RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
GTF3C2-210ENST00000480989 BTG4Q9NY30 223 aa13.77□□□□□ -0.21
GTF3C2-210ENST00000480989 KDM2AQ9Y2K7 1162 aa13.77□□□□□ -0.21
GTF3C2-210ENST00000480989 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
GTF3C2-210ENST00000480989 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
GTF3C2-210ENST00000480989 FAM182BQ5T319 152 aa13.76□□□□□ -0.21
GTF3C2-210ENST00000480989 DCAF11Q8TEB1 546 aa13.76□□□□□ -0.21
GTF3C2-210ENST00000480989 CCDC9Q9Y3X0 531 aaKnown RBP13.75□□□□□ -0.21
GTF3C2-210ENST00000480989 SPATA31A5Q5VU36 1347 aa13.74□□□□□ -0.21
GTF3C2-210ENST00000480989 SPATA31A7Q8IWB4 1347 aa13.74□□□□□ -0.21
GTF3C2-210ENST00000480989 NRKQ7Z2Y5 1582 aa13.74□□□□□ -0.21
GTF3C2-210ENST00000480989 GPRASP1Q5JY77 1395 aa13.73□□□□□ -0.21
GTF3C2-210ENST00000480989 LMO7Q8WWI1 1683 aa13.72□□□□□ -0.21
GTF3C2-210ENST00000480989 KIAA1210Q9ULL0 1709 aa13.72□□□□□ -0.21
GTF3C2-210ENST00000480989 EIF3AQ14152 1382 aaKnown RBP13.71□□□□□ -0.21
GTF3C2-210ENST00000480989 KIAA0232Q92628 1395 aa13.71□□□□□ -0.21
GTF3C2-210ENST00000480989 PSDA5PKW4 1024 aaPredicted RBP13.71□□□□□ -0.21
GTF3C2-210ENST00000480989 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.22
GTF3C2-210ENST00000480989 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
GTF3C2-210ENST00000480989 NUDT16Q96DE0 195 aaKnown RBP13.7□□□□□ -0.22
GTF3C2-210ENST00000480989 DISP2A7MBM2 1401 aa13.7□□□□□ -0.22
GTF3C2-210ENST00000480989 CAMTA1Q9Y6Y1 1673 aa13.69□□□□□ -0.22
GTF3C2-210ENST00000480989 SPATA31A1Q5TZJ5 1347 aa13.69□□□□□ -0.22
GTF3C2-210ENST00000480989 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
GTF3C2-210ENST00000480989 NGDNQ8NEJ9 315 aaKnown RBP13.69□□□□□ -0.22
GTF3C2-210ENST00000480989 A0A0G2JS52 829 aa13.68□□□□□ -0.22
GTF3C2-210ENST00000480989 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
GTF3C2-210ENST00000480989 HRCP23327 699 aa13.68□□□□□ -0.22
GTF3C2-210ENST00000480989 MYT1Q01538 1121 aa13.68□□□□□ -0.22
GTF3C2-210ENST00000480989 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
GTF3C2-210ENST00000480989 NUTM2GQ5VZR2 741 aa13.68□□□□□ -0.22
GTF3C2-210ENST00000480989 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
GTF3C2-210ENST00000480989 RREB1Q92766 1687 aa13.68□□□□□ -0.22
GTF3C2-210ENST00000480989 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
GTF3C2-210ENST00000480989 CDK19Q9BWU1 502 aa13.67□□□□□ -0.22
GTF3C2-210ENST00000480989 NUP188Q5SRE5 1749 aa13.67□□□□□ -0.22
GTF3C2-210ENST00000480989 ACEP12821 1306 aa13.66□□□□□ -0.22
GTF3C2-210ENST00000480989 ADRA2BP18089 450 aa13.66□□□□□ -0.22
GTF3C2-210ENST00000480989 BAG6P46379 1132 aa13.66□□□□□ -0.22
GTF3C2-210ENST00000480989 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
GTF3C2-210ENST00000480989 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
GTF3C2-210ENST00000480989 EZH2Q15910 746 aaKnown RBP13.65□□□□□ -0.22
GTF3C2-210ENST00000480989 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
GTF3C2-210ENST00000480989 USP19O94966 1318 aa13.64□□□□□ -0.23
GTF3C2-210ENST00000480989 PLEKHG3A1L390 1219 aa13.64□□□□□ -0.23
GTF3C2-210ENST00000480989 NBPF8Q3BBV2 869 aa13.64□□□□□ -0.23
GTF3C2-210ENST00000480989 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
GTF3C2-210ENST00000480989 STRN4Q9NRL3 753 aa13.64□□□□□ -0.23
GTF3C2-210ENST00000480989 CAMKK2Q96RR4 588 aa13.63□□□□□ -0.23
GTF3C2-210ENST00000480989 PEAK1Q9H792 1746 aa13.63□□□□□ -0.23
GTF3C2-210ENST00000480989 PARP4Q9UKK3 1724 aaKnown RBP13.63□□□□□ -0.23
GTF3C2-210ENST00000480989 COL18A1P39060 1754 aa13.63□□□□□ -0.23
GTF3C2-210ENST00000480989 CPDO75976 1380 aa13.62□□□□□ -0.23
GTF3C2-210ENST00000480989 TRIM37O94972 964 aa13.62□□□□□ -0.23
GTF3C2-210ENST00000480989 R3HDM1Q15032 1099 aaKnown RBP13.62□□□□□ -0.23
GTF3C2-210ENST00000480989 LARP1Q6PKG0 1096 aaKnown RBP13.62□□□□□ -0.23
GTF3C2-210ENST00000480989 PIK3C2AO00443 1686 aa13.62□□□□□ -0.23
GTF3C2-210ENST00000480989 COL5A2P05997 1499 aaPredicted RBP13.61□□□□□ -0.23
GTF3C2-210ENST00000480989 SLIT3O75094 1523 aa13.61□□□□□ -0.23
GTF3C2-210ENST00000480989 USP35Q9P2H5 1018 aa13.61□□□□□ -0.23
GTF3C2-210ENST00000480989 CCDC61Q9Y6R9 512 aa13.61□□□□□ -0.23
GTF3C2-210ENST00000480989 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
GTF3C2-210ENST00000480989 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
GTF3C2-210ENST00000480989 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
GTF3C2-210ENST00000480989 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
GTF3C2-210ENST00000480989 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
GTF3C2-210ENST00000480989 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
GTF3C2-210ENST00000480989 TRPM1Q7Z4N2 1603 aa13.58□□□□□ -0.24
GTF3C2-210ENST00000480989 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
GTF3C2-210ENST00000480989 RGPD5Q99666 1765 aa13.58□□□□□ -0.24
GTF3C2-210ENST00000480989 USP6P35125 1406 aa13.57□□□□□ -0.24
GTF3C2-210ENST00000480989 FAM196AQ6ZSG2 479 aa13.57□□□□□ -0.24
GTF3C2-210ENST00000480989 AKAP12Q02952 1782 aa13.57□□□□□ -0.24
GTF3C2-210ENST00000480989 GCP02774 474 aa13.56□□□□□ -0.24
GTF3C2-210ENST00000480989 CENPJQ9HC77 1338 aaPredicted RBP13.56□□□□□ -0.24
GTF3C2-210ENST00000480989 APBA3O96018 575 aa13.55□□□□□ -0.24
GTF3C2-210ENST00000480989 TCP11L2Q8N4U5 519 aa13.55□□□□□ -0.24
GTF3C2-210ENST00000480989 RGPD3A6NKT7 1758 aaPredicted RBP13.54□□□□□ -0.24
GTF3C2-210ENST00000480989 RGPD4Q7Z3J3 1758 aa13.54□□□□□ -0.24
GTF3C2-210ENST00000480989 SRPK2P78362 688 aaKnown RBP13.54□□□□□ -0.24
GTF3C2-210ENST00000480989 PTF1AQ7RTS3 328 aa13.54□□□□□ -0.24
GTF3C2-210ENST00000480989 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
GTF3C2-210ENST00000480989 CRB1P82279 1406 aa13.54□□□□□ -0.24
GTF3C2-210ENST00000480989 EVA1CP58658 441 aa13.53□□□□□ -0.24
GTF3C2-210ENST00000480989 CABP1Q9NZU7 370 aa13.53□□□□□ -0.24
GTF3C2-210ENST00000480989 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
GTF3C2-210ENST00000480989 NLRP13Q86W25 1043 aa13.52□□□□□ -0.25
GTF3C2-210ENST00000480989 L3MBTL2Q969R5 705 aa13.52□□□□□ -0.25
GTF3C2-210ENST00000480989 AXIN2Q9Y2T1 843 aa13.52□□□□□ -0.25
GTF3C2-210ENST00000480989 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.25
GTF3C2-210ENST00000480989 NFAT5O94916 1531 aa13.52□□□□□ -0.25
GTF3C2-210ENST00000480989 PDE3BQ13370 1112 aa13.51□□□□□ -0.25
GTF3C2-210ENST00000480989 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
GTF3C2-210ENST00000480989 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
GTF3C2-210ENST00000480989 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
GTF3C2-210ENST00000480989 THRAP3Q9Y2W1 955 aaKnown RBP13.5□□□□□ -0.25
GTF3C2-210ENST00000480989 OVOS2A0A0G2JMS6 1433 aa13.49□□□□□ -0.25
GTF3C2-210ENST00000480989 OVOS2A0A0J9YW53 1432 aa13.49□□□□□ -0.25
GTF3C2-210ENST00000480989 OVOS2Q6IE36 1432 aa13.49□□□□□ -0.25
GTF3C2-210ENST00000480989 NLRP6P59044 892 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms