RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 DDRGK1Q96HY6 314 aa27.69■■■□□ 2.02
SH3D21-202ENST00000474766 EXOC6Q8TAG9 804 aa27.68■■■□□ 2.02
SH3D21-202ENST00000474766 SIRT1Q96EB6 747 aa27.68■■■□□ 2.02
SH3D21-202ENST00000474766 DCCP43146 1447 aa27.68■■■□□ 2.02
SH3D21-202ENST00000474766 PRAM1Q96QH2 718 aa27.67■■■□□ 2.02
SH3D21-202ENST00000474766 NPM2Q86SE8 214 aaKnown RBP27.65■■■□□ 2.02
SH3D21-202ENST00000474766 ATF3P18847 181 aa27.64■■■□□ 2.02
SH3D21-202ENST00000474766 SAFB2Q14151 953 aaKnown RBP eCLIP27.64■■■□□ 2.02
SH3D21-202ENST00000474766 CDC42BPGQ6DT37 1551 aa27.64■■■□□ 2.01
SH3D21-202ENST00000474766 CADPS2Q86UW7 1296 aa27.63■■■□□ 2.01
SH3D21-202ENST00000474766 WDR43Q15061 677 aaKnown RBP eCLIP27.63■■■□□ 2.01
SH3D21-202ENST00000474766 ROBO1Q9Y6N7 1651 aa27.62■■■□□ 2.01
SH3D21-202ENST00000474766 SLAIN2Q9P270 581 aa27.62■■■□□ 2.01
SH3D21-202ENST00000474766 MST1RQ04912 1400 aa27.61■■■□□ 2.01
SH3D21-202ENST00000474766 POGKQ9P215 609 aa27.61■■■□□ 2.01
SH3D21-202ENST00000474766 LAS1LQ9Y4W2 734 aaKnown RBP27.61■■■□□ 2.01
SH3D21-202ENST00000474766 CENPJQ9HC77 1338 aaPredicted RBP27.6■■■□□ 2.01
SH3D21-202ENST00000474766 CARD14Q9BXL6 1004 aa27.6■■■□□ 2.01
SH3D21-202ENST00000474766 ZNF521Q96K83 1311 aa27.58■■■□□ 2.01
SH3D21-202ENST00000474766 ADGRB2O60241 1585 aa27.57■■■□□ 2
SH3D21-202ENST00000474766 FMN2Q9NZ56 1722 aa27.56■■■□□ 2
SH3D21-202ENST00000474766 QRICH2Q9H0J4 1663 aa27.54■■■□□ 2
SH3D21-202ENST00000474766 MINK1Q8N4C8 1332 aaPredicted RBP27.54■■■□□ 2
SH3D21-202ENST00000474766 C1orf167Q5SNV9 1468 aa27.53■■■□□ 2
SH3D21-202ENST00000474766 GSE1Q14687 1217 aa27.51■■□□□ 1.99
SH3D21-202ENST00000474766 DUSP27Q5VZP5 1158 aa27.5■■□□□ 1.99
SH3D21-202ENST00000474766 RGPD8O14715 1765 aaPredicted RBP27.49■■□□□ 1.99
SH3D21-202ENST00000474766 BRINP3Q76B58 766 aa27.49■■□□□ 1.99
SH3D21-202ENST00000474766 NUTM2FA1L443 756 aa27.48■■□□□ 1.99
SH3D21-202ENST00000474766 HSPA1LP34931 641 aa27.48■■□□□ 1.99
SH3D21-202ENST00000474766 USP32Q8NFA0 1604 aa27.47■■□□□ 1.99
SH3D21-202ENST00000474766 GOLGA2Q08379 1002 aa27.46■■□□□ 1.99
SH3D21-202ENST00000474766 PUS7Q96PZ0 661 aaKnown RBP27.45■■□□□ 1.98
SH3D21-202ENST00000474766 ORAI2Q96SN7 254 aa27.45■■□□□ 1.98
SH3D21-202ENST00000474766 RTN4Q9NQC3 1192 aaKnown RBP27.45■■□□□ 1.98
SH3D21-202ENST00000474766 POLR3AO14802 1390 aaPredicted RBP27.44■■□□□ 1.98
SH3D21-202ENST00000474766 PLIN1O60240 522 aa27.44■■□□□ 1.98
SH3D21-202ENST00000474766 TRMT2AQ8IZ69 625 aaKnown RBP27.43■■□□□ 1.98
SH3D21-202ENST00000474766 PHLPP1O60346 1717 aa27.43■■□□□ 1.98
SH3D21-202ENST00000474766 NHSL1Q5SYE7 1610 aa27.43■■□□□ 1.98
SH3D21-202ENST00000474766 WASLO00401 505 aaPredicted RBP27.42■■□□□ 1.98
SH3D21-202ENST00000474766 SLFN5Q08AF3 891 aa27.42■■□□□ 1.98
SH3D21-202ENST00000474766 NSD3Q9BZ95 1437 aa27.42■■□□□ 1.98
SH3D21-202ENST00000474766 AHDC1Q5TGY3 1603 aaPredicted RBP27.42■■□□□ 1.98
SH3D21-202ENST00000474766 TULP4Q9NRJ4 1543 aa27.42■■□□□ 1.98
SH3D21-202ENST00000474766 NGEFQ8N5V2 710 aa27.41■■□□□ 1.98
SH3D21-202ENST00000474766 DAXXQ9UER7 740 aaPredicted RBP27.41■■□□□ 1.98
SH3D21-202ENST00000474766 NFKBIBQ15653 356 aa27.4■■□□□ 1.98
SH3D21-202ENST00000474766 SLC12A5Q9H2X9 1139 aa27.4■■□□□ 1.98
SH3D21-202ENST00000474766 CCDC146Q8IYE0 955 aa27.39■■□□□ 1.98
SH3D21-202ENST00000474766 COL16A1Q07092 1604 aaPredicted RBP27.39■■□□□ 1.97
SH3D21-202ENST00000474766 PRR36Q9H6K5 1346 aa27.39■■□□□ 1.97
SH3D21-202ENST00000474766 ESCO1Q5FWF5 840 aa27.38■■□□□ 1.97
SH3D21-202ENST00000474766 CRBNQ96SW2 442 aa27.38■■□□□ 1.97
SH3D21-202ENST00000474766 ANKARQ7Z5J8 1434 aa27.38■■□□□ 1.97
SH3D21-202ENST00000474766 DDX17Q92841 729 aaKnown RBP27.38■■□□□ 1.97
SH3D21-202ENST00000474766 APAF1O14727 1248 aa27.37■■□□□ 1.97
SH3D21-202ENST00000474766 CDK19Q9BWU1 502 aa27.37■■□□□ 1.97
SH3D21-202ENST00000474766 ATP7BP35670 1465 aa27.36■■□□□ 1.97
SH3D21-202ENST00000474766 KDM2BQ8NHM5 1336 aa27.36■■□□□ 1.97
SH3D21-202ENST00000474766 EVC2Q86UK5 1308 aa27.35■■□□□ 1.97
SH3D21-202ENST00000474766 KIF1AQ12756 1690 aa27.35■■□□□ 1.97
SH3D21-202ENST00000474766 UBE2Q2Q8WVN8 375 aa27.34■■□□□ 1.97
SH3D21-202ENST00000474766 MORC1Q86VD1 984 aa27.33■■□□□ 1.97
SH3D21-202ENST00000474766 CENPQQ7L2Z9 268 aaPredicted RBP27.33■■□□□ 1.96
SH3D21-202ENST00000474766 CABP2Q9NPB3 220 aa27.33■■□□□ 1.96
SH3D21-202ENST00000474766 TOPAZ1Q8N9V7 1692 aa27.32■■□□□ 1.96
SH3D21-202ENST00000474766 ITSN1Q15811 1721 aa27.32■■□□□ 1.96
SH3D21-202ENST00000474766 C20orf194Q5TEA3 1177 aa27.32■■□□□ 1.96
SH3D21-202ENST00000474766 SHPRHQ149N8 1683 aa27.32■■□□□ 1.96
SH3D21-202ENST00000474766 BRPF3Q9ULD4 1205 aa27.31■■□□□ 1.96
SH3D21-202ENST00000474766 SRPK2P78362 688 aaKnown RBP27.3■■□□□ 1.96
SH3D21-202ENST00000474766 SPINK5Q9NQ38 1064 aaPredicted RBP27.3■■□□□ 1.96
SH3D21-202ENST00000474766 E9PSI1 815 aa27.29■■□□□ 1.96
SH3D21-202ENST00000474766 CGNL1Q0VF96 1302 aa27.29■■□□□ 1.96
SH3D21-202ENST00000474766 NUDT16Q96DE0 195 aaKnown RBP27.29■■□□□ 1.96
SH3D21-202ENST00000474766 ANKRD36BQ8N2N9 1353 aa27.29■■□□□ 1.96
SH3D21-202ENST00000474766 PHF8Q9UPP1 1060 aa27.29■■□□□ 1.96
SH3D21-202ENST00000474766 FOXO3O43524 673 aa27.28■■□□□ 1.96
SH3D21-202ENST00000474766 FAM161AQ3B820 660 aa27.28■■□□□ 1.96
SH3D21-202ENST00000474766 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.28■■□□□ 1.96
SH3D21-202ENST00000474766 FRAT1Q92837 279 aaPredicted RBP27.27■■□□□ 1.96
SH3D21-202ENST00000474766 PXDNQ92626 1479 aa27.27■■□□□ 1.96
SH3D21-202ENST00000474766 NSD2O96028 1365 aa27.27■■□□□ 1.96
SH3D21-202ENST00000474766 PMFBP1Q8TBY8 1022 aa27.26■■□□□ 1.95
SH3D21-202ENST00000474766 SOS2Q07890 1332 aaPredicted RBP27.25■■□□□ 1.95
SH3D21-202ENST00000474766 NPHP3Q7Z494 1330 aa27.25■■□□□ 1.95
SH3D21-202ENST00000474766 EIF5BO60841 1220 aaKnown RBP27.24■■□□□ 1.95
SH3D21-202ENST00000474766 XPCQ01831 940 aaPredicted RBP27.24■■□□□ 1.95
SH3D21-202ENST00000474766 NINLQ9Y2I6 1382 aa27.22■■□□□ 1.95
SH3D21-202ENST00000474766 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.22■■□□□ 1.95
SH3D21-202ENST00000474766 WWC1Q8IX03 1113 aa27.21■■□□□ 1.95
SH3D21-202ENST00000474766 CCDC61Q9Y6R9 512 aa27.21■■□□□ 1.95
SH3D21-202ENST00000474766 C8orf34Q49A92 452 aa27.2■■□□□ 1.94
SH3D21-202ENST00000474766 ATAD2Q6PL18 1390 aa27.2■■□□□ 1.94
SH3D21-202ENST00000474766 TNNT2P45379 298 aaPredicted RBP27.19■■□□□ 1.94
SH3D21-202ENST00000474766 RUNDC1Q96C34 613 aa27.19■■□□□ 1.94
SH3D21-202ENST00000474766 PPIP5K1Q6PFW1 1433 aa27.19■■□□□ 1.94
SH3D21-202ENST00000474766 JCADQ9P266 1359 aa27.19■■□□□ 1.94
SH3D21-202ENST00000474766 MTHFSP49914 203 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms