RNA–Protein interactions for RNA: ENST00000469451.1

SNRPE-203, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 3

Gene SNRPE, Length 248 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-203ENST00000469451 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
SNRPE-203ENST00000469451 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
SNRPE-203ENST00000469451 ATP7BP35670 1465 aa16.48■□□□□ 0.23
SNRPE-203ENST00000469451 PPIP5K1Q6PFW1 1433 aa16.48■□□□□ 0.23
SNRPE-203ENST00000469451 EVA1CP58658 441 aa16.48■□□□□ 0.23
SNRPE-203ENST00000469451 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNRPE-203ENST00000469451 CABP1Q9NZU7 370 aa16.48■□□□□ 0.23
SNRPE-203ENST00000469451 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
SNRPE-203ENST00000469451 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
SNRPE-203ENST00000469451 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
SNRPE-203ENST00000469451 BCL9LQ86UU0 1499 aa16.47■□□□□ 0.23
SNRPE-203ENST00000469451 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
SNRPE-203ENST00000469451 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
SNRPE-203ENST00000469451 RGS12O14924 1447 aa16.45■□□□□ 0.22
SNRPE-203ENST00000469451 SLIT2O94813 1529 aa16.45■□□□□ 0.22
SNRPE-203ENST00000469451 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
SNRPE-203ENST00000469451 PCGF6Q9BYE7 350 aa16.44■□□□□ 0.22
SNRPE-203ENST00000469451 ARHGEF28Q8N1W1 1705 aaKnown RBP16.43■□□□□ 0.22
SNRPE-203ENST00000469451 NLRP6P59044 892 aa16.43■□□□□ 0.22
SNRPE-203ENST00000469451 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
SNRPE-203ENST00000469451 ZC3H6P61129 1189 aaKnown RBP16.42■□□□□ 0.22
SNRPE-203ENST00000469451 KCNH5Q8NCM2 988 aa16.42■□□□□ 0.22
SNRPE-203ENST00000469451 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
SNRPE-203ENST00000469451 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
SNRPE-203ENST00000469451 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
SNRPE-203ENST00000469451 SEPT12Q8IYM1 358 aa16.41■□□□□ 0.22
SNRPE-203ENST00000469451 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
SNRPE-203ENST00000469451 SBNO2Q9Y2G9 1366 aa16.4■□□□□ 0.22
SNRPE-203ENST00000469451 ITSN1Q15811 1721 aa16.4■□□□□ 0.22
SNRPE-203ENST00000469451 PUS7Q96PZ0 661 aaKnown RBP16.4■□□□□ 0.22
SNRPE-203ENST00000469451 STRN4Q9NRL3 753 aa16.4■□□□□ 0.22
SNRPE-203ENST00000469451 RALGAPBQ86X10 1494 aa16.4■□□□□ 0.22
SNRPE-203ENST00000469451 TTC21AQ8NDW8 1320 aa16.4■□□□□ 0.22
SNRPE-203ENST00000469451 GCP02774 474 aa16.39■□□□□ 0.21
SNRPE-203ENST00000469451 KRT27Q7Z3Y8 459 aa16.39■□□□□ 0.21
SNRPE-203ENST00000469451 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
SNRPE-203ENST00000469451 ZBTB7CA1YPR0 619 aa16.38■□□□□ 0.21
SNRPE-203ENST00000469451 ONECUT3O60422 494 aaPredicted RBP16.37■□□□□ 0.21
SNRPE-203ENST00000469451 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
SNRPE-203ENST00000469451 USP6P35125 1406 aa16.36■□□□□ 0.21
SNRPE-203ENST00000469451 TMF1P82094 1093 aa16.36■□□□□ 0.21
SNRPE-203ENST00000469451 CHRNA2Q15822 529 aa16.36■□□□□ 0.21
SNRPE-203ENST00000469451 CCER1Q8TC90 406 aaPredicted RBP16.36■□□□□ 0.21
SNRPE-203ENST00000469451 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
SNRPE-203ENST00000469451 TRPM1Q7Z4N2 1603 aa16.35■□□□□ 0.21
SNRPE-203ENST00000469451 USP19O94966 1318 aa16.35■□□□□ 0.21
SNRPE-203ENST00000469451 SPATA31A5Q5VU36 1347 aa16.35■□□□□ 0.21
SNRPE-203ENST00000469451 SPATA31A7Q8IWB4 1347 aa16.35■□□□□ 0.21
SNRPE-203ENST00000469451 CPDO75976 1380 aa16.35■□□□□ 0.21
SNRPE-203ENST00000469451 NINLQ9Y2I6 1382 aa16.35■□□□□ 0.21
SNRPE-203ENST00000469451 C11orf95C9JLR9 678 aaPredicted RBP16.34■□□□□ 0.21
SNRPE-203ENST00000469451 THRAP3Q9Y2W1 955 aaKnown RBP16.34■□□□□ 0.21
SNRPE-203ENST00000469451 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
SNRPE-203ENST00000469451 PDE3BQ13370 1112 aa16.33■□□□□ 0.2
SNRPE-203ENST00000469451 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
SNRPE-203ENST00000469451 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
SNRPE-203ENST00000469451 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.2
SNRPE-203ENST00000469451 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
SNRPE-203ENST00000469451 TCP11L2Q8N4U5 519 aa16.32■□□□□ 0.2
SNRPE-203ENST00000469451 QRICH2Q9H0J4 1663 aa16.32■□□□□ 0.2
SNRPE-203ENST00000469451 SPATA31A1Q5TZJ5 1347 aa16.31■□□□□ 0.2
SNRPE-203ENST00000469451 CSB-PGBD3P0DP91 1061 aa16.31■□□□□ 0.2
SNRPE-203ENST00000469451 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
SNRPE-203ENST00000469451 TRPM3Q9HCF6 1732 aaPredicted RBP16.31■□□□□ 0.2
SNRPE-203ENST00000469451 BLMP54132 1417 aaPredicted RBP16.3■□□□□ 0.2
SNRPE-203ENST00000469451 BAG6P46379 1132 aa16.3■□□□□ 0.2
SNRPE-203ENST00000469451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNRPE-203ENST00000469451 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.3■□□□□ 0.2
SNRPE-203ENST00000469451 MARF1Q9Y4F3 1742 aaKnown RBP16.29■□□□□ 0.2
SNRPE-203ENST00000469451 BARGINQ6ZT62 677 aa16.29■□□□□ 0.2
SNRPE-203ENST00000469451 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
SNRPE-203ENST00000469451 ALS2Q96Q42 1657 aa16.29■□□□□ 0.2
SNRPE-203ENST00000469451 NWD2Q9ULI1 1742 aa16.28■□□□□ 0.2
SNRPE-203ENST00000469451 AATKQ6ZMQ8 1374 aa16.28■□□□□ 0.2
SNRPE-203ENST00000469451 SOX12O15370 315 aa16.28■□□□□ 0.2
SNRPE-203ENST00000469451 FAM196AQ6ZSG2 479 aa16.28■□□□□ 0.2
SNRPE-203ENST00000469451 CDCA7Q9BWT1 371 aaPredicted RBP16.28■□□□□ 0.2
SNRPE-203ENST00000469451 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.2
SNRPE-203ENST00000469451 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.2
SNRPE-203ENST00000469451 USP47Q96K76 1375 aa16.26■□□□□ 0.19
SNRPE-203ENST00000469451 LARP1Q6PKG0 1096 aaKnown RBP16.26■□□□□ 0.19
SNRPE-203ENST00000469451 CPSF1Q10570 1443 aaKnown RBP16.26■□□□□ 0.19
SNRPE-203ENST00000469451 SSH2Q76I76 1423 aa16.26■□□□□ 0.19
SNRPE-203ENST00000469451 COG3Q96JB2 828 aa16.25■□□□□ 0.19
SNRPE-203ENST00000469451 EDC4Q6P2E9 1401 aaKnown RBP16.25■□□□□ 0.19
SNRPE-203ENST00000469451 GLI3P10071 1580 aa16.24■□□□□ 0.19
SNRPE-203ENST00000469451 ARHGEF25Q86VW2 580 aa16.23■□□□□ 0.19
SNRPE-203ENST00000469451 TESK2Q96S53 571 aa16.23■□□□□ 0.19
SNRPE-203ENST00000469451 PLCH1Q4KWH8 1693 aa16.23■□□□□ 0.19
SNRPE-203ENST00000469451 CRB1P82279 1406 aa16.22■□□□□ 0.19
SNRPE-203ENST00000469451 WDR17Q8IZU2 1322 aa16.21■□□□□ 0.19
SNRPE-203ENST00000469451 DDB1Q16531 1140 aa16.21■□□□□ 0.19
SNRPE-203ENST00000469451 USP31Q70CQ4 1352 aa16.21■□□□□ 0.19
SNRPE-203ENST00000469451 ABCA3Q99758 1704 aa16.2■□□□□ 0.18
SNRPE-203ENST00000469451 EIF4G2P78344 907 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNRPE-203ENST00000469451 NME9Q86XW9 330 aa16.2■□□□□ 0.18
SNRPE-203ENST00000469451 NRKQ7Z2Y5 1582 aa16.19■□□□□ 0.18
SNRPE-203ENST00000469451 A0A1W2PP64 1363 aa16.19■□□□□ 0.18
SNRPE-203ENST00000469451 CARD10Q9BWT7 1032 aa16.19■□□□□ 0.18
SNRPE-203ENST00000469451 COL5A2P05997 1499 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms