RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SPATA31A3Q5VYP0 1347 aa23.75■■□□□ 1.39
HSPG2-208ENST00000471322 PLEKHG3A1L390 1219 aa23.74■■□□□ 1.39
HSPG2-208ENST00000471322 PER1O15534 1290 aaPredicted RBP23.74■■□□□ 1.39
HSPG2-208ENST00000471322 LRP6O75581 1613 aa23.73■■□□□ 1.39
HSPG2-208ENST00000471322 SPATA31A6Q5VVP1 1343 aa23.73■■□□□ 1.39
HSPG2-208ENST00000471322 TMC1Q8TDI8 760 aa23.73■■□□□ 1.39
HSPG2-208ENST00000471322 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
HSPG2-208ENST00000471322 PUS7Q96PZ0 661 aaKnown RBP23.71■■□□□ 1.39
HSPG2-208ENST00000471322 POLR3AO14802 1390 aaPredicted RBP23.71■■□□□ 1.39
HSPG2-208ENST00000471322 ATAD2Q6PL18 1390 aa23.7■■□□□ 1.39
HSPG2-208ENST00000471322 ADAMTS2O95450 1211 aa23.7■■□□□ 1.39
HSPG2-208ENST00000471322 MEX3CQ5U5Q3 659 aaKnown RBP23.7■■□□□ 1.39
HSPG2-208ENST00000471322 CABLES1Q8TDN4 633 aa23.7■■□□□ 1.39
HSPG2-208ENST00000471322 TNS3Q68CZ2 1445 aa23.7■■□□□ 1.38
HSPG2-208ENST00000471322 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
HSPG2-208ENST00000471322 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
HSPG2-208ENST00000471322 SBNO1A3KN83 1393 aa23.68■■□□□ 1.38
HSPG2-208ENST00000471322 NUTM2GQ5VZR2 741 aa23.68■■□□□ 1.38
HSPG2-208ENST00000471322 TRPM3Q9HCF6 1732 aaPredicted RBP23.67■■□□□ 1.38
HSPG2-208ENST00000471322 KNSTRNQ9Y448 316 aa23.66■■□□□ 1.38
HSPG2-208ENST00000471322 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
HSPG2-208ENST00000471322 PARD3Q8TEW0 1356 aa23.65■■□□□ 1.38
HSPG2-208ENST00000471322 CCDC184Q52MB2 194 aa23.64■■□□□ 1.38
HSPG2-208ENST00000471322 HAP1P54257 671 aaPredicted RBP23.63■■□□□ 1.37
HSPG2-208ENST00000471322 C8orf37Q96NL8 207 aa23.63■■□□□ 1.37
HSPG2-208ENST00000471322 ARHGEF10O15013 1369 aa23.62■■□□□ 1.37
HSPG2-208ENST00000471322 COL22A1Q8NFW1 1626 aaPredicted RBP23.62■■□□□ 1.37
HSPG2-208ENST00000471322 CNGB1Q14028 1251 aaPredicted RBP23.62■■□□□ 1.37
HSPG2-208ENST00000471322 BRD4O60885 1362 aaPredicted RBP23.62■■□□□ 1.37
HSPG2-208ENST00000471322 USP6P35125 1406 aa23.62■■□□□ 1.37
HSPG2-208ENST00000471322 ABTB2Q8N961 1025 aa23.61■■□□□ 1.37
HSPG2-208ENST00000471322 RGS17Q9UGC6 210 aaPredicted RBP23.6■■□□□ 1.37
HSPG2-208ENST00000471322 ALS2Q96Q42 1657 aa23.6■■□□□ 1.37
HSPG2-208ENST00000471322 NPC1L1Q9UHC9 1359 aa23.59■■□□□ 1.37
HSPG2-208ENST00000471322 NLRP13Q86W25 1043 aa23.59■■□□□ 1.37
HSPG2-208ENST00000471322 CD163L1Q9NR16 1453 aa23.58■■□□□ 1.37
HSPG2-208ENST00000471322 CPSF1Q10570 1443 aaKnown RBP23.58■■□□□ 1.37
HSPG2-208ENST00000471322 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.58■■□□□ 1.36
HSPG2-208ENST00000471322 ZNF692Q9BU19 519 aaPredicted RBP23.58■■□□□ 1.36
HSPG2-208ENST00000471322 NGLY1Q96IV0 654 aa23.57■■□□□ 1.36
HSPG2-208ENST00000471322 HDGFL2Q7Z4V5 671 aaPredicted RBP23.56■■□□□ 1.36
HSPG2-208ENST00000471322 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
HSPG2-208ENST00000471322 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
HSPG2-208ENST00000471322 AMER1Q5JTC6 1135 aaPredicted RBP23.55■■□□□ 1.36
HSPG2-208ENST00000471322 CC2D1BQ5T0F9 858 aaKnown RBP23.55■■□□□ 1.36
HSPG2-208ENST00000471322 TERF2IPQ9NYB0 399 aa23.55■■□□□ 1.36
HSPG2-208ENST00000471322 AFF2P51816 1311 aa23.55■■□□□ 1.36
HSPG2-208ENST00000471322 TTC21BQ7Z4L5 1316 aa23.55■■□□□ 1.36
HSPG2-208ENST00000471322 HNRNPUQ00839 825 aaKnown RBP eCLIP23.55■■□□□ 1.36
HSPG2-208ENST00000471322 AKAP12Q02952 1782 aa23.54■■□□□ 1.36
HSPG2-208ENST00000471322 SSH2Q76I76 1423 aa23.54■■□□□ 1.36
HSPG2-208ENST00000471322 MYOM1P52179 1685 aa23.53■■□□□ 1.36
HSPG2-208ENST00000471322 NLRP6P59044 892 aa23.53■■□□□ 1.36
HSPG2-208ENST00000471322 PNISRQ8TF01 805 aaKnown RBP23.52■■□□□ 1.36
HSPG2-208ENST00000471322 NINLQ9Y2I6 1382 aa23.52■■□□□ 1.36
HSPG2-208ENST00000471322 ZRANB1Q9UGI0 708 aa23.51■■□□□ 1.35
HSPG2-208ENST00000471322 POTEAQ6S8J7 498 aa23.51■■□□□ 1.35
HSPG2-208ENST00000471322 ABCA3Q99758 1704 aa23.5■■□□□ 1.35
HSPG2-208ENST00000471322 ILDR2Q71H61 639 aa23.5■■□□□ 1.35
HSPG2-208ENST00000471322 GTF3C3Q9Y5Q9 886 aa23.5■■□□□ 1.35
HSPG2-208ENST00000471322 MON2Q7Z3U7 1717 aa23.49■■□□□ 1.35
HSPG2-208ENST00000471322 SOX12O15370 315 aa23.49■■□□□ 1.35
HSPG2-208ENST00000471322 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
HSPG2-208ENST00000471322 NME9Q86XW9 330 aa23.49■■□□□ 1.35
HSPG2-208ENST00000471322 PIK3C2AO00443 1686 aa23.48■■□□□ 1.35
HSPG2-208ENST00000471322 FAM83GA6ND36 823 aa23.48■■□□□ 1.35
HSPG2-208ENST00000471322 NRKQ7Z2Y5 1582 aa23.48■■□□□ 1.35
HSPG2-208ENST00000471322 ANKRD36BQ8N2N9 1353 aa23.47■■□□□ 1.35
HSPG2-208ENST00000471322 CARD14Q9BXL6 1004 aa23.47■■□□□ 1.35
HSPG2-208ENST00000471322 EDC4Q6P2E9 1401 aaKnown RBP23.46■■□□□ 1.35
HSPG2-208ENST00000471322 CHRNA2Q15822 529 aa23.46■■□□□ 1.35
HSPG2-208ENST00000471322 ZNF772Q68DY9 489 aaPredicted RBP23.46■■□□□ 1.35
HSPG2-208ENST00000471322 USP21Q9UK80 565 aa23.46■■□□□ 1.35
HSPG2-208ENST00000471322 CRYBG1Q9Y4K1 1723 aa23.46■■□□□ 1.35
HSPG2-208ENST00000471322 TTC21AQ8NDW8 1320 aa23.46■■□□□ 1.35
HSPG2-208ENST00000471322 GCP02774 474 aa23.45■■□□□ 1.34
HSPG2-208ENST00000471322 MARF1Q9Y4F3 1742 aaKnown RBP23.45■■□□□ 1.34
HSPG2-208ENST00000471322 ZBTB7CA1YPR0 619 aa23.44■■□□□ 1.34
HSPG2-208ENST00000471322 FNBP4Q8N3X1 1017 aaPredicted RBP23.44■■□□□ 1.34
HSPG2-208ENST00000471322 USP19O94966 1318 aa23.44■■□□□ 1.34
HSPG2-208ENST00000471322 KIAA0232Q92628 1395 aa23.44■■□□□ 1.34
HSPG2-208ENST00000471322 PHRF1Q9P1Y6 1649 aaKnown RBP23.44■■□□□ 1.34
HSPG2-208ENST00000471322 PRDM11Q9NQV5 511 aa23.44■■□□□ 1.34
HSPG2-208ENST00000471322 QTRT2Q9H974 415 aaKnown RBP23.42■■□□□ 1.34
HSPG2-208ENST00000471322 PPP2R1AP30153 589 aa23.41■■□□□ 1.34
HSPG2-208ENST00000471322 ZBED9Q6R2W3 1325 aa23.41■■□□□ 1.34
HSPG2-208ENST00000471322 BCL9LQ86UU0 1499 aa23.4■■□□□ 1.34
HSPG2-208ENST00000471322 INSRP06213 1382 aa23.4■■□□□ 1.34
HSPG2-208ENST00000471322 BTG4Q9NY30 223 aa23.4■■□□□ 1.34
HSPG2-208ENST00000471322 NSD3Q9BZ95 1437 aa23.39■■□□□ 1.34
HSPG2-208ENST00000471322 CGNL1Q0VF96 1302 aa23.39■■□□□ 1.33
HSPG2-208ENST00000471322 SLIT2O94813 1529 aa23.38■■□□□ 1.33
HSPG2-208ENST00000471322 GGNBP2Q9H3C7 697 aa23.37■■□□□ 1.33
HSPG2-208ENST00000471322 UNC5CLQ8IV45 518 aa23.37■■□□□ 1.33
HSPG2-208ENST00000471322 NSD2O96028 1365 aa23.36■■□□□ 1.33
HSPG2-208ENST00000471322 PLCH1Q4KWH8 1693 aa23.36■■□□□ 1.33
HSPG2-208ENST00000471322 SLIT3O75094 1523 aa23.35■■□□□ 1.33
HSPG2-208ENST00000471322 FYB1O15117 783 aa23.35■■□□□ 1.33
HSPG2-208ENST00000471322 TRPC5Q9UL62 973 aaPredicted RBP23.35■■□□□ 1.33
HSPG2-208ENST00000471322 USP31Q70CQ4 1352 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms