RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 HSPA5P11021 654 aaKnown RBP27.71■■■□□ 2.03
HDAC7-220ENST00000471235 TMF1P82094 1093 aa27.71■■■□□ 2.03
HDAC7-220ENST00000471235 CPSF1Q10570 1443 aaKnown RBP27.71■■■□□ 2.03
HDAC7-220ENST00000471235 SSH2Q76I76 1423 aa27.68■■■□□ 2.02
HDAC7-220ENST00000471235 PAK3O75914 559 aaPredicted RBP27.68■■■□□ 2.02
HDAC7-220ENST00000471235 LMOD2Q6P5Q4 547 aa27.68■■■□□ 2.02
HDAC7-220ENST00000471235 BRD4O60885 1362 aaPredicted RBP27.68■■■□□ 2.02
HDAC7-220ENST00000471235 MEX3CQ5U5Q3 659 aaKnown RBP27.67■■■□□ 2.02
HDAC7-220ENST00000471235 NINLQ9Y2I6 1382 aa27.67■■■□□ 2.02
HDAC7-220ENST00000471235 PLCH1Q4KWH8 1693 aa27.67■■■□□ 2.02
HDAC7-220ENST00000471235 USP54Q70EL1 1684 aa27.67■■■□□ 2.02
HDAC7-220ENST00000471235 PHF23Q9BUL5 403 aaPredicted RBP27.66■■■□□ 2.02
HDAC7-220ENST00000471235 TMC1Q8TDI8 760 aa27.64■■■□□ 2.02
HDAC7-220ENST00000471235 KTN1Q86UP2 1357 aaKnown RBP27.63■■■□□ 2.01
HDAC7-220ENST00000471235 SLC12A5Q9H2X9 1139 aa27.63■■■□□ 2.01
HDAC7-220ENST00000471235 A0A1W2PP64 1363 aa27.62■■■□□ 2.01
HDAC7-220ENST00000471235 ADAMTS2O95450 1211 aa27.62■■■□□ 2.01
HDAC7-220ENST00000471235 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.61■■■□□ 2.01
HDAC7-220ENST00000471235 CDCA8Q53HL2 280 aa27.61■■■□□ 2.01
HDAC7-220ENST00000471235 CABLES1Q8TDN4 633 aa27.61■■■□□ 2.01
HDAC7-220ENST00000471235 NWD2Q9ULI1 1742 aa27.61■■■□□ 2.01
HDAC7-220ENST00000471235 KIF20BQ96Q89 1820 aa27.6■■■□□ 2.01
HDAC7-220ENST00000471235 PLEKHG5O94827 1062 aa27.6■■■□□ 2.01
HDAC7-220ENST00000471235 ZNF692Q9BU19 519 aaPredicted RBP27.6■■■□□ 2.01
HDAC7-220ENST00000471235 COL14A1Q05707 1796 aaKnown RBP27.58■■■□□ 2.01
HDAC7-220ENST00000471235 RGS17Q9UGC6 210 aaPredicted RBP27.58■■■□□ 2.01
HDAC7-220ENST00000471235 EDC4Q6P2E9 1401 aaKnown RBP27.58■■■□□ 2
HDAC7-220ENST00000471235 SLIT3O75094 1523 aa27.57■■■□□ 2
HDAC7-220ENST00000471235 HDGFL2Q7Z4V5 671 aaPredicted RBP27.57■■■□□ 2
HDAC7-220ENST00000471235 C8orf37Q96NL8 207 aa27.57■■■□□ 2
HDAC7-220ENST00000471235 TTC21BQ7Z4L5 1316 aa27.57■■■□□ 2
HDAC7-220ENST00000471235 NRAPQ86VF7 1730 aa27.56■■■□□ 2
HDAC7-220ENST00000471235 NUTM2GQ5VZR2 741 aa27.56■■■□□ 2
HDAC7-220ENST00000471235 ABTB2Q8N961 1025 aa27.56■■■□□ 2
HDAC7-220ENST00000471235 ANKRD36BQ8N2N9 1353 aa27.56■■■□□ 2
HDAC7-220ENST00000471235 HAP1P54257 671 aaPredicted RBP27.55■■■□□ 2
HDAC7-220ENST00000471235 TERF2IPQ9NYB0 399 aa27.55■■■□□ 2
HDAC7-220ENST00000471235 AFF2P51816 1311 aa27.55■■■□□ 2
HDAC7-220ENST00000471235 USP19O94966 1318 aa27.54■■■□□ 2
HDAC7-220ENST00000471235 TTC21AQ8NDW8 1320 aa27.54■■■□□ 2
HDAC7-220ENST00000471235 SLIT2O94813 1529 aa27.51■■□□□ 1.99
HDAC7-220ENST00000471235 NGLY1Q96IV0 654 aa27.49■■□□□ 1.99
HDAC7-220ENST00000471235 LTN1O94822 1766 aa27.49■■□□□ 1.99
HDAC7-220ENST00000471235 NLRP13Q86W25 1043 aa27.48■■□□□ 1.99
HDAC7-220ENST00000471235 LMO7Q8WWI1 1683 aa27.48■■□□□ 1.99
HDAC7-220ENST00000471235 NFAT5O94916 1531 aa27.47■■□□□ 1.99
HDAC7-220ENST00000471235 C11orf95C9JLR9 678 aaPredicted RBP27.47■■□□□ 1.99
HDAC7-220ENST00000471235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.47■■□□□ 1.99
HDAC7-220ENST00000471235 POLR3GLQ9BT43 218 aa27.47■■□□□ 1.99
HDAC7-220ENST00000471235 NLRP6P59044 892 aa27.46■■□□□ 1.99
HDAC7-220ENST00000471235 ZNF772Q68DY9 489 aaPredicted RBP27.46■■□□□ 1.99
HDAC7-220ENST00000471235 POTEAQ6S8J7 498 aa27.46■■□□□ 1.99
HDAC7-220ENST00000471235 RGPD5Q99666 1765 aa27.45■■□□□ 1.99
HDAC7-220ENST00000471235 BCL9LQ86UU0 1499 aa27.45■■□□□ 1.99
HDAC7-220ENST00000471235 ANKRD26Q9UPS8 1709 aa27.45■■□□□ 1.99
HDAC7-220ENST00000471235 FNBP4Q8N3X1 1017 aaPredicted RBP27.45■■□□□ 1.98
HDAC7-220ENST00000471235 USP31Q70CQ4 1352 aa27.45■■□□□ 1.98
HDAC7-220ENST00000471235 COL18A1P39060 1754 aa27.45■■□□□ 1.98
HDAC7-220ENST00000471235 OVOS2A0A0J9YW53 1432 aa27.44■■□□□ 1.98
HDAC7-220ENST00000471235 OVOS2Q6IE36 1432 aa27.44■■□□□ 1.98
HDAC7-220ENST00000471235 NME9Q86XW9 330 aa27.44■■□□□ 1.98
HDAC7-220ENST00000471235 KIAA0232Q92628 1395 aa27.44■■□□□ 1.98
HDAC7-220ENST00000471235 ZRANB1Q9UGI0 708 aa27.42■■□□□ 1.98
HDAC7-220ENST00000471235 USP21Q9UK80 565 aa27.42■■□□□ 1.98
HDAC7-220ENST00000471235 KIF7Q2M1P5 1343 aa27.41■■□□□ 1.98
HDAC7-220ENST00000471235 ATRNO75882 1429 aa27.41■■□□□ 1.98
HDAC7-220ENST00000471235 NSD3Q9BZ95 1437 aa27.41■■□□□ 1.98
HDAC7-220ENST00000471235 CPDO75976 1380 aa27.41■■□□□ 1.98
HDAC7-220ENST00000471235 FAM83GA6ND36 823 aa27.4■■□□□ 1.98
HDAC7-220ENST00000471235 ILDR2Q71H61 639 aa27.4■■□□□ 1.98
HDAC7-220ENST00000471235 GCP02774 474 aa27.39■■□□□ 1.98
HDAC7-220ENST00000471235 PRDM11Q9NQV5 511 aa27.39■■□□□ 1.98
HDAC7-220ENST00000471235 ZC3H6P61129 1189 aaKnown RBP27.38■■□□□ 1.97
HDAC7-220ENST00000471235 GLI3P10071 1580 aa27.37■■□□□ 1.97
HDAC7-220ENST00000471235 CARD14Q9BXL6 1004 aa27.36■■□□□ 1.97
HDAC7-220ENST00000471235 CCDC7Q96M83 1385 aa27.35■■□□□ 1.97
HDAC7-220ENST00000471235 CAMTA1Q9Y6Y1 1673 aa27.35■■□□□ 1.97
HDAC7-220ENST00000471235 ABCC6O95255 1503 aa27.35■■□□□ 1.97
HDAC7-220ENST00000471235 CHRNA2Q15822 529 aa27.34■■□□□ 1.97
HDAC7-220ENST00000471235 UNC5CLQ8IV45 518 aa27.34■■□□□ 1.97
HDAC7-220ENST00000471235 QTRT2Q9H974 415 aaKnown RBP27.33■■□□□ 1.97
HDAC7-220ENST00000471235 TRPC5Q9UL62 973 aaPredicted RBP27.33■■□□□ 1.97
HDAC7-220ENST00000471235 SOX12O15370 315 aa27.32■■□□□ 1.96
HDAC7-220ENST00000471235 KCNH5Q8NCM2 988 aa27.32■■□□□ 1.96
HDAC7-220ENST00000471235 BTG4Q9NY30 223 aa27.32■■□□□ 1.96
HDAC7-220ENST00000471235 CDK12Q9NYV4 1490 aaPredicted RBP27.31■■□□□ 1.96
HDAC7-220ENST00000471235 ZEB1P37275 1124 aaPredicted RBP27.3■■□□□ 1.96
HDAC7-220ENST00000471235 WASHC2AQ641Q2 1341 aa27.3■■□□□ 1.96
HDAC7-220ENST00000471235 FYB1O15117 783 aa27.29■■□□□ 1.96
HDAC7-220ENST00000471235 WNK3Q9BYP7 1800 aa27.29■■□□□ 1.96
HDAC7-220ENST00000471235 COL5A2P05997 1499 aaPredicted RBP27.28■■□□□ 1.96
HDAC7-220ENST00000471235 AATKQ6ZMQ8 1374 aa27.28■■□□□ 1.96
HDAC7-220ENST00000471235 PANK3Q9H999 370 aa27.28■■□□□ 1.96
HDAC7-220ENST00000471235 BRWD3Q6RI45 1802 aa27.27■■□□□ 1.96
HDAC7-220ENST00000471235 RGS12O14924 1447 aa27.27■■□□□ 1.96
HDAC7-220ENST00000471235 ZBTB7CA1YPR0 619 aa27.27■■□□□ 1.96
HDAC7-220ENST00000471235 RXRBP28702 533 aa27.27■■□□□ 1.96
HDAC7-220ENST00000471235 COG3Q96JB2 828 aa27.27■■□□□ 1.96
HDAC7-220ENST00000471235 GGNBP2Q9H3C7 697 aa27.27■■□□□ 1.96
HDAC7-220ENST00000471235 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms