RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PDZRN3Q9UPQ7 1066 aa14.04□□□□□ -0.16
C9orf3-214ENST00000473778 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
C9orf3-214ENST00000473778 FYB1O15117 783 aa14.03□□□□□ -0.16
C9orf3-214ENST00000473778 SRPK2P78362 688 aaKnown RBP14.03□□□□□ -0.16
C9orf3-214ENST00000473778 GSE1Q14687 1217 aa14.03□□□□□ -0.16
C9orf3-214ENST00000473778 MINK1Q8N4C8 1332 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-214ENST00000473778 NEO1Q92859 1461 aa14.02□□□□□ -0.16
C9orf3-214ENST00000473778 RIMBP3CA6NJZ7 1639 aa14.02□□□□□ -0.16
C9orf3-214ENST00000473778 RIMBP3BA6NNM3 1639 aa14.02□□□□□ -0.16
C9orf3-214ENST00000473778 RIMBP3Q9UFD9 1639 aa14.02□□□□□ -0.16
C9orf3-214ENST00000473778 PREX1Q8TCU6 1659 aa14.02□□□□□ -0.16
C9orf3-214ENST00000473778 U2SURPO15042 1029 aaKnown RBP14.02□□□□□ -0.17
C9orf3-214ENST00000473778 MVPQ14764 893 aaKnown RBP14.02□□□□□ -0.17
C9orf3-214ENST00000473778 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
C9orf3-214ENST00000473778 ZFYVE9O95405 1425 aa14.02□□□□□ -0.17
C9orf3-214ENST00000473778 ANKRD26Q9UPS8 1709 aa14.01□□□□□ -0.17
C9orf3-214ENST00000473778 TMPOP42166 694 aaKnown RBP14.01□□□□□ -0.17
C9orf3-214ENST00000473778 EXOSC9Q06265 439 aaKnown RBP14.01□□□□□ -0.17
C9orf3-214ENST00000473778 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
C9orf3-214ENST00000473778 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
C9orf3-214ENST00000473778 TRIM27P14373 513 aa14□□□□□ -0.17
C9orf3-214ENST00000473778 FBLN1P23142 703 aa14□□□□□ -0.17
C9orf3-214ENST00000473778 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
C9orf3-214ENST00000473778 CLTCQ00610 1675 aaKnown RBP14□□□□□ -0.17
C9orf3-214ENST00000473778 FBXO31Q5XUX0 539 aaPredicted RBP14□□□□□ -0.17
C9orf3-214ENST00000473778 SSH1Q8WYL5 1049 aa14□□□□□ -0.17
C9orf3-214ENST00000473778 YTHDC2Q9H6S0 1430 aaKnown RBP13.99□□□□□ -0.17
C9orf3-214ENST00000473778 ZKSCAN2Q63HK3 967 aa13.98□□□□□ -0.17
C9orf3-214ENST00000473778 DZIP1LQ8IYY4 767 aaKnown RBP13.98□□□□□ -0.17
C9orf3-214ENST00000473778 BRPF3Q9ULD4 1205 aa13.98□□□□□ -0.17
C9orf3-214ENST00000473778 SLC52A1Q9NWF4 448 aa13.98□□□□□ -0.17
C9orf3-214ENST00000473778 AAMPQ13685 434 aa13.97□□□□□ -0.17
C9orf3-214ENST00000473778 SMC4Q9NTJ3 1288 aa13.97□□□□□ -0.17
C9orf3-214ENST00000473778 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
C9orf3-214ENST00000473778 ARHGEF40Q8TER5 1519 aa13.96□□□□□ -0.17
C9orf3-214ENST00000473778 TBC1D32Q96NH3 1257 aa13.96□□□□□ -0.17
C9orf3-214ENST00000473778 ALKQ9UM73 1620 aa13.96□□□□□ -0.17
C9orf3-214ENST00000473778 SLKQ9H2G2 1235 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-214ENST00000473778 RWDD1Q9H446 243 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-214ENST00000473778 MED14O60244 1454 aa13.95□□□□□ -0.18
C9orf3-214ENST00000473778 ATAD2Q6PL18 1390 aa13.95□□□□□ -0.18
C9orf3-214ENST00000473778 PNPLA6Q8IY17 1366 aa13.95□□□□□ -0.18
C9orf3-214ENST00000473778 CABP1Q9NZU7 370 aa13.95□□□□□ -0.18
C9orf3-214ENST00000473778 KIF20BQ96Q89 1820 aa13.95□□□□□ -0.18
C9orf3-214ENST00000473778 RIPK4P57078 832 aa13.95□□□□□ -0.18
C9orf3-214ENST00000473778 ANTXR1Q9H6X2 564 aa13.95□□□□□ -0.18
C9orf3-214ENST00000473778 NOB1Q9ULX3 412 aaKnown RBP13.95□□□□□ -0.18
C9orf3-214ENST00000473778 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
C9orf3-214ENST00000473778 ZMYM3Q14202 1370 aa13.94□□□□□ -0.18
C9orf3-214ENST00000473778 CDK19Q9BWU1 502 aa13.94□□□□□ -0.18
C9orf3-214ENST00000473778 POGKQ9P215 609 aa13.94□□□□□ -0.18
C9orf3-214ENST00000473778 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
C9orf3-214ENST00000473778 ATF7IPQ6VMQ6 1270 aa13.94□□□□□ -0.18
C9orf3-214ENST00000473778 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
C9orf3-214ENST00000473778 TERF2IPQ9NYB0 399 aa13.94□□□□□ -0.18
C9orf3-214ENST00000473778 ITPRIPQ8IWB1 547 aa13.93□□□□□ -0.18
C9orf3-214ENST00000473778 TBC1D2Q9BYX2 928 aa13.93□□□□□ -0.18
C9orf3-214ENST00000473778 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-214ENST00000473778 DIAPH1O60610 1272 aaKnown RBP13.92□□□□□ -0.18
C9orf3-214ENST00000473778 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
C9orf3-214ENST00000473778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.91□□□□□ -0.18
C9orf3-214ENST00000473778 MAP2P11137 1827 aaKnown RBP13.91□□□□□ -0.18
C9orf3-214ENST00000473778 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-214ENST00000473778 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-214ENST00000473778 ZBTB40Q9NUA8 1239 aa13.9□□□□□ -0.18
C9orf3-214ENST00000473778 CDC42BPGQ6DT37 1551 aa13.9□□□□□ -0.18
C9orf3-214ENST00000473778 IL16Q14005 1332 aa13.9□□□□□ -0.18
C9orf3-214ENST00000473778 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
C9orf3-214ENST00000473778 PHACTR3Q96KR7 559 aa13.9□□□□□ -0.18
C9orf3-214ENST00000473778 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
C9orf3-214ENST00000473778 RSPH6AQ9H0K4 717 aa13.9□□□□□ -0.18
C9orf3-214ENST00000473778 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
C9orf3-214ENST00000473778 DDX19BQ9UMR2 479 aa13.89□□□□□ -0.19
C9orf3-214ENST00000473778 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
C9orf3-214ENST00000473778 EIF5BO60841 1220 aaKnown RBP13.89□□□□□ -0.19
C9orf3-214ENST00000473778 PRKAR2BP31323 418 aa13.89□□□□□ -0.19
C9orf3-214ENST00000473778 SMC5Q8IY18 1101 aa13.89□□□□□ -0.19
C9orf3-214ENST00000473778 BECN1Q14457 450 aa13.88□□□□□ -0.19
C9orf3-214ENST00000473778 HMOX1P09601 288 aa13.88□□□□□ -0.19
C9orf3-214ENST00000473778 HDGFL2Q7Z4V5 671 aaPredicted RBP13.88□□□□□ -0.19
C9orf3-214ENST00000473778 SPRYD3Q8NCJ5 442 aa13.88□□□□□ -0.19
C9orf3-214ENST00000473778 PKNOX2Q96KN3 472 aa13.88□□□□□ -0.19
C9orf3-214ENST00000473778 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
C9orf3-214ENST00000473778 MFAP1P55081 439 aaKnown RBP13.87□□□□□ -0.19
C9orf3-214ENST00000473778 TSPYL6Q8N831 410 aa13.87□□□□□ -0.19
C9orf3-214ENST00000473778 UPF2Q9HAU5 1272 aaKnown RBP13.87□□□□□ -0.19
C9orf3-214ENST00000473778 EMILIN1Q9Y6C2 1016 aa13.87□□□□□ -0.19
C9orf3-214ENST00000473778 FCHSD2O94868 740 aa13.86□□□□□ -0.19
C9orf3-214ENST00000473778 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
C9orf3-214ENST00000473778 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
C9orf3-214ENST00000473778 C22orf23Q9BZE7 217 aa13.85□□□□□ -0.19
C9orf3-214ENST00000473778 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
C9orf3-214ENST00000473778 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
C9orf3-214ENST00000473778 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
C9orf3-214ENST00000473778 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
C9orf3-214ENST00000473778 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
C9orf3-214ENST00000473778 NME9Q86XW9 330 aa13.83□□□□□ -0.19
C9orf3-214ENST00000473778 ATP7BP35670 1465 aa13.83□□□□□ -0.19
C9orf3-214ENST00000473778 NUCB1Q02818 461 aa13.83□□□□□ -0.2
C9orf3-214ENST00000473778 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms