RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
PRPF4B-206ENST00000481109 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
PRPF4B-206ENST00000481109 SPATA31E1Q6ZUB1 1445 aa12.59□□□□□ -0.39
PRPF4B-206ENST00000481109 C11orf91Q3C1V1 193 aa12.59□□□□□ -0.39
PRPF4B-206ENST00000481109 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
PRPF4B-206ENST00000481109 KLHL33A6NCF5 533 aa12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 NCBP1Q09161 790 aaKnown RBP12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 SNX21Q969T3 373 aa12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 FHOD3Q2V2M9 1422 aa12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 MPNDQ8N594 471 aa12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 DDX49Q9Y6V7 483 aaKnown RBP12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 NESP48681 1621 aa12.58□□□□□ -0.4
PRPF4B-206ENST00000481109 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
PRPF4B-206ENST00000481109 ZSCAN23Q3MJ62 389 aa12.57□□□□□ -0.4
PRPF4B-206ENST00000481109 LRCH2Q5VUJ6 765 aa12.57□□□□□ -0.4
PRPF4B-206ENST00000481109 JMYQ8N9B5 988 aa12.57□□□□□ -0.4
PRPF4B-206ENST00000481109 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.57□□□□□ -0.4
PRPF4B-206ENST00000481109 POLKQ9UBT6 870 aa12.57□□□□□ -0.4
PRPF4B-206ENST00000481109 UHRF1BP1LA0JNW5 1464 aa12.57□□□□□ -0.4
PRPF4B-206ENST00000481109 A0A1B0GUL7 405 aa12.56□□□□□ -0.4
PRPF4B-206ENST00000481109 MYO1CO00159 1063 aa12.56□□□□□ -0.4
PRPF4B-206ENST00000481109 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
PRPF4B-206ENST00000481109 FAM210AQ96ND0 272 aa12.56□□□□□ -0.4
PRPF4B-206ENST00000481109 DEF6Q9H4E7 631 aa12.56□□□□□ -0.4
PRPF4B-206ENST00000481109 TXLNBQ8N3L3 684 aa12.56□□□□□ -0.4
PRPF4B-206ENST00000481109 TRERF1Q96PN7 1200 aa12.56□□□□□ -0.4
PRPF4B-206ENST00000481109 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
PRPF4B-206ENST00000481109 FAM177BA6PVY3 158 aa12.55□□□□□ -0.4
PRPF4B-206ENST00000481109 SUGP1Q8IWZ8 645 aaKnown RBP12.55□□□□□ -0.4
PRPF4B-206ENST00000481109 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.55□□□□□ -0.4
PRPF4B-206ENST00000481109 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
PRPF4B-206ENST00000481109 MIA2Q96PC5 1412 aa12.55□□□□□ -0.4
PRPF4B-206ENST00000481109 BORCS6Q96GS4 357 aa12.55□□□□□ -0.4
PRPF4B-206ENST00000481109 TSGA10IPQ3SY00 556 aa12.54□□□□□ -0.4
PRPF4B-206ENST00000481109 KIF1BPQ96EK5 621 aa12.54□□□□□ -0.4
PRPF4B-206ENST00000481109 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
PRPF4B-206ENST00000481109 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
PRPF4B-206ENST00000481109 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
PRPF4B-206ENST00000481109 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
PRPF4B-206ENST00000481109 MRVI1Q9Y6F6 885 aa12.54□□□□□ -0.4
PRPF4B-206ENST00000481109 PCF11O94913 1555 aaKnown RBP12.53□□□□□ -0.4
PRPF4B-206ENST00000481109 LIG1P18858 919 aa12.53□□□□□ -0.4
PRPF4B-206ENST00000481109 DNAJC21Q5F1R6 531 aaKnown RBP12.53□□□□□ -0.4
PRPF4B-206ENST00000481109 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
PRPF4B-206ENST00000481109 KANK1Q14678 1352 aa12.53□□□□□ -0.4
PRPF4B-206ENST00000481109 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
PRPF4B-206ENST00000481109 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.4
PRPF4B-206ENST00000481109 LRSAM1Q6UWE0 723 aa12.52□□□□□ -0.4
PRPF4B-206ENST00000481109 CWC15Q9P013 229 aaKnown RBP12.52□□□□□ -0.4
PRPF4B-206ENST00000481109 CCDC196A0A1B0GTZ2 297 aa12.52□□□□□ -0.41
PRPF4B-206ENST00000481109 NOM1Q5C9Z4 860 aaKnown RBP12.52□□□□□ -0.41
PRPF4B-206ENST00000481109 TBC1D22AQ8WUA7 517 aa12.52□□□□□ -0.41
PRPF4B-206ENST00000481109 NFATC2IPQ8NCF5 419 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 CALR3Q96L12 384 aaKnown RBP12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 TOMM22Q9NS69 142 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 MYBBP1AQ9BQG0 1328 aaKnown RBP12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 CCDC18Q5T9S5 1454 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 TOPBP1Q92547 1522 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 SRPK2P78362 688 aaKnown RBP12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 SYT10Q6XYQ8 523 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 CEP89Q96ST8 783 aa12.51□□□□□ -0.41
PRPF4B-206ENST00000481109 GYS2P54840 703 aa12.5□□□□□ -0.41
PRPF4B-206ENST00000481109 DRC1Q96MC2 740 aa12.5□□□□□ -0.41
PRPF4B-206ENST00000481109 BLMP54132 1417 aaPredicted RBP12.5□□□□□ -0.41
PRPF4B-206ENST00000481109 SLFNL1Q499Z3 407 aa12.5□□□□□ -0.41
PRPF4B-206ENST00000481109 TTC31Q49AM3 519 aaPredicted RBP12.5□□□□□ -0.41
PRPF4B-206ENST00000481109 C10orf67Q8IYJ2 551 aa12.5□□□□□ -0.41
PRPF4B-206ENST00000481109 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
PRPF4B-206ENST00000481109 RABEP1Q15276 862 aa12.49□□□□□ -0.41
PRPF4B-206ENST00000481109 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
PRPF4B-206ENST00000481109 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
PRPF4B-206ENST00000481109 TACO1Q9BSH4 297 aaKnown RBP12.49□□□□□ -0.41
PRPF4B-206ENST00000481109 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
PRPF4B-206ENST00000481109 KIF15Q9NS87 1388 aa12.49□□□□□ -0.41
PRPF4B-206ENST00000481109 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
PRPF4B-206ENST00000481109 ZC3H12AQ5D1E8 599 aaKnown RBP12.49□□□□□ -0.41
PRPF4B-206ENST00000481109 TDRD9Q8NDG6 1382 aaKnown RBP12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 MTA1Q13330 715 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 MCTP2Q6DN12 878 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 SRLQ86TD4 932 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 DNMBPQ6XZF7 1577 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 ANKRD33BA6NCL7 494 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 SMTNL1A8MU46 457 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 CTAGE5O15320 804 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 TPM3P06753 285 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 BIRC2Q13490 618 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 UVSSAQ2YD98 709 aa12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 CAVIN1Q6NZI2 390 aaKnown RBP12.48□□□□□ -0.41
PRPF4B-206ENST00000481109 PLEKHG2Q9H7P9 1386 aa12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 PLEKHH1Q9ULM0 1364 aa12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 MPHOSPH10O00566 681 aaKnown RBP12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 MAP2K2P36507 400 aa12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 MAP9Q49MG5 647 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms