RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
ATG4B-220ENST00000482507 TBX22Q9Y458 520 aa19.23■□□□□ 0.67
ATG4B-220ENST00000482507 MTHFSP49914 203 aa19.22■□□□□ 0.67
ATG4B-220ENST00000482507 USP35Q9P2H5 1018 aa19.22■□□□□ 0.67
ATG4B-220ENST00000482507 RBM33Q96EV2 1170 aaKnown RBP19.21■□□□□ 0.67
ATG4B-220ENST00000482507 CGNL1Q0VF96 1302 aa19.21■□□□□ 0.67
ATG4B-220ENST00000482507 TNNQ9UQP3 1299 aa19.21■□□□□ 0.67
ATG4B-220ENST00000482507 TULP4Q9NRJ4 1543 aa19.21■□□□□ 0.67
ATG4B-220ENST00000482507 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
ATG4B-220ENST00000482507 PTPRUQ92729 1446 aa19.2■□□□□ 0.66
ATG4B-220ENST00000482507 CLUAP1Q96AJ1 413 aa19.2■□□□□ 0.66
ATG4B-220ENST00000482507 CABP2Q9NPB3 220 aa19.2■□□□□ 0.66
ATG4B-220ENST00000482507 RARSP54136 660 aaKnown RBP19.2■□□□□ 0.66
ATG4B-220ENST00000482507 ABCC11Q96J66 1382 aa19.19■□□□□ 0.66
ATG4B-220ENST00000482507 ZNF142P52746 1687 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-220ENST00000482507 FRAT1Q92837 279 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-220ENST00000482507 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
ATG4B-220ENST00000482507 MED14O60244 1454 aa19.18■□□□□ 0.66
ATG4B-220ENST00000482507 RLBP1P12271 317 aa19.17■□□□□ 0.66
ATG4B-220ENST00000482507 KCNA6P17658 529 aa19.17■□□□□ 0.66
ATG4B-220ENST00000482507 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
ATG4B-220ENST00000482507 SETD1AO15047 1707 aaKnown RBP19.17■□□□□ 0.66
ATG4B-220ENST00000482507 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
ATG4B-220ENST00000482507 ARHGEF28Q8N1W1 1705 aaKnown RBP19.17■□□□□ 0.66
ATG4B-220ENST00000482507 USP19O94966 1318 aa19.16■□□□□ 0.66
ATG4B-220ENST00000482507 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
ATG4B-220ENST00000482507 BCL2L13Q9BXK5 485 aa19.15■□□□□ 0.66
ATG4B-220ENST00000482507 NPHP4O75161 1426 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-220ENST00000482507 NFKBIBQ15653 356 aa19.15■□□□□ 0.66
ATG4B-220ENST00000482507 ANKRD36BQ8N2N9 1353 aa19.15■□□□□ 0.66
ATG4B-220ENST00000482507 WDR63Q8IWG1 891 aa19.14■□□□□ 0.66
ATG4B-220ENST00000482507 EVC2Q86UK5 1308 aa19.14■□□□□ 0.65
ATG4B-220ENST00000482507 SEC24BO95487 1268 aa19.14■□□□□ 0.65
ATG4B-220ENST00000482507 NUTM2FA1L443 756 aa19.13■□□□□ 0.65
ATG4B-220ENST00000482507 CDK19Q9BWU1 502 aa19.13■□□□□ 0.65
ATG4B-220ENST00000482507 PCDHB15Q9Y5E8 787 aa19.13■□□□□ 0.65
ATG4B-220ENST00000482507 LMTK3Q96Q04 1460 aa19.13■□□□□ 0.65
ATG4B-220ENST00000482507 CCDC27Q2M243 656 aa19.12■□□□□ 0.65
ATG4B-220ENST00000482507 CFAP53Q96M91 514 aa19.12■□□□□ 0.65
ATG4B-220ENST00000482507 PUS7Q96PZ0 661 aaKnown RBP19.11■□□□□ 0.65
ATG4B-220ENST00000482507 VIRMAQ69YN4 1812 aaKnown RBP19.11■□□□□ 0.65
ATG4B-220ENST00000482507 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
ATG4B-220ENST00000482507 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
ATG4B-220ENST00000482507 DAXXQ9UER7 740 aaPredicted RBP19.1■□□□□ 0.65
ATG4B-220ENST00000482507 A0A1W2PP64 1363 aa19.09■□□□□ 0.65
ATG4B-220ENST00000482507 NSD2O96028 1365 aa19.09■□□□□ 0.65
ATG4B-220ENST00000482507 ADGRB2O60241 1585 aa19.08■□□□□ 0.65
ATG4B-220ENST00000482507 MAPK8IP3Q9UPT6 1336 aa19.08■□□□□ 0.64
ATG4B-220ENST00000482507 TECPR2O15040 1411 aa19.08■□□□□ 0.64
ATG4B-220ENST00000482507 SIRT1Q96EB6 747 aa19.08■□□□□ 0.64
ATG4B-220ENST00000482507 WASLO00401 505 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-220ENST00000482507 DLC1Q96QB1 1528 aa19.06■□□□□ 0.64
ATG4B-220ENST00000482507 IL27Q8NEV9 243 aa19.05■□□□□ 0.64
ATG4B-220ENST00000482507 TSR2Q969E8 191 aaKnown RBP19.05■□□□□ 0.64
ATG4B-220ENST00000482507 GGNBP2Q9H3C7 697 aa19.05■□□□□ 0.64
ATG4B-220ENST00000482507 FAM135BQ49AJ0 1406 aa19.05■□□□□ 0.64
ATG4B-220ENST00000482507 PLEKHF1Q96S99 279 aa19.04■□□□□ 0.64
ATG4B-220ENST00000482507 CABP1Q9NZU7 370 aa19.04■□□□□ 0.64
ATG4B-220ENST00000482507 COL3A1P02461 1466 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-220ENST00000482507 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
ATG4B-220ENST00000482507 MYH16Q9H6N6 1097 aa19.04■□□□□ 0.64
ATG4B-220ENST00000482507 PDZRN3Q9UPQ7 1066 aa19.03■□□□□ 0.64
ATG4B-220ENST00000482507 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
ATG4B-220ENST00000482507 FRAT2O75474 233 aaPredicted RBP19.02■□□□□ 0.64
ATG4B-220ENST00000482507 PIK3R4Q99570 1358 aa19.02■□□□□ 0.64
ATG4B-220ENST00000482507 TRIM35Q9UPQ4 493 aa19.02■□□□□ 0.63
ATG4B-220ENST00000482507 CD163L1Q9NR16 1453 aa19.02■□□□□ 0.63
ATG4B-220ENST00000482507 DIP2AQ14689 1571 aa19.01■□□□□ 0.63
ATG4B-220ENST00000482507 AAMPQ13685 434 aa19.01■□□□□ 0.63
ATG4B-220ENST00000482507 GSE1Q14687 1217 aa19.01■□□□□ 0.63
ATG4B-220ENST00000482507 CPS1P31327 1500 aa19.01■□□□□ 0.63
ATG4B-220ENST00000482507 U2SURPO15042 1029 aaKnown RBP19.01■□□□□ 0.63
ATG4B-220ENST00000482507 NUDT16Q96DE0 195 aaKnown RBP19.01■□□□□ 0.63
ATG4B-220ENST00000482507 FYB1O15117 783 aa19■□□□□ 0.63
ATG4B-220ENST00000482507 MVPQ14764 893 aaKnown RBP19■□□□□ 0.63
ATG4B-220ENST00000482507 C14orf37Q86TY3 774 aa19■□□□□ 0.63
ATG4B-220ENST00000482507 TMPOP42166 694 aaKnown RBP19■□□□□ 0.63
ATG4B-220ENST00000482507 EXOSC9Q06265 439 aaKnown RBP19■□□□□ 0.63
ATG4B-220ENST00000482507 PROSER2Q86WR7 435 aaPredicted RBP19■□□□□ 0.63
ATG4B-220ENST00000482507 PRR36Q9H6K5 1346 aa18.99■□□□□ 0.63
ATG4B-220ENST00000482507 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-220ENST00000482507 PTCH1Q13635 1447 aa18.98■□□□□ 0.63
ATG4B-220ENST00000482507 ZKSCAN2Q63HK3 967 aa18.98■□□□□ 0.63
ATG4B-220ENST00000482507 DZIP1LQ8IYY4 767 aaKnown RBP18.97■□□□□ 0.63
ATG4B-220ENST00000482507 RWDD1Q9H446 243 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-220ENST00000482507 TRIM27P14373 513 aa18.96■□□□□ 0.63
ATG4B-220ENST00000482507 SSH1Q8WYL5 1049 aa18.96■□□□□ 0.63
ATG4B-220ENST00000482507 ZNF335Q9H4Z2 1342 aaPredicted RBP18.96■□□□□ 0.63
ATG4B-220ENST00000482507 KNDC1Q76NI1 1749 aa18.96■□□□□ 0.63
ATG4B-220ENST00000482507 CCDC61Q9Y6R9 512 aa18.95■□□□□ 0.62
ATG4B-220ENST00000482507 ATAD2Q6PL18 1390 aa18.95■□□□□ 0.62
ATG4B-220ENST00000482507 SMC4Q9NTJ3 1288 aa18.95■□□□□ 0.62
ATG4B-220ENST00000482507 XRN1Q8IZH2 1706 aaKnown RBP18.95■□□□□ 0.62
ATG4B-220ENST00000482507 FTSJ3Q8IY81 847 aaKnown RBP18.94■□□□□ 0.62
ATG4B-220ENST00000482507 STRCQ7RTU9 1775 aa18.94■□□□□ 0.62
ATG4B-220ENST00000482507 CHD2O14647 1828 aaKnown RBP18.94■□□□□ 0.62
ATG4B-220ENST00000482507 ANKRD26Q9UPS8 1709 aa18.93■□□□□ 0.62
ATG4B-220ENST00000482507 CT47B1P0C2W7 299 aaPredicted RBP18.93■□□□□ 0.62
ATG4B-220ENST00000482507 TBC1D32Q96NH3 1257 aa18.93■□□□□ 0.62
ATG4B-220ENST00000482507 TERF2IPQ9NYB0 399 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms