RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
HDAC1-208ENST00000482310 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
HDAC1-208ENST00000482310 ALS2Q96Q42 1657 aa18.29■□□□□ 0.52
HDAC1-208ENST00000482310 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
HDAC1-208ENST00000482310 PIK3C2AO00443 1686 aa18.28■□□□□ 0.52
HDAC1-208ENST00000482310 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
HDAC1-208ENST00000482310 USP6P35125 1406 aa18.28■□□□□ 0.52
HDAC1-208ENST00000482310 ANKRD36BQ8N2N9 1353 aa18.28■□□□□ 0.52
HDAC1-208ENST00000482310 CPSF1Q10570 1443 aaKnown RBP18.27■□□□□ 0.52
HDAC1-208ENST00000482310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.26■□□□□ 0.51
HDAC1-208ENST00000482310 PANK3Q9H999 370 aa18.26■□□□□ 0.51
HDAC1-208ENST00000482310 NSD3Q9BZ95 1437 aa18.25■□□□□ 0.51
HDAC1-208ENST00000482310 NUTM2GQ5VZR2 741 aa18.25■□□□□ 0.51
HDAC1-208ENST00000482310 ABCA3Q99758 1704 aa18.25■□□□□ 0.51
HDAC1-208ENST00000482310 MARF1Q9Y4F3 1742 aaKnown RBP18.25■□□□□ 0.51
HDAC1-208ENST00000482310 TNS3Q68CZ2 1445 aa18.24■□□□□ 0.51
HDAC1-208ENST00000482310 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
HDAC1-208ENST00000482310 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
HDAC1-208ENST00000482310 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
HDAC1-208ENST00000482310 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
HDAC1-208ENST00000482310 DDX10Q13206 875 aaKnown RBP18.23■□□□□ 0.51
HDAC1-208ENST00000482310 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
HDAC1-208ENST00000482310 ZNF692Q9BU19 519 aaPredicted RBP18.22■□□□□ 0.51
HDAC1-208ENST00000482310 PHRF1Q9P1Y6 1649 aaKnown RBP18.22■□□□□ 0.51
HDAC1-208ENST00000482310 CRYBG1Q9Y4K1 1723 aa18.21■□□□□ 0.51
HDAC1-208ENST00000482310 LRP6O75581 1613 aa18.21■□□□□ 0.51
HDAC1-208ENST00000482310 TTC21BQ7Z4L5 1316 aa18.21■□□□□ 0.51
HDAC1-208ENST00000482310 SBNO1A3KN83 1393 aa18.2■□□□□ 0.5
HDAC1-208ENST00000482310 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
HDAC1-208ENST00000482310 SSH2Q76I76 1423 aa18.19■□□□□ 0.5
HDAC1-208ENST00000482310 NME9Q86XW9 330 aa18.19■□□□□ 0.5
HDAC1-208ENST00000482310 ABTB2Q8N961 1025 aa18.19■□□□□ 0.5
HDAC1-208ENST00000482310 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
HDAC1-208ENST00000482310 COL22A1Q8NFW1 1626 aaPredicted RBP18.19■□□□□ 0.5
HDAC1-208ENST00000482310 SPATA31A3Q5VYP0 1347 aa18.19■□□□□ 0.5
HDAC1-208ENST00000482310 LRRC59Q96AG4 307 aaKnown RBP18.18■□□□□ 0.5
HDAC1-208ENST00000482310 JCADQ9P266 1359 aa18.17■□□□□ 0.5
HDAC1-208ENST00000482310 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
HDAC1-208ENST00000482310 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
HDAC1-208ENST00000482310 SOX12O15370 315 aa18.16■□□□□ 0.5
HDAC1-208ENST00000482310 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
HDAC1-208ENST00000482310 LTN1O94822 1766 aa18.16■□□□□ 0.5
HDAC1-208ENST00000482310 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
HDAC1-208ENST00000482310 ARHGEF10O15013 1369 aa18.16■□□□□ 0.5
HDAC1-208ENST00000482310 GGNBP2Q9H3C7 697 aa18.15■□□□□ 0.5
HDAC1-208ENST00000482310 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
HDAC1-208ENST00000482310 NUTM2BA6NNL0 878 aaPredicted RBP18.14■□□□□ 0.49
HDAC1-208ENST00000482310 NUTM2EB1AL46 878 aaPredicted RBP18.14■□□□□ 0.49
HDAC1-208ENST00000482310 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
HDAC1-208ENST00000482310 NLRP6P59044 892 aa18.14■□□□□ 0.49
HDAC1-208ENST00000482310 NUTM2AQ8IVF1 878 aaPredicted RBP18.14■□□□□ 0.49
HDAC1-208ENST00000482310 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
HDAC1-208ENST00000482310 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.49
HDAC1-208ENST00000482310 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.49
HDAC1-208ENST00000482310 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
HDAC1-208ENST00000482310 RGPD5Q99666 1765 aa18.12■□□□□ 0.49
HDAC1-208ENST00000482310 ZBTB7CA1YPR0 619 aa18.11■□□□□ 0.49
HDAC1-208ENST00000482310 FYB1O15117 783 aa18.1■□□□□ 0.49
HDAC1-208ENST00000482310 NLRP13Q86W25 1043 aa18.1■□□□□ 0.49
HDAC1-208ENST00000482310 COG3Q96JB2 828 aa18.1■□□□□ 0.49
HDAC1-208ENST00000482310 SLIT3O75094 1523 aa18.09■□□□□ 0.49
HDAC1-208ENST00000482310 OVOS2A0A0J9YW53 1432 aa18.09■□□□□ 0.49
HDAC1-208ENST00000482310 OVOS2Q6IE36 1432 aa18.09■□□□□ 0.49
HDAC1-208ENST00000482310 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
HDAC1-208ENST00000482310 PER1O15534 1290 aaPredicted RBP18.08■□□□□ 0.48
HDAC1-208ENST00000482310 PLCH1Q4KWH8 1693 aa18.07■□□□□ 0.48
HDAC1-208ENST00000482310 ADAMTS2O95450 1211 aa18.07■□□□□ 0.48
HDAC1-208ENST00000482310 AMER1Q5JTC6 1135 aaPredicted RBP18.07■□□□□ 0.48
HDAC1-208ENST00000482310 USP31Q70CQ4 1352 aa18.06■□□□□ 0.48
HDAC1-208ENST00000482310 USP19O94966 1318 aa18.06■□□□□ 0.48
HDAC1-208ENST00000482310 SPATA31A6Q5VVP1 1343 aa18.06■□□□□ 0.48
HDAC1-208ENST00000482310 FBLN1P23142 703 aa18.06■□□□□ 0.48
HDAC1-208ENST00000482310 NFAT5O94916 1531 aa18.06■□□□□ 0.48
HDAC1-208ENST00000482310 ZC3H6P61129 1189 aaKnown RBP18.05■□□□□ 0.48
HDAC1-208ENST00000482310 NSD2O96028 1365 aa18.04■□□□□ 0.48
HDAC1-208ENST00000482310 MEX3CQ5U5Q3 659 aaKnown RBP18.04■□□□□ 0.48
HDAC1-208ENST00000482310 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
HDAC1-208ENST00000482310 COL14A1Q05707 1796 aaKnown RBP18.02■□□□□ 0.48
HDAC1-208ENST00000482310 GCP02774 474 aa18.02■□□□□ 0.48
HDAC1-208ENST00000482310 UPF1Q92900 1129 aaKnown RBP eCLIP18.02■□□□□ 0.48
HDAC1-208ENST00000482310 PEAK1Q9H792 1746 aa18.02■□□□□ 0.48
HDAC1-208ENST00000482310 KIAA0232Q92628 1395 aa18.02■□□□□ 0.47
HDAC1-208ENST00000482310 RRS1Q15050 365 aaKnown RBP18.01■□□□□ 0.47
HDAC1-208ENST00000482310 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
HDAC1-208ENST00000482310 C8orf37Q96NL8 207 aa18■□□□□ 0.47
HDAC1-208ENST00000482310 RGPD2P0DJD1 1756 aa17.99■□□□□ 0.47
HDAC1-208ENST00000482310 COL18A1P39060 1754 aa17.99■□□□□ 0.47
HDAC1-208ENST00000482310 PPM1GO15355 546 aaPredicted RBP17.99■□□□□ 0.47
HDAC1-208ENST00000482310 KCNH5Q8NCM2 988 aa17.99■□□□□ 0.47
HDAC1-208ENST00000482310 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
HDAC1-208ENST00000482310 PRDM11Q9NQV5 511 aa17.98■□□□□ 0.47
HDAC1-208ENST00000482310 NRAPQ86VF7 1730 aa17.98■□□□□ 0.47
HDAC1-208ENST00000482310 LMO7Q8WWI1 1683 aa17.97■□□□□ 0.47
HDAC1-208ENST00000482310 NPC1L1Q9UHC9 1359 aa17.97■□□□□ 0.47
HDAC1-208ENST00000482310 NWD2Q9ULI1 1742 aa17.97■□□□□ 0.47
HDAC1-208ENST00000482310 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
HDAC1-208ENST00000482310 AFF2P51816 1311 aa17.96■□□□□ 0.46
HDAC1-208ENST00000482310 MAP3K19Q56UN5 1328 aa17.95■□□□□ 0.46
HDAC1-208ENST00000482310 FAM83GA6ND36 823 aa17.94■□□□□ 0.46
HDAC1-208ENST00000482310 AMPHP49418 695 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms