RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 CAMSAP1Q5T5Y3 1602 aa11.26□□□□□ -0.61
USP33-208ENST00000477949 ZPR1O75312 459 aa11.24□□□□□ -0.61
USP33-208ENST00000477949 HSPA1LP34931 641 aa11.24□□□□□ -0.61
USP33-208ENST00000477949 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
USP33-208ENST00000477949 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
USP33-208ENST00000477949 AGLP35573 1532 aa11.24□□□□□ -0.61
USP33-208ENST00000477949 ABCA6Q8N139 1617 aa11.24□□□□□ -0.61
USP33-208ENST00000477949 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
USP33-208ENST00000477949 TCOF1Q13428 1488 aaKnown RBP11.23□□□□□ -0.61
USP33-208ENST00000477949 ALKQ9UM73 1620 aa11.23□□□□□ -0.61
USP33-208ENST00000477949 PLEKHD1A6NEE1 506 aa11.22□□□□□ -0.61
USP33-208ENST00000477949 ZNF142P52746 1687 aaPredicted RBP11.22□□□□□ -0.61
USP33-208ENST00000477949 ZNF518AQ6AHZ1 1483 aa11.22□□□□□ -0.61
USP33-208ENST00000477949 TMEM134Q9H6X4 195 aa11.22□□□□□ -0.61
USP33-208ENST00000477949 PLA2R1Q13018 1463 aa11.21□□□□□ -0.61
USP33-208ENST00000477949 TRAF7Q6Q0C0 670 aa11.21□□□□□ -0.61
USP33-208ENST00000477949 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
USP33-208ENST00000477949 NPATQ14207 1427 aa11.2□□□□□ -0.62
USP33-208ENST00000477949 RCCD1A6NED2 376 aa11.2□□□□□ -0.62
USP33-208ENST00000477949 FCHSD2O94868 740 aa11.2□□□□□ -0.62
USP33-208ENST00000477949 MYO5CQ9NQX4 1742 aa11.19□□□□□ -0.62
USP33-208ENST00000477949 NRG2O14511 850 aaPredicted RBP11.19□□□□□ -0.62
USP33-208ENST00000477949 SEMA3EO15041 775 aa11.19□□□□□ -0.62
USP33-208ENST00000477949 MROH2AA6NES4 1674 aa11.19□□□□□ -0.62
USP33-208ENST00000477949 FAM9AQ8IZU1 332 aaPredicted RBP11.18□□□□□ -0.62
USP33-208ENST00000477949 MLH3Q9UHC1 1453 aa11.18□□□□□ -0.62
USP33-208ENST00000477949 MYO3AQ8NEV4 1616 aa11.17□□□□□ -0.62
USP33-208ENST00000477949 FAM161AQ3B820 660 aa11.17□□□□□ -0.62
USP33-208ENST00000477949 KMT5BQ4FZB7 885 aa11.17□□□□□ -0.62
USP33-208ENST00000477949 BLOC1S3Q6QNY0 202 aa11.17□□□□□ -0.62
USP33-208ENST00000477949 CNTLNQ9NXG0 1405 aa11.17□□□□□ -0.62
USP33-208ENST00000477949 ACTN4O43707 911 aaKnown RBP11.16□□□□□ -0.62
USP33-208ENST00000477949 AFAP1Q8N556 730 aa11.16□□□□□ -0.62
USP33-208ENST00000477949 OATP04181 439 aa11.15□□□□□ -0.62
USP33-208ENST00000477949 KIF14Q15058 1648 aa11.15□□□□□ -0.62
USP33-208ENST00000477949 CEP170BQ9Y4F5 1589 aaPredicted RBP11.15□□□□□ -0.62
USP33-208ENST00000477949 KIDINS220Q9ULH0 1771 aa11.14□□□□□ -0.63
USP33-208ENST00000477949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
USP33-208ENST00000477949 LCE2BO14633 110 aa11.14□□□□□ -0.63
USP33-208ENST00000477949 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
USP33-208ENST00000477949 NEURL4Q96JN8 1562 aa11.13□□□□□ -0.63
USP33-208ENST00000477949 EFCAB2Q5VUJ9 269 aa11.13□□□□□ -0.63
USP33-208ENST00000477949 RGS17Q9UGC6 210 aaPredicted RBP11.13□□□□□ -0.63
USP33-208ENST00000477949 CPS1P31327 1500 aa11.13□□□□□ -0.63
USP33-208ENST00000477949 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
USP33-208ENST00000477949 CFHP08603 1231 aa11.11□□□□□ -0.63
USP33-208ENST00000477949 SLC10A3P09131 477 aa11.11□□□□□ -0.63
USP33-208ENST00000477949 PIP4K2BP78356 416 aa11.11□□□□□ -0.63
USP33-208ENST00000477949 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
USP33-208ENST00000477949 SUPT6HQ7KZ85 1726 aaKnown RBP11.11□□□□□ -0.63
USP33-208ENST00000477949 ZMYM3Q14202 1370 aa11.11□□□□□ -0.63
USP33-208ENST00000477949 PTPRKQ15262 1439 aa11.1□□□□□ -0.63
USP33-208ENST00000477949 ABCC1P33527 1531 aa11.1□□□□□ -0.63
USP33-208ENST00000477949 CDC42BPBQ9Y5S2 1711 aa11.1□□□□□ -0.63
USP33-208ENST00000477949 SLC19A1P41440 591 aa11.1□□□□□ -0.63
USP33-208ENST00000477949 HIC1Q14526 733 aa11.1□□□□□ -0.63
USP33-208ENST00000477949 SMYD5Q6GMV2 418 aa11.1□□□□□ -0.63
USP33-208ENST00000477949 VWDEQ8N2E2 1590 aa11.1□□□□□ -0.63
USP33-208ENST00000477949 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
USP33-208ENST00000477949 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
USP33-208ENST00000477949 SHANK2Q9UPX8 1470 aa11.09□□□□□ -0.63
USP33-208ENST00000477949 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
USP33-208ENST00000477949 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
USP33-208ENST00000477949 TOM1O60784 492 aa11.08□□□□□ -0.64
USP33-208ENST00000477949 NR1I2O75469 434 aa11.08□□□□□ -0.64
USP33-208ENST00000477949 DNMT1P26358 1616 aaKnown RBP11.08□□□□□ -0.64
USP33-208ENST00000477949 CLTCQ00610 1675 aaKnown RBP11.08□□□□□ -0.64
USP33-208ENST00000477949 POLR1AO95602 1720 aaPredicted RBP11.07□□□□□ -0.64
USP33-208ENST00000477949 ANKLE1Q8NAG6 615 aa11.07□□□□□ -0.64
USP33-208ENST00000477949 PLXNC1O60486 1568 aa11.07□□□□□ -0.64
USP33-208ENST00000477949 PREX2Q70Z35 1606 aa11.06□□□□□ -0.64
USP33-208ENST00000477949 TLL1O43897 1013 aa11.06□□□□□ -0.64
USP33-208ENST00000477949 RBM26Q5T8P6 1007 aaKnown RBP11.06□□□□□ -0.64
USP33-208ENST00000477949 A2ML1A8K2U0 1454 aa11.06□□□□□ -0.64
USP33-208ENST00000477949 TROQ12816 1431 aaPredicted RBP11.05□□□□□ -0.64
USP33-208ENST00000477949 METTL3Q86U44 580 aaKnown RBP11.05□□□□□ -0.64
USP33-208ENST00000477949 ESF1Q9H501 851 aaKnown RBP11.05□□□□□ -0.64
USP33-208ENST00000477949 SAMD9LQ8IVG5 1584 aa11.04□□□□□ -0.64
USP33-208ENST00000477949 S1PR4O95977 384 aa11.04□□□□□ -0.64
USP33-208ENST00000477949 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
USP33-208ENST00000477949 SPRYD7Q5W111 196 aa11.04□□□□□ -0.64
USP33-208ENST00000477949 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
USP33-208ENST00000477949 EMID1Q96A84 441 aaPredicted RBP11.04□□□□□ -0.64
USP33-208ENST00000477949 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
USP33-208ENST00000477949 PPEF1O14829 653 aaPredicted RBP11.03□□□□□ -0.64
USP33-208ENST00000477949 GNPATO15228 680 aa11.03□□□□□ -0.64
USP33-208ENST00000477949 ADH1BP00325 375 aa11.03□□□□□ -0.64
USP33-208ENST00000477949 ZNF598Q86UK7 904 aaKnown RBP11.03□□□□□ -0.64
USP33-208ENST00000477949 LRRIQ1Q96JM4 1722 aa11.03□□□□□ -0.64
USP33-208ENST00000477949 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
USP33-208ENST00000477949 POTEAQ6S8J7 498 aa11.01□□□□□ -0.65
USP33-208ENST00000477949 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
USP33-208ENST00000477949 SLC6A16Q9GZN6 736 aa11.01□□□□□ -0.65
USP33-208ENST00000477949 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
USP33-208ENST00000477949 RNF17Q9BXT8 1623 aaKnown RBP11.01□□□□□ -0.65
USP33-208ENST00000477949 LIAT1Q6ZQX7 453 aa11□□□□□ -0.65
USP33-208ENST00000477949 MED14O60244 1454 aa11□□□□□ -0.65
USP33-208ENST00000477949 LRRC7Q96NW7 1537 aa10.99□□□□□ -0.65
USP33-208ENST00000477949 INO80Q9ULG1 1556 aaPredicted RBP10.99□□□□□ -0.65
USP33-208ENST00000477949 FECHP22830 423 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms