RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 SLIT2O94813 1529 aa29.09■■■□□ 2.25
SNX13-206ENST00000474067 NBPF8Q3BBV2 869 aa29.08■■■□□ 2.25
SNX13-206ENST00000474067 ABCA3Q99758 1704 aa29.08■■■□□ 2.25
SNX13-206ENST00000474067 RALGAPBQ86X10 1494 aa29.07■■■□□ 2.24
SNX13-206ENST00000474067 CABLES1Q8TDN4 633 aa29.07■■■□□ 2.24
SNX13-206ENST00000474067 NWD2Q9ULI1 1742 aa29.07■■■□□ 2.24
SNX13-206ENST00000474067 RGS12O14924 1447 aa29.06■■■□□ 2.24
SNX13-206ENST00000474067 SLC24A1O60721 1099 aa29.06■■■□□ 2.24
SNX13-206ENST00000474067 GJD4Q96KN9 370 aaPredicted RBP29.06■■■□□ 2.24
SNX13-206ENST00000474067 SBNO2Q9Y2G9 1366 aa29.05■■■□□ 2.24
SNX13-206ENST00000474067 CABP2Q9NPB3 220 aa29.05■■■□□ 2.24
SNX13-206ENST00000474067 CLSPNQ9HAW4 1339 aa29.04■■■□□ 2.24
SNX13-206ENST00000474067 PLEKHG5O94827 1062 aa29.04■■■□□ 2.24
SNX13-206ENST00000474067 ATAD2Q6PL18 1390 aa29.02■■■□□ 2.24
SNX13-206ENST00000474067 PLCH1Q4KWH8 1693 aa29■■■□□ 2.23
SNX13-206ENST00000474067 TIMELESSQ9UNS1 1208 aa29■■■□□ 2.23
SNX13-206ENST00000474067 COL14A1Q05707 1796 aaKnown RBP29■■■□□ 2.23
SNX13-206ENST00000474067 VPS72Q15906 364 aa28.99■■■□□ 2.23
SNX13-206ENST00000474067 ABTB2Q8N961 1025 aa28.99■■■□□ 2.23
SNX13-206ENST00000474067 ZNF692Q9BU19 519 aaPredicted RBP28.99■■■□□ 2.23
SNX13-206ENST00000474067 NLRP13Q86W25 1043 aa28.98■■■□□ 2.23
SNX13-206ENST00000474067 PRDM11Q9NQV5 511 aa28.97■■■□□ 2.23
SNX13-206ENST00000474067 CABP1Q9NZU7 370 aa28.97■■■□□ 2.23
SNX13-206ENST00000474067 CCDC9Q9Y3X0 531 aaKnown RBP28.97■■■□□ 2.23
SNX13-206ENST00000474067 FAM83GA6ND36 823 aa28.95■■■□□ 2.22
SNX13-206ENST00000474067 UPF1Q92900 1129 aaKnown RBP eCLIP28.95■■■□□ 2.22
SNX13-206ENST00000474067 CRYBG1Q9Y4K1 1723 aa28.94■■■□□ 2.22
SNX13-206ENST00000474067 USP6P35125 1406 aa28.94■■■□□ 2.22
SNX13-206ENST00000474067 BTG4Q9NY30 223 aa28.92■■■□□ 2.22
SNX13-206ENST00000474067 PHRF1Q9P1Y6 1649 aaKnown RBP28.91■■■□□ 2.22
SNX13-206ENST00000474067 PUS7Q96PZ0 661 aaKnown RBP28.9■■■□□ 2.22
SNX13-206ENST00000474067 PCGF6Q9BYE7 350 aa28.87■■■□□ 2.21
SNX13-206ENST00000474067 USP19O94966 1318 aa28.87■■■□□ 2.21
SNX13-206ENST00000474067 GLI3P10071 1580 aa28.87■■■□□ 2.21
SNX13-206ENST00000474067 KIAA0232Q92628 1395 aa28.87■■■□□ 2.21
SNX13-206ENST00000474067 NUTM2GQ5VZR2 741 aa28.86■■■□□ 2.21
SNX13-206ENST00000474067 CCDC125Q86Z20 511 aa28.86■■■□□ 2.21
SNX13-206ENST00000474067 TTC21AQ8NDW8 1320 aa28.86■■■□□ 2.21
SNX13-206ENST00000474067 CPDO75976 1380 aa28.86■■■□□ 2.21
SNX13-206ENST00000474067 NRAPQ86VF7 1730 aa28.85■■■□□ 2.21
SNX13-206ENST00000474067 NLRP6P59044 892 aa28.84■■■□□ 2.21
SNX13-206ENST00000474067 ONECUT3O60422 494 aaPredicted RBP28.82■■■□□ 2.2
SNX13-206ENST00000474067 ZC3H6P61129 1189 aaKnown RBP28.82■■■□□ 2.2
SNX13-206ENST00000474067 NINLQ9Y2I6 1382 aa28.82■■■□□ 2.2
SNX13-206ENST00000474067 NRKQ7Z2Y5 1582 aa28.82■■■□□ 2.2
SNX13-206ENST00000474067 KTN1Q86UP2 1357 aaKnown RBP28.81■■■□□ 2.2
SNX13-206ENST00000474067 A0A0G2JS52 829 aa28.81■■■□□ 2.2
SNX13-206ENST00000474067 GCP02774 474 aa28.81■■■□□ 2.2
SNX13-206ENST00000474067 MYT1Q01538 1121 aa28.81■■■□□ 2.2
SNX13-206ENST00000474067 HDGFL2Q7Z4V5 671 aaPredicted RBP28.81■■■□□ 2.2
SNX13-206ENST00000474067 AKAP12Q02952 1782 aa28.8■■■□□ 2.2
SNX13-206ENST00000474067 EVA1CP58658 441 aa28.8■■■□□ 2.2
SNX13-206ENST00000474067 SEPT12Q8IYM1 358 aa28.8■■■□□ 2.2
SNX13-206ENST00000474067 KCNH5Q8NCM2 988 aa28.8■■■□□ 2.2
SNX13-206ENST00000474067 CPSF1Q10570 1443 aaKnown RBP28.79■■■□□ 2.2
SNX13-206ENST00000474067 TERF2IPQ9NYB0 399 aa28.79■■■□□ 2.2
SNX13-206ENST00000474067 SSH2Q76I76 1423 aa28.78■■■□□ 2.2
SNX13-206ENST00000474067 TMC1Q8TDI8 760 aa28.78■■■□□ 2.2
SNX13-206ENST00000474067 SPATA31A5Q5VU36 1347 aa28.77■■■□□ 2.2
SNX13-206ENST00000474067 TTC21BQ7Z4L5 1316 aa28.77■■■□□ 2.2
SNX13-206ENST00000474067 SPATA31A7Q8IWB4 1347 aa28.77■■■□□ 2.2
SNX13-206ENST00000474067 CHRNA2Q15822 529 aa28.76■■■□□ 2.19
SNX13-206ENST00000474067 ST20-MTHFSA0A0A6YYL1 179 aa28.75■■■□□ 2.19
SNX13-206ENST00000474067 CDCA8Q53HL2 280 aa28.75■■■□□ 2.19
SNX13-206ENST00000474067 STRN4Q9NRL3 753 aa28.75■■■□□ 2.19
SNX13-206ENST00000474067 SLIT3O75094 1523 aa28.74■■■□□ 2.19
SNX13-206ENST00000474067 KRT27Q7Z3Y8 459 aa28.74■■■□□ 2.19
SNX13-206ENST00000474067 TMF1P82094 1093 aa28.73■■■□□ 2.19
SNX13-206ENST00000474067 MON2Q7Z3U7 1717 aa28.72■■■□□ 2.19
SNX13-206ENST00000474067 SF3B2Q13435 895 aaKnown RBP28.72■■■□□ 2.19
SNX13-206ENST00000474067 FAM98CQ17RN3 349 aaKnown RBP28.72■■■□□ 2.19
SNX13-206ENST00000474067 CCER1Q8TC90 406 aaPredicted RBP28.72■■■□□ 2.19
SNX13-206ENST00000474067 PIK3C2AO00443 1686 aa28.72■■■□□ 2.19
SNX13-206ENST00000474067 USP47Q96K76 1375 aa28.72■■■□□ 2.19
SNX13-206ENST00000474067 SPATA31A1Q5TZJ5 1347 aa28.7■■■□□ 2.19
SNX13-206ENST00000474067 AATKQ6ZMQ8 1374 aa28.7■■■□□ 2.18
SNX13-206ENST00000474067 TESK2Q96S53 571 aa28.69■■■□□ 2.18
SNX13-206ENST00000474067 THRAP3Q9Y2W1 955 aaKnown RBP28.69■■■□□ 2.18
SNX13-206ENST00000474067 EDC4Q6P2E9 1401 aaKnown RBP28.69■■■□□ 2.18
SNX13-206ENST00000474067 BLMP54132 1417 aaPredicted RBP28.68■■■□□ 2.18
SNX13-206ENST00000474067 LMO7Q8WWI1 1683 aa28.67■■■□□ 2.18
SNX13-206ENST00000474067 BRWD3Q6RI45 1802 aa28.66■■■□□ 2.18
SNX13-206ENST00000474067 CAMTA1Q9Y6Y1 1673 aa28.65■■■□□ 2.18
SNX13-206ENST00000474067 BARGINQ6ZT62 677 aa28.65■■■□□ 2.18
SNX13-206ENST00000474067 SLC12A5Q9H2X9 1139 aa28.65■■■□□ 2.18
SNX13-206ENST00000474067 USP31Q70CQ4 1352 aa28.64■■■□□ 2.18
SNX13-206ENST00000474067 ZBTB7CA1YPR0 619 aa28.64■■■□□ 2.18
SNX13-206ENST00000474067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.63■■■□□ 2.17
SNX13-206ENST00000474067 TCP11L2Q8N4U5 519 aa28.63■■■□□ 2.17
SNX13-206ENST00000474067 COL5A2P05997 1499 aaPredicted RBP28.62■■■□□ 2.17
SNX13-206ENST00000474067 CD163L1Q9NR16 1453 aa28.62■■■□□ 2.17
SNX13-206ENST00000474067 ABCC6O95255 1503 aa28.62■■■□□ 2.17
SNX13-206ENST00000474067 CRB1P82279 1406 aa28.61■■■□□ 2.17
SNX13-206ENST00000474067 THSD7AQ9UPZ6 1657 aa28.61■■■□□ 2.17
SNX13-206ENST00000474067 A0A1W2PP64 1363 aa28.61■■■□□ 2.17
SNX13-206ENST00000474067 USP35Q9P2H5 1018 aa28.6■■■□□ 2.17
SNX13-206ENST00000474067 USP54Q70EL1 1684 aa28.6■■■□□ 2.17
SNX13-206ENST00000474067 C11orf95C9JLR9 678 aaPredicted RBP28.59■■■□□ 2.17
SNX13-206ENST00000474067 LARP1Q6PKG0 1096 aaKnown RBP28.59■■■□□ 2.17
SNX13-206ENST00000474067 ARHGEF25Q86VW2 580 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms