-202ENST00000485275 USP19O94966 1318 aa19.57■□□□□ 0.72
LRIF1-202ENST00000485275 SPATA31A3Q5VYP0 1347 aa19.56■□□□□ 0.72
LRIF1-202ENST00000485275 ABCA3Q99758 1704 aa19.55■□□□□ 0.72
LRIF1-202ENST00000485275 MAP3K19Q56UN5 1328 aa19.54■□□□□ 0.72
LRIF1-202ENST00000485275 LMOD2Q6P5Q4 547 aa19.54■□□□□ 0.72
LRIF1-202ENST00000485275 INSRP06213 1382 aa19.54■□□□□ 0.72
LRIF1-202ENST00000485275 COL16A1Q07092 1604 aaPredicted RBP19.52■□□□□ 0.72
LRIF1-202ENST00000485275 PPM1GO15355 546 aaPredicted RBP19.52■□□□□ 0.71
LRIF1-202ENST00000485275 PLEKHG5O94827 1062 aa19.52■□□□□ 0.71
LRIF1-202ENST00000485275 BLMP54132 1417 aaPredicted RBP19.51■□□□□ 0.71
LRIF1-202ENST00000485275 CERKQ8TCT0 537 aa19.51■□□□□ 0.71
LRIF1-202ENST00000485275 ADAMTS8Q9UP79 889 aa19.51■□□□□ 0.71
LRIF1-202ENST00000485275 PHLPP1O60346 1717 aa19.51■□□□□ 0.71
LRIF1-202ENST00000485275 ARHGEF10O15013 1369 aa19.5■□□□□ 0.71
LRIF1-202ENST00000485275 CABLES1Q8TDN4 633 aa19.49■□□□□ 0.71
LRIF1-202ENST00000485275 UBAP1LF5GYI3 381 aa19.48■□□□□ 0.71
LRIF1-202ENST00000485275 TOM1O60784 492 aa19.48■□□□□ 0.71
LRIF1-202ENST00000485275 GCP02774 474 aa19.48■□□□□ 0.71
LRIF1-202ENST00000485275 PIP4K2BP78356 416 aa19.48■□□□□ 0.71
LRIF1-202ENST00000485275 CFAP53Q96M91 514 aa19.48■□□□□ 0.71
LRIF1-202ENST00000485275 RGPD1P0DJD0 1748 aa19.48■□□□□ 0.71
LRIF1-202ENST00000485275 FLT4P35916 1363 aa19.47■□□□□ 0.71
LRIF1-202ENST00000485275 SENP3-EIF4A1A0A087X0R7 540 aa19.47■□□□□ 0.71
LRIF1-202ENST00000485275 HSP90AB2PQ58FF8 381 aa19.47■□□□□ 0.71
LRIF1-202ENST00000485275 WDR43Q15061 677 aaKnown RBP eCLIP19.46■□□□□ 0.71
LRIF1-202ENST00000485275 COL22A1Q8NFW1 1626 aaPredicted RBP19.46■□□□□ 0.71
LRIF1-202ENST00000485275 KCNH5Q8NCM2 988 aa19.45■□□□□ 0.7
LRIF1-202ENST00000485275 COL18A1P39060 1754 aa19.45■□□□□ 0.7
LRIF1-202ENST00000485275 DIAPH1O60610 1272 aaKnown RBP19.44■□□□□ 0.7
LRIF1-202ENST00000485275 IL13P35225 146 aa19.44■□□□□ 0.7
LRIF1-202ENST00000485275 RGPD5Q99666 1765 aa19.44■□□□□ 0.7
LRIF1-202ENST00000485275 HOXC9P31274 260 aa19.44■□□□□ 0.7
LRIF1-202ENST00000485275 HNRNPUQ00839 825 aaKnown RBP eCLIP19.44■□□□□ 0.7
LRIF1-202ENST00000485275 ARHGEF25Q86VW2 580 aa19.44■□□□□ 0.7
LRIF1-202ENST00000485275 RTL1A6NKG5 1358 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms