RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
CDK13-205ENST00000484589 ITSN1Q15811 1721 aa11.75□□□□□ -0.53
CDK13-205ENST00000484589 IQSEC2Q5JU85 1478 aa11.75□□□□□ -0.53
CDK13-205ENST00000484589 ROBO1Q9Y6N7 1651 aa11.75□□□□□ -0.53
CDK13-205ENST00000484589 CPSF1Q10570 1443 aaKnown RBP11.75□□□□□ -0.53
CDK13-205ENST00000484589 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
CDK13-205ENST00000484589 PER1O15534 1290 aaPredicted RBP11.74□□□□□ -0.53
CDK13-205ENST00000484589 PDIA4P13667 645 aaKnown RBP11.74□□□□□ -0.53
CDK13-205ENST00000484589 CNGB1Q14028 1251 aaPredicted RBP11.74□□□□□ -0.53
CDK13-205ENST00000484589 PSME1Q06323 249 aa11.73□□□□□ -0.53
CDK13-205ENST00000484589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDK13-205ENST00000484589 KTN1Q86UP2 1357 aaKnown RBP11.73□□□□□ -0.53
CDK13-205ENST00000484589 ANKRD36BQ8N2N9 1353 aa11.73□□□□□ -0.53
CDK13-205ENST00000484589 FKBP8Q14318 412 aa11.72□□□□□ -0.53
CDK13-205ENST00000484589 TERF2IPQ9NYB0 399 aa11.72□□□□□ -0.53
CDK13-205ENST00000484589 NINLQ9Y2I6 1382 aa11.72□□□□□ -0.53
CDK13-205ENST00000484589 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
CDK13-205ENST00000484589 AKAP12Q02952 1782 aa11.71□□□□□ -0.53
CDK13-205ENST00000484589 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
CDK13-205ENST00000484589 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
CDK13-205ENST00000484589 USP6P35125 1406 aa11.71□□□□□ -0.54
CDK13-205ENST00000484589 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.54
CDK13-205ENST00000484589 SSH2Q76I76 1423 aa11.7□□□□□ -0.54
CDK13-205ENST00000484589 NSD3Q9BZ95 1437 aa11.7□□□□□ -0.54
CDK13-205ENST00000484589 NUTM2GQ5VZR2 741 aa11.7□□□□□ -0.54
CDK13-205ENST00000484589 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
CDK13-205ENST00000484589 NPHP3Q7Z494 1330 aa11.7□□□□□ -0.54
CDK13-205ENST00000484589 KIF1AQ12756 1690 aa11.7□□□□□ -0.54
CDK13-205ENST00000484589 PXDNQ92626 1479 aa11.7□□□□□ -0.54
CDK13-205ENST00000484589 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
CDK13-205ENST00000484589 NME9Q86XW9 330 aa11.69□□□□□ -0.54
CDK13-205ENST00000484589 TTC21BQ7Z4L5 1316 aa11.69□□□□□ -0.54
CDK13-205ENST00000484589 SOS2Q07890 1332 aaPredicted RBP11.69□□□□□ -0.54
CDK13-205ENST00000484589 FYB1O15117 783 aa11.68□□□□□ -0.54
CDK13-205ENST00000484589 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
CDK13-205ENST00000484589 LMOD2Q6P5Q4 547 aa11.68□□□□□ -0.54
CDK13-205ENST00000484589 GGNBP2Q9H3C7 697 aa11.68□□□□□ -0.54
CDK13-205ENST00000484589 KNSTRNQ9Y448 316 aa11.68□□□□□ -0.54
CDK13-205ENST00000484589 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
CDK13-205ENST00000484589 EDC4Q6P2E9 1401 aaKnown RBP11.67□□□□□ -0.54
CDK13-205ENST00000484589 FBLN1P23142 703 aa11.67□□□□□ -0.54
CDK13-205ENST00000484589 CC2D1BQ5T0F9 858 aaKnown RBP11.67□□□□□ -0.54
CDK13-205ENST00000484589 TRPM3Q9HCF6 1732 aaPredicted RBP11.67□□□□□ -0.54
CDK13-205ENST00000484589 HSPA1LP34931 641 aa11.66□□□□□ -0.54
CDK13-205ENST00000484589 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
CDK13-205ENST00000484589 SPATA31A3Q5VYP0 1347 aa11.66□□□□□ -0.54
CDK13-205ENST00000484589 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
CDK13-205ENST00000484589 AHDC1Q5TGY3 1603 aaPredicted RBP11.65□□□□□ -0.54
CDK13-205ENST00000484589 PHLPP1O60346 1717 aa11.65□□□□□ -0.54
CDK13-205ENST00000484589 PIK3C2AO00443 1686 aa11.65□□□□□ -0.55
CDK13-205ENST00000484589 CHMP4AQ9BY43 222 aa11.65□□□□□ -0.55
CDK13-205ENST00000484589 NLRP6P59044 892 aa11.64□□□□□ -0.55
CDK13-205ENST00000484589 CGNL1Q0VF96 1302 aa11.64□□□□□ -0.55
CDK13-205ENST00000484589 COL16A1Q07092 1604 aaPredicted RBP11.64□□□□□ -0.55
CDK13-205ENST00000484589 SOX12O15370 315 aa11.63□□□□□ -0.55
CDK13-205ENST00000484589 TNNT2P45379 298 aaPredicted RBP11.63□□□□□ -0.55
CDK13-205ENST00000484589 SBNO1A3KN83 1393 aa11.63□□□□□ -0.55
CDK13-205ENST00000484589 ALS2Q96Q42 1657 aa11.63□□□□□ -0.55
CDK13-205ENST00000484589 DIEXFQ68CQ4 756 aaKnown RBP11.63□□□□□ -0.55
CDK13-205ENST00000484589 TNS3Q68CZ2 1445 aa11.63□□□□□ -0.55
CDK13-205ENST00000484589 TTC21AQ8NDW8 1320 aa11.63□□□□□ -0.55
CDK13-205ENST00000484589 ADRA2BP18089 450 aa11.62□□□□□ -0.55
CDK13-205ENST00000484589 UBE2Q2Q8WVN8 375 aa11.62□□□□□ -0.55
CDK13-205ENST00000484589 LRRC59Q96AG4 307 aaKnown RBP11.62□□□□□ -0.55
CDK13-205ENST00000484589 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
CDK13-205ENST00000484589 KIF20BQ96Q89 1820 aa11.61□□□□□ -0.55
CDK13-205ENST00000484589 FBXO41Q8TF61 875 aa11.61□□□□□ -0.55
CDK13-205ENST00000484589 OVOS2A0A0J9YW53 1432 aa11.6□□□□□ -0.55
CDK13-205ENST00000484589 OVOS2Q6IE36 1432 aa11.6□□□□□ -0.55
CDK13-205ENST00000484589 MED1Q15648 1581 aaPredicted RBP11.6□□□□□ -0.55
CDK13-205ENST00000484589 COG3Q96JB2 828 aa11.6□□□□□ -0.55
CDK13-205ENST00000484589 BRD4O60885 1362 aaPredicted RBP11.59□□□□□ -0.55
CDK13-205ENST00000484589 PNPLA6Q8IY17 1366 aa11.59□□□□□ -0.55
CDK13-205ENST00000484589 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
CDK13-205ENST00000484589 NLRP13Q86W25 1043 aa11.59□□□□□ -0.55
CDK13-205ENST00000484589 USP31Q70CQ4 1352 aa11.59□□□□□ -0.55
CDK13-205ENST00000484589 PRKRIP1Q9H875 184 aaPredicted RBP11.59□□□□□ -0.55
CDK13-205ENST00000484589 GCP02774 474 aa11.58□□□□□ -0.56
CDK13-205ENST00000484589 RRS1Q15050 365 aaKnown RBP11.58□□□□□ -0.56
CDK13-205ENST00000484589 ARHGEF10O15013 1369 aa11.58□□□□□ -0.56
CDK13-205ENST00000484589 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
CDK13-205ENST00000484589 USP19O94966 1318 aa11.58□□□□□ -0.56
CDK13-205ENST00000484589 CDK11BP21127 795 aaKnown RBP11.57□□□□□ -0.56
CDK13-205ENST00000484589 ZC3H6P61129 1189 aaKnown RBP11.57□□□□□ -0.56
CDK13-205ENST00000484589 PARD3Q8TEW0 1356 aa11.57□□□□□ -0.56
CDK13-205ENST00000484589 NUTM2BA6NNL0 878 aaPredicted RBP11.56□□□□□ -0.56
CDK13-205ENST00000484589 NUTM2EB1AL46 878 aaPredicted RBP11.56□□□□□ -0.56
CDK13-205ENST00000484589 NUTM2AQ8IVF1 878 aaPredicted RBP11.56□□□□□ -0.56
CDK13-205ENST00000484589 ANKRD26Q9UPS8 1709 aa11.56□□□□□ -0.56
CDK13-205ENST00000484589 CRYBG1Q9Y4K1 1723 aa11.56□□□□□ -0.56
CDK13-205ENST00000484589 NSD2O96028 1365 aa11.56□□□□□ -0.56
CDK13-205ENST00000484589 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
CDK13-205ENST00000484589 MIER1Q8N108 512 aa11.56□□□□□ -0.56
CDK13-205ENST00000484589 EMILIN1Q9Y6C2 1016 aa11.56□□□□□ -0.56
CDK13-205ENST00000484589 MAP2P11137 1827 aaKnown RBP11.55□□□□□ -0.56
CDK13-205ENST00000484589 JCADQ9P266 1359 aa11.55□□□□□ -0.56
CDK13-205ENST00000484589 ZBTB7CA1YPR0 619 aa11.55□□□□□ -0.56
CDK13-205ENST00000484589 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
CDK13-205ENST00000484589 USP54Q70EL1 1684 aa11.55□□□□□ -0.56
CDK13-205ENST00000484589 PPM1GO15355 546 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms