RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 CCER2I3L3R5 266 aa10.75□□□□□ -0.69
RBM39-230ENST00000476806 TMEM92Q6UXU6 159 aa10.75□□□□□ -0.69
RBM39-230ENST00000476806 IQGAP1P46940 1657 aa10.75□□□□□ -0.69
RBM39-230ENST00000476806 WASHC2AQ641Q2 1341 aa10.74□□□□□ -0.69
RBM39-230ENST00000476806 TMEM131LA2VDJ0 1609 aa10.73□□□□□ -0.69
RBM39-230ENST00000476806 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
RBM39-230ENST00000476806 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
RBM39-230ENST00000476806 ZMYM3Q14202 1370 aa10.73□□□□□ -0.69
RBM39-230ENST00000476806 NEXMIFQ5QGS0 1516 aa10.73□□□□□ -0.69
RBM39-230ENST00000476806 MYO3AQ8NEV4 1616 aa10.73□□□□□ -0.69
RBM39-230ENST00000476806 DDX10Q13206 875 aaKnown RBP10.72□□□□□ -0.69
RBM39-230ENST00000476806 TNRQ92752 1358 aa10.72□□□□□ -0.69
RBM39-230ENST00000476806 FER1L4A9Z1Z3 1794 aa10.72□□□□□ -0.69
RBM39-230ENST00000476806 PUS7Q96PZ0 661 aaKnown RBP10.71□□□□□ -0.69
RBM39-230ENST00000476806 KIF7Q2M1P5 1343 aa10.7□□□□□ -0.7
RBM39-230ENST00000476806 UBAP1LF5GYI3 381 aa10.7□□□□□ -0.7
RBM39-230ENST00000476806 NINLQ9Y2I6 1382 aa10.69□□□□□ -0.7
RBM39-230ENST00000476806 ST20-MTHFSA0A0A6YYL1 179 aa10.69□□□□□ -0.7
RBM39-230ENST00000476806 IDI1Q13907 227 aa10.69□□□□□ -0.7
RBM39-230ENST00000476806 MICALL2Q8IY33 904 aa10.69□□□□□ -0.7
RBM39-230ENST00000476806 EFCAB3Q8N7B9 438 aa10.69□□□□□ -0.7
RBM39-230ENST00000476806 C14orf93Q9H972 538 aaKnown RBP10.69□□□□□ -0.7
RBM39-230ENST00000476806 IQSEC2Q5JU85 1478 aa10.68□□□□□ -0.7
RBM39-230ENST00000476806 CFAP65Q6ZU64 1925 aaKnown RBP10.68□□□□□ -0.7
RBM39-230ENST00000476806 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
RBM39-230ENST00000476806 A2ML1A8K2U0 1454 aa10.67□□□□□ -0.7
RBM39-230ENST00000476806 HSPA1LP34931 641 aa10.66□□□□□ -0.7
RBM39-230ENST00000476806 ZNF335Q9H4Z2 1342 aaPredicted RBP10.65□□□□□ -0.7
RBM39-230ENST00000476806 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
RBM39-230ENST00000476806 DLC1Q96QB1 1528 aa10.65□□□□□ -0.7
RBM39-230ENST00000476806 EID1Q9Y6B2 187 aa10.65□□□□□ -0.7
RBM39-230ENST00000476806 RIMS2Q9UQ26 1411 aa10.65□□□□□ -0.7
RBM39-230ENST00000476806 ADGRB1O14514 1584 aa10.65□□□□□ -0.71
RBM39-230ENST00000476806 DIP2AQ14689 1571 aa10.65□□□□□ -0.71
RBM39-230ENST00000476806 ADGRF5Q8IZF2 1346 aa10.64□□□□□ -0.71
RBM39-230ENST00000476806 RALBP1Q15311 655 aa10.64□□□□□ -0.71
RBM39-230ENST00000476806 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
RBM39-230ENST00000476806 MED1Q15648 1581 aaPredicted RBP10.64□□□□□ -0.71
RBM39-230ENST00000476806 C3P01024 1663 aa10.63□□□□□ -0.71
RBM39-230ENST00000476806 NBPF1Q3BBV0 1214 aa10.63□□□□□ -0.71
RBM39-230ENST00000476806 ARSIQ5FYB1 569 aa10.63□□□□□ -0.71
RBM39-230ENST00000476806 THEMISQ8N1K5 641 aaPredicted RBP10.63□□□□□ -0.71
RBM39-230ENST00000476806 EVC2Q86UK5 1308 aa10.62□□□□□ -0.71
RBM39-230ENST00000476806 UBR1Q8IWV7 1749 aa10.62□□□□□ -0.71
RBM39-230ENST00000476806 LSM11P83369 360 aaKnown RBP eCLIP10.62□□□□□ -0.714e-15■■□□□ 11.4
RBM39-230ENST00000476806 TESK2Q96S53 571 aa10.62□□□□□ -0.71
RBM39-230ENST00000476806 HIRIP3Q9BW71 556 aaPredicted RBP10.62□□□□□ -0.71
RBM39-230ENST00000476806 SLIT1O75093 1534 aa10.62□□□□□ -0.71
RBM39-230ENST00000476806 NPC1L1Q9UHC9 1359 aa10.62□□□□□ -0.71
RBM39-230ENST00000476806 TMEM2Q9UHN6 1383 aa10.62□□□□□ -0.71
RBM39-230ENST00000476806 NCKAP5LQ9HCH0 1330 aa10.61□□□□□ -0.71
RBM39-230ENST00000476806 MYO5BQ9ULV0 1848 aa10.61□□□□□ -0.71
RBM39-230ENST00000476806 QRICH2Q9H0J4 1663 aa10.61□□□□□ -0.71
RBM39-230ENST00000476806 CFAP70Q5T0N1 1121 aa10.61□□□□□ -0.71
RBM39-230ENST00000476806 ATAD2Q6PL18 1390 aa10.61□□□□□ -0.71
RBM39-230ENST00000476806 ALKQ9UM73 1620 aa10.61□□□□□ -0.71
RBM39-230ENST00000476806 SETD1BQ9UPS6 1966 aaKnown RBP10.61□□□□□ -0.71
RBM39-230ENST00000476806 SIRT1Q96EB6 747 aa10.6□□□□□ -0.71
RBM39-230ENST00000476806 PRKRIP1Q9H875 184 aaPredicted RBP10.6□□□□□ -0.71
RBM39-230ENST00000476806 KNDC1Q76NI1 1749 aa10.6□□□□□ -0.71
RBM39-230ENST00000476806 ARHGEF28Q8N1W1 1705 aaKnown RBP10.6□□□□□ -0.71
RBM39-230ENST00000476806 PLEKHG1Q9ULL1 1385 aa10.6□□□□□ -0.71
RBM39-230ENST00000476806 ZNF142P52746 1687 aaPredicted RBP10.6□□□□□ -0.71
RBM39-230ENST00000476806 FBXO31Q5XUX0 539 aaPredicted RBP10.59□□□□□ -0.71
RBM39-230ENST00000476806 POLR3GLQ9BT43 218 aa10.59□□□□□ -0.71
RBM39-230ENST00000476806 ABCC11Q96J66 1382 aa10.59□□□□□ -0.71
RBM39-230ENST00000476806 PIK3R4Q99570 1358 aa10.59□□□□□ -0.71
RBM39-230ENST00000476806 FAM135BQ49AJ0 1406 aa10.58□□□□□ -0.72
RBM39-230ENST00000476806 YTHDC2Q9H6S0 1430 aaKnown RBP10.58□□□□□ -0.72
RBM39-230ENST00000476806 ARHGAP23Q9P227 1491 aa10.58□□□□□ -0.72
RBM39-230ENST00000476806 LRPPRCP42704 1394 aaKnown RBP10.58□□□□□ -0.72
RBM39-230ENST00000476806 PIP4K2BP78356 416 aa10.58□□□□□ -0.72
RBM39-230ENST00000476806 KHSRPQ92945 711 aaKnown RBP eCLIP10.58□□□□□ -0.723e-14■■■□□ 14.6
RBM39-230ENST00000476806 KNSTRNQ9Y448 316 aa10.58□□□□□ -0.72
RBM39-230ENST00000476806 TECPR2O15040 1411 aa10.58□□□□□ -0.72
RBM39-230ENST00000476806 CEP170BQ9Y4F5 1589 aaPredicted RBP10.57□□□□□ -0.72
RBM39-230ENST00000476806 BRD4O60885 1362 aaPredicted RBP10.57□□□□□ -0.72
RBM39-230ENST00000476806 NSD2O96028 1365 aa10.57□□□□□ -0.72
RBM39-230ENST00000476806 MS4A4AQ96JQ5 239 aa10.57□□□□□ -0.72
RBM39-230ENST00000476806 PLA2G2EQ9NZK7 142 aa10.57□□□□□ -0.72
RBM39-230ENST00000476806 RGS17Q9UGC6 210 aaPredicted RBP10.57□□□□□ -0.72
RBM39-230ENST00000476806 MYBBP1AQ9BQG0 1328 aaKnown RBP10.57□□□□□ -0.72
RBM39-230ENST00000476806 INSRP06213 1382 aa10.56□□□□□ -0.72
RBM39-230ENST00000476806 CPS1P31327 1500 aa10.56□□□□□ -0.72
RBM39-230ENST00000476806 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
RBM39-230ENST00000476806 POGKQ9P215 609 aa10.55□□□□□ -0.72
RBM39-230ENST00000476806 USP32Q8NFA0 1604 aa10.55□□□□□ -0.72
RBM39-230ENST00000476806 ASXL1Q8IXJ9 1541 aa10.54□□□□□ -0.72
RBM39-230ENST00000476806 C11orf95C9JLR9 678 aaPredicted RBP10.54□□□□□ -0.72
RBM39-230ENST00000476806 SETD1AO15047 1707 aaKnown RBP10.54□□□□□ -0.72
RBM39-230ENST00000476806 TRAK1Q9UPV9 953 aa10.54□□□□□ -0.72
RBM39-230ENST00000476806 SOX12O15370 315 aa10.53□□□□□ -0.72
RBM39-230ENST00000476806 PARD3Q8TEW0 1356 aa10.52□□□□□ -0.72
RBM39-230ENST00000476806 PTCH1Q13635 1447 aa10.52□□□□□ -0.73
RBM39-230ENST00000476806 BCANQ96GW7 911 aa10.52□□□□□ -0.73
RBM39-230ENST00000476806 MRS2Q9HD23 443 aa10.52□□□□□ -0.73
RBM39-230ENST00000476806 TERF2IPQ9NYB0 399 aa10.52□□□□□ -0.73
RBM39-230ENST00000476806 TBX22Q9Y458 520 aa10.52□□□□□ -0.73
RBM39-230ENST00000476806 MYOM1P52179 1685 aa10.52□□□□□ -0.73
RBM39-230ENST00000476806 ANKRD36BQ8N2N9 1353 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms