RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 SIRT1Q96EB6 747 aa14.05□□□□□ -0.16
TTC3-218ENST00000484047 MKRN1Q9UHC7 482 aaKnown RBP14.05□□□□□ -0.16
TTC3-218ENST00000484047 PTK7Q13308 1070 aa14.04□□□□□ -0.16
TTC3-218ENST00000484047 BCL2L13Q9BXK5 485 aa14.04□□□□□ -0.16
TTC3-218ENST00000484047 ATP6V1AP38606 617 aa14.03□□□□□ -0.16
TTC3-218ENST00000484047 CFHP08603 1231 aa14.03□□□□□ -0.16
TTC3-218ENST00000484047 RETREG3Q86VR2 466 aa14.03□□□□□ -0.16
TTC3-218ENST00000484047 KCNK17Q96T54 332 aa14.03□□□□□ -0.16
TTC3-218ENST00000484047 POTEIP0CG38 1075 aa14.02□□□□□ -0.16
TTC3-218ENST00000484047 CLP1Q92989 425 aaKnown RBP14.02□□□□□ -0.16
TTC3-218ENST00000484047 SEPT9Q9UHD8 586 aaPredicted RBP14.02□□□□□ -0.17
TTC3-218ENST00000484047 MARSP56192 900 aaKnown RBP14.01□□□□□ -0.17
TTC3-218ENST00000484047 DESI1Q6ICB0 168 aa14.01□□□□□ -0.17
TTC3-218ENST00000484047 GIPC2Q8TF65 315 aa14.01□□□□□ -0.17
TTC3-218ENST00000484047 RASA1P20936 1047 aa14□□□□□ -0.17
TTC3-218ENST00000484047 NCOA4Q13772 614 aa14□□□□□ -0.17
TTC3-218ENST00000484047 LYPD8Q6UX82 237 aa14□□□□□ -0.17
TTC3-218ENST00000484047 FAM200AQ8TCP9 573 aa14□□□□□ -0.17
TTC3-218ENST00000484047 ZBED2Q9BTP6 218 aa13.99□□□□□ -0.17
TTC3-218ENST00000484047 ATP2B4P23634 1241 aa13.98□□□□□ -0.17
TTC3-218ENST00000484047 FKBPLQ9UIM3 349 aa13.98□□□□□ -0.17
TTC3-218ENST00000484047 LARP1Q6PKG0 1096 aaKnown RBP13.97□□□□□ -0.17
TTC3-218ENST00000484047 NPAS4Q8IUM7 802 aa13.96□□□□□ -0.17
TTC3-218ENST00000484047 CDCA7Q9BWT1 371 aaPredicted RBP13.96□□□□□ -0.18
TTC3-218ENST00000484047 BIN2Q9UBW5 565 aaPredicted RBP13.96□□□□□ -0.18
TTC3-218ENST00000484047 ANKRD33BA6NCL7 494 aa13.95□□□□□ -0.18
TTC3-218ENST00000484047 TCF3P15923 654 aa13.95□□□□□ -0.18
TTC3-218ENST00000484047 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
TTC3-218ENST00000484047 ANKMY2Q8IV38 441 aa13.94□□□□□ -0.18
TTC3-218ENST00000484047 SLC27A5Q9Y2P5 690 aa13.94□□□□□ -0.18
TTC3-218ENST00000484047 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
TTC3-218ENST00000484047 KCNH2Q12809 1159 aa13.94□□□□□ -0.18
TTC3-218ENST00000484047 PUS10Q3MIT2 529 aaKnown RBP13.94□□□□□ -0.18
TTC3-218ENST00000484047 ATP5J2-PTCD1G3V325 749 aa13.93□□□□□ -0.18
TTC3-218ENST00000484047 MORN1Q5T089 497 aa13.93□□□□□ -0.18
TTC3-218ENST00000484047 HDGFP51858 240 aaKnown RBP13.92□□□□□ -0.18
TTC3-218ENST00000484047 CEP126Q9P2H0 1117 aa13.92□□□□□ -0.18
TTC3-218ENST00000484047 DPYDQ12882 1025 aa13.92□□□□□ -0.18
TTC3-218ENST00000484047 SAMD7Q7Z3H4 446 aa13.92□□□□□ -0.18
TTC3-218ENST00000484047 MAP10Q9P2G4 905 aa13.91□□□□□ -0.18
TTC3-218ENST00000484047 RABGEF1Q9UJ41 708 aa13.91□□□□□ -0.18
TTC3-218ENST00000484047 F12P00748 615 aaPredicted RBP13.9□□□□□ -0.18
TTC3-218ENST00000484047 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
TTC3-218ENST00000484047 PHTF2Q8N3S3 785 aa13.9□□□□□ -0.18
TTC3-218ENST00000484047 SLC4A3P48751 1232 aa13.9□□□□□ -0.18
TTC3-218ENST00000484047 SLFNL1Q499Z3 407 aa13.9□□□□□ -0.18
TTC3-218ENST00000484047 PLPP7Q8NBV4 271 aa13.9□□□□□ -0.18
TTC3-218ENST00000484047 CLDN10P78369 228 aa13.89□□□□□ -0.19
TTC3-218ENST00000484047 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
TTC3-218ENST00000484047 ZNF594Q96JF6 807 aaPredicted RBP13.89□□□□□ -0.19
TTC3-218ENST00000484047 PSEN2P49810 448 aa13.88□□□□□ -0.19
TTC3-218ENST00000484047 SWI5Q1ZZU3 235 aa13.88□□□□□ -0.19
TTC3-218ENST00000484047 RNF19BQ6ZMZ0 732 aa13.88□□□□□ -0.19
TTC3-218ENST00000484047 RNF40O75150 1001 aa13.88□□□□□ -0.19
TTC3-218ENST00000484047 TAGLNQ01995 201 aaKnown RBP13.88□□□□□ -0.19
TTC3-218ENST00000484047 RNF135Q8IUD6 432 aa13.88□□□□□ -0.19
TTC3-218ENST00000484047 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
TTC3-218ENST00000484047 FAM98CQ17RN3 349 aaKnown RBP13.87□□□□□ -0.19
TTC3-218ENST00000484047 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
TTC3-218ENST00000484047 Q3C1V9 767 aa13.86□□□□□ -0.19
TTC3-218ENST00000484047 BLOC1S3Q6QNY0 202 aa13.86□□□□□ -0.19
TTC3-218ENST00000484047 OCSTAMPQ9BR26 566 aa13.86□□□□□ -0.19
TTC3-218ENST00000484047 C1orf216Q8TAB5 229 aa13.85□□□□□ -0.19
TTC3-218ENST00000484047 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
TTC3-218ENST00000484047 TSGA10IPQ3SY00 556 aa13.84□□□□□ -0.19
TTC3-218ENST00000484047 KCNH8Q96L42 1107 aa13.84□□□□□ -0.19
TTC3-218ENST00000484047 PRMT3O60678 531 aa13.83□□□□□ -0.2
TTC3-218ENST00000484047 CHIC2Q9UKJ5 165 aa13.83□□□□□ -0.2
TTC3-218ENST00000484047 ABL1P00519 1130 aa13.82□□□□□ -0.2
TTC3-218ENST00000484047 ZNF211Q13398 564 aaPredicted RBP13.82□□□□□ -0.2
TTC3-218ENST00000484047 ZNF326Q5BKZ1 582 aaKnown RBP13.82□□□□□ -0.2
TTC3-218ENST00000484047 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
TTC3-218ENST00000484047 DKK1O94907 266 aa13.82□□□□□ -0.2
TTC3-218ENST00000484047 KMT5BQ4FZB7 885 aa13.82□□□□□ -0.2
TTC3-218ENST00000484047 FBXO33Q7Z6M2 555 aa13.82□□□□□ -0.2
TTC3-218ENST00000484047 USB1Q9BQ65 265 aaKnown RBP13.82□□□□□ -0.2
TTC3-218ENST00000484047 ANO2Q9NQ90 1003 aa13.82□□□□□ -0.2
TTC3-218ENST00000484047 LZTS3O60299 673 aaPredicted RBP13.81□□□□□ -0.2
TTC3-218ENST00000484047 EML3Q32P44 896 aa13.81□□□□□ -0.2
TTC3-218ENST00000484047 KIAA1024Q9UPX6 916 aa13.81□□□□□ -0.2
TTC3-218ENST00000484047 PCDHB9Q9Y5E1 797 aa13.81□□□□□ -0.2
TTC3-218ENST00000484047 H3BRB1 525 aa13.8□□□□□ -0.2
TTC3-218ENST00000484047 VAMP1P23763 118 aa13.8□□□□□ -0.2
TTC3-218ENST00000484047 OCLNQ16625 522 aa13.8□□□□□ -0.2
TTC3-218ENST00000484047 TUT1Q9H6E5 874 aaKnown RBP13.8□□□□□ -0.2
TTC3-218ENST00000484047 CDK11BP21127 795 aaKnown RBP13.8□□□□□ -0.2
TTC3-218ENST00000484047 DNAAF2Q9NVR5 837 aaKnown RBP13.8□□□□□ -0.2
TTC3-218ENST00000484047 CDK11AQ9UQ88 783 aaPredicted RBP13.8□□□□□ -0.2
TTC3-218ENST00000484047 ACTN4O43707 911 aaKnown RBP13.79□□□□□ -0.2
TTC3-218ENST00000484047 TAS1R3Q7RTX0 852 aa13.78□□□□□ -0.2
TTC3-218ENST00000484047 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
TTC3-218ENST00000484047 C8orf37Q96NL8 207 aa13.78□□□□□ -0.2
TTC3-218ENST00000484047 EGFL7Q9UHF1 273 aa13.78□□□□□ -0.2
TTC3-218ENST00000484047 RECKO95980 971 aa13.78□□□□□ -0.2
TTC3-218ENST00000484047 HOXB1P14653 301 aaPredicted RBP13.78□□□□□ -0.2
TTC3-218ENST00000484047 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
TTC3-218ENST00000484047 CTHP32929 405 aa13.76□□□□□ -0.21
TTC3-218ENST00000484047 PTPRNQ16849 979 aa13.76□□□□□ -0.21
TTC3-218ENST00000484047 MAP7D1Q3KQU3 841 aa13.76□□□□□ -0.21
TTC3-218ENST00000484047 BRICD5Q6PL45 260 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms