RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 VAC14Q08AM6 782 aa11.23□□□□□ -0.61
SF3B1-210ENST00000482158 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
SF3B1-210ENST00000482158 ADAMTS19Q8TE59 1207 aa11.23□□□□□ -0.61
SF3B1-210ENST00000482158 WASHC4Q2M389 1173 aa11.22□□□□□ -0.61
SF3B1-210ENST00000482158 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
SF3B1-210ENST00000482158 KCNC4Q03721 635 aa11.21□□□□□ -0.61
SF3B1-210ENST00000482158 ARID3AQ99856 593 aa11.2□□□□□ -0.62
SF3B1-210ENST00000482158 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
SF3B1-210ENST00000482158 GLMNQ92990 594 aa11.19□□□□□ -0.62
SF3B1-210ENST00000482158 ZC3H4Q9UPT8 1303 aaKnown RBP11.18□□□□□ -0.62
SF3B1-210ENST00000482158 PPEF1O14829 653 aaPredicted RBP11.18□□□□□ -0.62
SF3B1-210ENST00000482158 OCSTAMPQ9BR26 566 aa11.18□□□□□ -0.62
SF3B1-210ENST00000482158 UNC93B1Q9H1C4 597 aa11.18□□□□□ -0.62
SF3B1-210ENST00000482158 FCF1Q9Y324 198 aaKnown RBP11.18□□□□□ -0.62
SF3B1-210ENST00000482158 FBXO45P0C2W1 286 aa11.17□□□□□ -0.62
SF3B1-210ENST00000482158 PNMA1Q8ND90 353 aa11.17□□□□□ -0.62
SF3B1-210ENST00000482158 ALG2Q9H553 416 aa11.17□□□□□ -0.62
SF3B1-210ENST00000482158 NR1H3Q13133 447 aa11.16□□□□□ -0.62
SF3B1-210ENST00000482158 HDGFL1Q5TGJ6 251 aa11.16□□□□□ -0.62
SF3B1-210ENST00000482158 ARMC2Q8NEN0 867 aa11.15□□□□□ -0.62
SF3B1-210ENST00000482158 CALR3Q96L12 384 aaKnown RBP11.15□□□□□ -0.62
SF3B1-210ENST00000482158 ZBBXA8MT70 800 aa11.14□□□□□ -0.63
SF3B1-210ENST00000482158 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
SF3B1-210ENST00000482158 PDXDC2PQ6P474 469 aa11.14□□□□□ -0.63
SF3B1-210ENST00000482158 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
SF3B1-210ENST00000482158 PLA2G2CQ5R387 149 aa11.13□□□□□ -0.63
SF3B1-210ENST00000482158 SERPINA10Q9UK55 444 aa11.13□□□□□ -0.63
SF3B1-210ENST00000482158 ARXQ96QS3 562 aa11.12□□□□□ -0.63
SF3B1-210ENST00000482158 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
SF3B1-210ENST00000482158 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
SF3B1-210ENST00000482158 BAP1Q92560 729 aa11.11□□□□□ -0.63
SF3B1-210ENST00000482158 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
SF3B1-210ENST00000482158 NBPF14Q5TI25 921 aa11.1□□□□□ -0.63
SF3B1-210ENST00000482158 CCDC97Q96F63 343 aaPredicted RBP11.1□□□□□ -0.63
SF3B1-210ENST00000482158 SOX11P35716 441 aa11.09□□□□□ -0.63
SF3B1-210ENST00000482158 PTK2Q05397 1052 aa11.09□□□□□ -0.63
SF3B1-210ENST00000482158 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
SF3B1-210ENST00000482158 EIF4G2P78344 907 aaKnown RBP eCLIP11.08□□□□□ -0.64
SF3B1-210ENST00000482158 LINC01559Q495D7 138 aa11.08□□□□□ -0.64
SF3B1-210ENST00000482158 SH3RF1Q7Z6J0 888 aa11.08□□□□□ -0.64
SF3B1-210ENST00000482158 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
SF3B1-210ENST00000482158 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
SF3B1-210ENST00000482158 FOXJ1Q92949 421 aa11.07□□□□□ -0.64
SF3B1-210ENST00000482158 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.07□□□□□ -0.64
SF3B1-210ENST00000482158 SEMA3FQ13275 785 aa11.06□□□□□ -0.64
SF3B1-210ENST00000482158 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
SF3B1-210ENST00000482158 ARHGAP9Q9BRR9 750 aa11.06□□□□□ -0.64
SF3B1-210ENST00000482158 GGCXP38435 758 aa11.05□□□□□ -0.64
SF3B1-210ENST00000482158 SH3BP2P78314 561 aa11.05□□□□□ -0.64
SF3B1-210ENST00000482158 IFFO2Q5TF58 517 aa11.05□□□□□ -0.64
SF3B1-210ENST00000482158 ADAM32Q8TC27 787 aa11.05□□□□□ -0.64
SF3B1-210ENST00000482158 EMID1Q96A84 441 aaPredicted RBP11.05□□□□□ -0.64
SF3B1-210ENST00000482158 CFAP70Q5T0N1 1121 aa11.03□□□□□ -0.64
SF3B1-210ENST00000482158 PPP1R12CQ9BZL4 782 aa11.03□□□□□ -0.64
SF3B1-210ENST00000482158 SKOR1P84550 965 aa11.02□□□□□ -0.65
SF3B1-210ENST00000482158 TRIM32Q13049 653 aa11.02□□□□□ -0.65
SF3B1-210ENST00000482158 HOMEZQ8IX15 550 aa11.02□□□□□ -0.65
SF3B1-210ENST00000482158 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
SF3B1-210ENST00000482158 PALM3A6NDB9 673 aaPredicted RBP11□□□□□ -0.65
SF3B1-210ENST00000482158 LIAT1Q6ZQX7 453 aa11□□□□□ -0.65
SF3B1-210ENST00000482158 TBC1D9Q6ZT07 1266 aa11□□□□□ -0.65
SF3B1-210ENST00000482158 ZBTB33Q86T24 672 aa11□□□□□ -0.65
SF3B1-210ENST00000482158 BPHLQ86WA6 291 aaPredicted RBP11□□□□□ -0.65
SF3B1-210ENST00000482158 C1QTNF2Q9BXJ5 285 aa11□□□□□ -0.65
SF3B1-210ENST00000482158 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
SF3B1-210ENST00000482158 TFIP11Q9UBB9 837 aaKnown RBP11□□□□□ -0.65
SF3B1-210ENST00000482158 PCDHB9Q9Y5E1 797 aa11□□□□□ -0.65
SF3B1-210ENST00000482158 MAGEB6P1A0A0J9YX57 407 aa10.99□□□□□ -0.65
SF3B1-210ENST00000482158 ZBTB24O43167 697 aaPredicted RBP10.99□□□□□ -0.65
SF3B1-210ENST00000482158 RPIAP49247 311 aa10.99□□□□□ -0.65
SF3B1-210ENST00000482158 ERFEQ4G0M1 354 aa10.99□□□□□ -0.65
SF3B1-210ENST00000482158 CEP126Q9P2H0 1117 aa10.99□□□□□ -0.65
SF3B1-210ENST00000482158 SRPK2P78362 688 aaKnown RBP10.98□□□□□ -0.65
SF3B1-210ENST00000482158 PHTF2Q8N3S3 785 aa10.98□□□□□ -0.65
SF3B1-210ENST00000482158 FAM174AQ8TBP5 190 aa10.98□□□□□ -0.65
SF3B1-210ENST00000482158 MCCD1P59942 119 aaPredicted RBP10.97□□□□□ -0.65
SF3B1-210ENST00000482158 AGERQ15109 404 aa10.97□□□□□ -0.65
SF3B1-210ENST00000482158 ATP9BO43861 1147 aa10.95□□□□□ -0.66
SF3B1-210ENST00000482158 WNT7BP56706 349 aa10.95□□□□□ -0.66
SF3B1-210ENST00000482158 MAFBQ9Y5Q3 323 aaPredicted RBP10.95□□□□□ -0.66
SF3B1-210ENST00000482158 RFX1P22670 979 aa10.94□□□□□ -0.66
SF3B1-210ENST00000482158 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
SF3B1-210ENST00000482158 DZIP3Q86Y13 1208 aaKnown RBP10.94□□□□□ -0.66
SF3B1-210ENST00000482158 TRMT44Q8IYL2 757 aaKnown RBP10.94□□□□□ -0.66
SF3B1-210ENST00000482158 NFATC2IPQ8NCF5 419 aa10.94□□□□□ -0.66
SF3B1-210ENST00000482158 PLA2G2EQ9NZK7 142 aa10.94□□□□□ -0.66
SF3B1-210ENST00000482158 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
SF3B1-210ENST00000482158 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
SF3B1-210ENST00000482158 GIGYF1O75420 1035 aaPredicted RBP10.92□□□□□ -0.66
SF3B1-210ENST00000482158 TSGA10IPQ3SY00 556 aa10.92□□□□□ -0.66
SF3B1-210ENST00000482158 ZNF592Q92610 1267 aa10.92□□□□□ -0.66
SF3B1-210ENST00000482158 A0A0G2JS52 829 aa10.91□□□□□ -0.66
SF3B1-210ENST00000482158 CD2BP2O95400 341 aaKnown RBP10.91□□□□□ -0.66
SF3B1-210ENST00000482158 VARSP26640 1264 aaKnown RBP10.91□□□□□ -0.66
SF3B1-210ENST00000482158 PBXIP1Q96AQ6 731 aa10.91□□□□□ -0.66
SF3B1-210ENST00000482158 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.66
SF3B1-210ENST00000482158 SKIP12755 728 aa10.9□□□□□ -0.66
SF3B1-210ENST00000482158 SLC19A1P41440 591 aa10.9□□□□□ -0.66
SF3B1-210ENST00000482158 SLFNL1Q499Z3 407 aa10.9□□□□□ -0.66
SF3B1-210ENST00000482158 RC3H1Q5TC82 1133 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms