RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 SPATA31A3Q5VYP0 1347 aa7.55□□□□□ -1.2
SND1-207ENST00000468621 BRWD3Q6RI45 1802 aa7.55□□□□□ -1.2
SND1-207ENST00000468621 TNS3Q68CZ2 1445 aa7.55□□□□□ -1.2
SND1-207ENST00000468621 NUTM2BA6NNL0 878 aaPredicted RBP7.55□□□□□ -1.2
SND1-207ENST00000468621 NUTM2EB1AL46 878 aaPredicted RBP7.55□□□□□ -1.2
SND1-207ENST00000468621 NUTM2AQ8IVF1 878 aaPredicted RBP7.55□□□□□ -1.2
SND1-207ENST00000468621 PMFBP1Q8TBY8 1022 aa7.55□□□□□ -1.2
SND1-207ENST00000468621 CDK19Q9BWU1 502 aa7.55□□□□□ -1.2
SND1-207ENST00000468621 RGPD5Q99666 1765 aa7.55□□□□□ -1.2
SND1-207ENST00000468621 NRAPQ86VF7 1730 aa7.55□□□□□ -1.2
SND1-207ENST00000468621 NRKQ7Z2Y5 1582 aa7.54□□□□□ -1.2
SND1-207ENST00000468621 KRT28Q7Z3Y7 464 aa7.54□□□□□ -1.2
SND1-207ENST00000468621 NUDT16Q96DE0 195 aaKnown RBP7.54□□□□□ -1.2
SND1-207ENST00000468621 SBNO1A3KN83 1393 aa7.54□□□□□ -1.2
SND1-207ENST00000468621 PIK3C2AO00443 1686 aa7.54□□□□□ -1.2
SND1-207ENST00000468621 WASHC2AQ641Q2 1341 aa7.53□□□□□ -1.2
SND1-207ENST00000468621 POLR3AO14802 1390 aaPredicted RBP7.53□□□□□ -1.2
SND1-207ENST00000468621 SBNO2Q9Y2G9 1366 aa7.53□□□□□ -1.2
SND1-207ENST00000468621 AFF2P51816 1311 aa7.52□□□□□ -1.2
SND1-207ENST00000468621 PPIP5K1Q6PFW1 1433 aa7.52□□□□□ -1.2
SND1-207ENST00000468621 COL14A1Q05707 1796 aaKnown RBP7.52□□□□□ -1.21
SND1-207ENST00000468621 USP54Q70EL1 1684 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 ARHGEF10O15013 1369 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 CCDC7Q96M83 1385 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 ADAMTS2O95450 1211 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 PSME1Q06323 249 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 CARD11Q9BXL7 1154 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 CABP2Q9NPB3 220 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 PPP4R2Q9NY27 417 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 ACEP12821 1306 aa7.52□□□□□ -1.21
SND1-207ENST00000468621 LTN1O94822 1766 aa7.51□□□□□ -1.21
SND1-207ENST00000468621 MYOM1P52179 1685 aa7.51□□□□□ -1.21
SND1-207ENST00000468621 PLEKHG3A1L390 1219 aa7.51□□□□□ -1.21
SND1-207ENST00000468621 SRPK2P78362 688 aaKnown RBP7.51□□□□□ -1.21
SND1-207ENST00000468621 NGDNQ8NEJ9 315 aaKnown RBP7.51□□□□□ -1.21
SND1-207ENST00000468621 C8orf37Q96NL8 207 aa7.51□□□□□ -1.21
SND1-207ENST00000468621 CCDC61Q9Y6R9 512 aa7.51□□□□□ -1.21
SND1-207ENST00000468621 SLIT2O94813 1529 aa7.51□□□□□ -1.21
SND1-207ENST00000468621 FANCIQ9NVI1 1328 aa7.51□□□□□ -1.21
SND1-207ENST00000468621 BCL9LQ86UU0 1499 aa7.5□□□□□ -1.21
SND1-207ENST00000468621 ERICH6Q7L0X2 663 aa7.5□□□□□ -1.21
SND1-207ENST00000468621 CABLES1Q8TDN4 633 aa7.5□□□□□ -1.21
SND1-207ENST00000468621 COL18A1P39060 1754 aa7.5□□□□□ -1.21
SND1-207ENST00000468621 GLI3P10071 1580 aa7.5□□□□□ -1.21
SND1-207ENST00000468621 EVC2Q86UK5 1308 aa7.5□□□□□ -1.21
SND1-207ENST00000468621 LMO7Q8WWI1 1683 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 IRX6P78412 446 aaPredicted RBP7.49□□□□□ -1.21
SND1-207ENST00000468621 FNBP4Q8N3X1 1017 aaPredicted RBP7.49□□□□□ -1.21
SND1-207ENST00000468621 NGLY1Q96IV0 654 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 PRKRIP1Q9H875 184 aaPredicted RBP7.49□□□□□ -1.21
SND1-207ENST00000468621 MRS2Q9HD23 443 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 ZRANB1Q9UGI0 708 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 KIF20BQ96Q89 1820 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 ATRNO75882 1429 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 USP6P35125 1406 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 SSH2Q76I76 1423 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 CD163L1Q9NR16 1453 aa7.49□□□□□ -1.21
SND1-207ENST00000468621 CDK12Q9NYV4 1490 aaPredicted RBP7.49□□□□□ -1.21
SND1-207ENST00000468621 KAT6BQ8WYB5 2073 aa7.48□□□□□ -1.21
SND1-207ENST00000468621 WNK3Q9BYP7 1800 aa7.48□□□□□ -1.21
SND1-207ENST00000468621 LMOD2Q6P5Q4 547 aa7.48□□□□□ -1.21
SND1-207ENST00000468621 FAM9BQ8IZU0 186 aa7.48□□□□□ -1.21
SND1-207ENST00000468621 TESK2Q96S53 571 aa7.48□□□□□ -1.21
SND1-207ENST00000468621 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
SND1-207ENST00000468621 ZBED9Q6R2W3 1325 aa7.48□□□□□ -1.21
SND1-207ENST00000468621 ATAD2Q6PL18 1390 aa7.47□□□□□ -1.21
SND1-207ENST00000468621 USP47Q96K76 1375 aa7.47□□□□□ -1.21
SND1-207ENST00000468621 RGS12O14924 1447 aa7.47□□□□□ -1.21
SND1-207ENST00000468621 CPSF1Q10570 1443 aaKnown RBP7.47□□□□□ -1.21
SND1-207ENST00000468621 ST20-MTHFSA0A0A6YYL1 179 aa7.47□□□□□ -1.21
SND1-207ENST00000468621 PAK3O75914 559 aaPredicted RBP7.47□□□□□ -1.21
SND1-207ENST00000468621 PLEKHG5O94827 1062 aa7.47□□□□□ -1.21
SND1-207ENST00000468621 QTRT2Q9H974 415 aaKnown RBP7.47□□□□□ -1.21
SND1-207ENST00000468621 USP21Q9UK80 565 aa7.47□□□□□ -1.21
SND1-207ENST00000468621 SLIT3O75094 1523 aa7.47□□□□□ -1.21
SND1-207ENST00000468621 BRD4O60885 1362 aaPredicted RBP7.46□□□□□ -1.21
SND1-207ENST00000468621 MAP2P11137 1827 aaKnown RBP7.46□□□□□ -1.21
SND1-207ENST00000468621 C11orf95C9JLR9 678 aaPredicted RBP7.46□□□□□ -1.22
SND1-207ENST00000468621 CCDC184Q52MB2 194 aa7.46□□□□□ -1.22
SND1-207ENST00000468621 IFFO2Q5TF58 517 aa7.46□□□□□ -1.22
SND1-207ENST00000468621 USP19O94966 1318 aa7.46□□□□□ -1.22
SND1-207ENST00000468621 RGPD2P0DJD1 1756 aa7.46□□□□□ -1.22
SND1-207ENST00000468621 FAM83GA6ND36 823 aa7.45□□□□□ -1.22
SND1-207ENST00000468621 MSH5O43196 834 aa7.45□□□□□ -1.22
SND1-207ENST00000468621 HAP1P54257 671 aaPredicted RBP7.45□□□□□ -1.22
SND1-207ENST00000468621 RBM6P78332 1123 aaKnown RBP7.45□□□□□ -1.22
SND1-207ENST00000468621 NUTM2GQ5VZR2 741 aa7.45□□□□□ -1.22
SND1-207ENST00000468621 KIF7Q2M1P5 1343 aa7.45□□□□□ -1.22
SND1-207ENST00000468621 THSD7AQ9UPZ6 1657 aa7.44□□□□□ -1.22
SND1-207ENST00000468621 ANKRD26Q9UPS8 1709 aa7.44□□□□□ -1.22
SND1-207ENST00000468621 NFAT5O94916 1531 aa7.44□□□□□ -1.22
SND1-207ENST00000468621 SBF2Q86WG5 1849 aa7.44□□□□□ -1.22
SND1-207ENST00000468621 UNC5CLQ8IV45 518 aa7.44□□□□□ -1.22
SND1-207ENST00000468621 ABTB2Q8N961 1025 aa7.44□□□□□ -1.22
SND1-207ENST00000468621 TRPC5Q9UL62 973 aaPredicted RBP7.44□□□□□ -1.22
SND1-207ENST00000468621 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
SND1-207ENST00000468621 KTN1Q86UP2 1357 aaKnown RBP7.44□□□□□ -1.22
SND1-207ENST00000468621 KIAA0232Q92628 1395 aa7.44□□□□□ -1.22
SND1-207ENST00000468621 PUS7Q96PZ0 661 aaKnown RBP7.43□□□□□ -1.22
SND1-207ENST00000468621 ZNF692Q9BU19 519 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms