RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 CERKQ8TCT0 537 aa16.23■□□□□ 0.19
RNF13-208ENST00000467996 ALS2Q96Q42 1657 aa16.23■□□□□ 0.19
RNF13-208ENST00000467996 PXDNQ92626 1479 aa16.22■□□□□ 0.19
RNF13-208ENST00000467996 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
RNF13-208ENST00000467996 PPP4R3CPQ6ZMV5 832 aa16.22■□□□□ 0.19
RNF13-208ENST00000467996 NPC1L1Q9UHC9 1359 aa16.22■□□□□ 0.19
RNF13-208ENST00000467996 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
RNF13-208ENST00000467996 BRD4O60885 1362 aaPredicted RBP16.21■□□□□ 0.19
RNF13-208ENST00000467996 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
RNF13-208ENST00000467996 FOXO3O43524 673 aa16.2■□□□□ 0.18
RNF13-208ENST00000467996 NSD2O96028 1365 aa16.2■□□□□ 0.18
RNF13-208ENST00000467996 TTC21BQ7Z4L5 1316 aa16.19■□□□□ 0.18
RNF13-208ENST00000467996 TOM1O60784 492 aa16.19■□□□□ 0.18
RNF13-208ENST00000467996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.19■□□□□ 0.18
RNF13-208ENST00000467996 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
RNF13-208ENST00000467996 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
RNF13-208ENST00000467996 TTC21AQ8NDW8 1320 aa16.19■□□□□ 0.18
RNF13-208ENST00000467996 PARD3Q8TEW0 1356 aa16.18■□□□□ 0.18
RNF13-208ENST00000467996 PSME1Q06323 249 aa16.18■□□□□ 0.18
RNF13-208ENST00000467996 CC2D1BQ5T0F9 858 aaKnown RBP16.18■□□□□ 0.18
RNF13-208ENST00000467996 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
RNF13-208ENST00000467996 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
RNF13-208ENST00000467996 ANP32CO43423 234 aa16.17■□□□□ 0.18
RNF13-208ENST00000467996 XPCQ01831 940 aaPredicted RBP16.17■□□□□ 0.18
RNF13-208ENST00000467996 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
RNF13-208ENST00000467996 CNGB1Q14028 1251 aaPredicted RBP16.17■□□□□ 0.18
RNF13-208ENST00000467996 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
RNF13-208ENST00000467996 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
RNF13-208ENST00000467996 CRYBG1Q9Y4K1 1723 aa16.16■□□□□ 0.18
RNF13-208ENST00000467996 UBAP1LF5GYI3 381 aa16.16■□□□□ 0.18
RNF13-208ENST00000467996 FYB1O15117 783 aa16.16■□□□□ 0.18
RNF13-208ENST00000467996 KRT28Q7Z3Y7 464 aa16.16■□□□□ 0.18
RNF13-208ENST00000467996 NME9Q86XW9 330 aa16.16■□□□□ 0.18
RNF13-208ENST00000467996 COL16A1Q07092 1604 aaPredicted RBP16.16■□□□□ 0.18
RNF13-208ENST00000467996 SBNO1A3KN83 1393 aa16.15■□□□□ 0.18
RNF13-208ENST00000467996 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
RNF13-208ENST00000467996 GGNBP2Q9H3C7 697 aa16.15■□□□□ 0.18
RNF13-208ENST00000467996 PRKRIP1Q9H875 184 aaPredicted RBP16.15■□□□□ 0.18
RNF13-208ENST00000467996 PHRF1Q9P1Y6 1649 aaKnown RBP16.15■□□□□ 0.18
RNF13-208ENST00000467996 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
RNF13-208ENST00000467996 PAK3O75914 559 aaPredicted RBP16.14■□□□□ 0.17
RNF13-208ENST00000467996 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
RNF13-208ENST00000467996 MED1Q15648 1581 aaPredicted RBP16.13■□□□□ 0.17
RNF13-208ENST00000467996 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
RNF13-208ENST00000467996 SOS2Q07890 1332 aaPredicted RBP16.13■□□□□ 0.17
RNF13-208ENST00000467996 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
RNF13-208ENST00000467996 PIP4K2BP78356 416 aa16.12■□□□□ 0.17
RNF13-208ENST00000467996 RALBP1Q15311 655 aa16.12■□□□□ 0.17
RNF13-208ENST00000467996 MIER1Q8N108 512 aa16.12■□□□□ 0.17
RNF13-208ENST00000467996 SLIT3O75094 1523 aa16.11■□□□□ 0.17
RNF13-208ENST00000467996 LTN1O94822 1766 aa16.1■□□□□ 0.17
RNF13-208ENST00000467996 COL22A1Q8NFW1 1626 aaPredicted RBP16.1■□□□□ 0.17
RNF13-208ENST00000467996 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
RNF13-208ENST00000467996 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
RNF13-208ENST00000467996 SPATA31A3Q5VYP0 1347 aa16.1■□□□□ 0.17
RNF13-208ENST00000467996 COG3Q96JB2 828 aa16.09■□□□□ 0.17
RNF13-208ENST00000467996 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
RNF13-208ENST00000467996 ARHGEF10O15013 1369 aa16.09■□□□□ 0.17
RNF13-208ENST00000467996 NLRP6P59044 892 aa16.08■□□□□ 0.16
RNF13-208ENST00000467996 NUTM2GQ5VZR2 741 aa16.08■□□□□ 0.16
RNF13-208ENST00000467996 NFAT5O94916 1531 aa16.08■□□□□ 0.16
RNF13-208ENST00000467996 SHPRHQ149N8 1683 aa16.07■□□□□ 0.16
RNF13-208ENST00000467996 PEAK1Q9H792 1746 aa16.06■□□□□ 0.16
RNF13-208ENST00000467996 USP19O94966 1318 aa16.06■□□□□ 0.16
RNF13-208ENST00000467996 PPP2R1AP30153 589 aa16.06■□□□□ 0.16
RNF13-208ENST00000467996 TNNT2P45379 298 aaPredicted RBP16.06■□□□□ 0.16
RNF13-208ENST00000467996 LMOD2Q6P5Q4 547 aa16.06■□□□□ 0.16
RNF13-208ENST00000467996 SMG6Q86US8 1419 aaKnown RBP16.05■□□□□ 0.16
RNF13-208ENST00000467996 AATKQ6ZMQ8 1374 aa16.05■□□□□ 0.16
RNF13-208ENST00000467996 NLRP13Q86W25 1043 aa16.05■□□□□ 0.16
RNF13-208ENST00000467996 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
RNF13-208ENST00000467996 PNPLA6Q8IY17 1366 aa16.02■□□□□ 0.16
RNF13-208ENST00000467996 LRRC59Q96AG4 307 aaKnown RBP16.02■□□□□ 0.16
RNF13-208ENST00000467996 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
RNF13-208ENST00000467996 SOX12O15370 315 aa16.01■□□□□ 0.15
RNF13-208ENST00000467996 FBLN1P23142 703 aa16.01■□□□□ 0.15
RNF13-208ENST00000467996 CDK12Q9NYV4 1490 aaPredicted RBP16.01■□□□□ 0.15
RNF13-208ENST00000467996 PLEKHG5O94827 1062 aa16■□□□□ 0.15
RNF13-208ENST00000467996 KCNH5Q8NCM2 988 aa16■□□□□ 0.15
RNF13-208ENST00000467996 RGPD5Q99666 1765 aa16■□□□□ 0.15
RNF13-208ENST00000467996 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
RNF13-208ENST00000467996 RRS1Q15050 365 aaKnown RBP15.99■□□□□ 0.15
RNF13-208ENST00000467996 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
RNF13-208ENST00000467996 POLKQ9UBT6 870 aa15.99■□□□□ 0.15
RNF13-208ENST00000467996 COL18A1P39060 1754 aa15.98■□□□□ 0.15
RNF13-208ENST00000467996 GCP02774 474 aa15.98■□□□□ 0.15
RNF13-208ENST00000467996 MTHFSP49914 203 aa15.98■□□□□ 0.15
RNF13-208ENST00000467996 CABLES1Q8TDN4 633 aa15.98■□□□□ 0.15
RNF13-208ENST00000467996 EMILIN1Q9Y6C2 1016 aa15.98■□□□□ 0.15
RNF13-208ENST00000467996 MAP3K19Q56UN5 1328 aa15.97■□□□□ 0.15
RNF13-208ENST00000467996 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
RNF13-208ENST00000467996 ABCC6O95255 1503 aa15.97■□□□□ 0.15
RNF13-208ENST00000467996 RTL1A6NKG5 1358 aa15.96■□□□□ 0.15
RNF13-208ENST00000467996 LMO7Q8WWI1 1683 aa15.95■□□□□ 0.14
RNF13-208ENST00000467996 FLT4P35916 1363 aa15.95■□□□□ 0.14
RNF13-208ENST00000467996 KIF24Q5T7B8 1368 aa15.95■□□□□ 0.14
RNF13-208ENST00000467996 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
RNF13-208ENST00000467996 HSPA1LP34931 641 aa15.94■□□□□ 0.14
RNF13-208ENST00000467996 CPDO75976 1380 aa15.94■□□□□ 0.14
RNF13-208ENST00000467996 JCADQ9P266 1359 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms