RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 ATP7BP35670 1465 aa14.91□□□□□ -0.02
SSR3-205ENST00000467789 BCL9LQ86UU0 1499 aa14.91□□□□□ -0.02
SSR3-205ENST00000467789 L3MBTL2Q969R5 705 aa14.91□□□□□ -0.02
SSR3-205ENST00000467789 TRPM3Q9HCF6 1732 aaPredicted RBP14.91□□□□□ -0.02
SSR3-205ENST00000467789 HAP1P54257 671 aaPredicted RBP14.9□□□□□ -0.02
SSR3-205ENST00000467789 NBPF1Q3BBV0 1214 aa14.9□□□□□ -0.02
SSR3-205ENST00000467789 RGS12O14924 1447 aa14.9□□□□□ -0.02
SSR3-205ENST00000467789 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
SSR3-205ENST00000467789 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
SSR3-205ENST00000467789 SLIT2O94813 1529 aa14.89□□□□□ -0.03
SSR3-205ENST00000467789 NGDNQ8NEJ9 315 aaKnown RBP14.89□□□□□ -0.03
SSR3-205ENST00000467789 NUDT16Q96DE0 195 aaKnown RBP14.89□□□□□ -0.03
SSR3-205ENST00000467789 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
SSR3-205ENST00000467789 CDK19Q9BWU1 502 aa14.88□□□□□ -0.03
SSR3-205ENST00000467789 NWD2Q9ULI1 1742 aa14.88□□□□□ -0.03
SSR3-205ENST00000467789 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
SSR3-205ENST00000467789 TRPM1Q7Z4N2 1603 aa14.88□□□□□ -0.03
SSR3-205ENST00000467789 TOPAZ1Q8N9V7 1692 aa14.87□□□□□ -0.03
SSR3-205ENST00000467789 UNC5CLQ8IV45 518 aa14.87□□□□□ -0.03
SSR3-205ENST00000467789 UPF1Q92900 1129 aaKnown RBP eCLIP14.87□□□□□ -0.036e-15■□□□□ 10.5
SSR3-205ENST00000467789 SIN3AQ96ST3 1273 aa14.87□□□□□ -0.03
SSR3-205ENST00000467789 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
SSR3-205ENST00000467789 GJD4Q96KN9 370 aaPredicted RBP14.86□□□□□ -0.03
SSR3-205ENST00000467789 POLR3AO14802 1390 aaPredicted RBP14.85□□□□□ -0.03
SSR3-205ENST00000467789 QRICH2Q9H0J4 1663 aa14.85□□□□□ -0.03
SSR3-205ENST00000467789 PLEKHG3A1L390 1219 aa14.85□□□□□ -0.03
SSR3-205ENST00000467789 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
SSR3-205ENST00000467789 NEUROD1Q13562 356 aa14.85□□□□□ -0.03
SSR3-205ENST00000467789 PLCH1Q4KWH8 1693 aa14.84□□□□□ -0.03
SSR3-205ENST00000467789 CABLES1Q8TDN4 633 aa14.84□□□□□ -0.03
SSR3-205ENST00000467789 ATAD2Q6PL18 1390 aa14.84□□□□□ -0.03
SSR3-205ENST00000467789 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
SSR3-205ENST00000467789 ROCK2O75116 1388 aaKnown RBP14.83□□□□□ -0.04
SSR3-205ENST00000467789 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
SSR3-205ENST00000467789 SRPK2P78362 688 aaKnown RBP14.82□□□□□ -0.04
SSR3-205ENST00000467789 CRYBG1Q9Y4K1 1723 aa14.82□□□□□ -0.04
SSR3-205ENST00000467789 COL14A1Q05707 1796 aaKnown RBP14.82□□□□□ -0.04
SSR3-205ENST00000467789 VPS72Q15906 364 aa14.81□□□□□ -0.04
SSR3-205ENST00000467789 NBPF8Q3BBV2 869 aa14.81□□□□□ -0.04
SSR3-205ENST00000467789 ACEP12821 1306 aa14.81□□□□□ -0.04
SSR3-205ENST00000467789 RALGAPBQ86X10 1494 aa14.81□□□□□ -0.04
SSR3-205ENST00000467789 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
SSR3-205ENST00000467789 EVC2Q86UK5 1308 aa14.8□□□□□ -0.04
SSR3-205ENST00000467789 GLI3P10071 1580 aa14.8□□□□□ -0.04
SSR3-205ENST00000467789 FAM83GA6ND36 823 aa14.79□□□□□ -0.04
SSR3-205ENST00000467789 PPIP5K1Q6PFW1 1433 aa14.79□□□□□ -0.04
SSR3-205ENST00000467789 TONSLQ96HA7 1378 aa14.78□□□□□ -0.04
SSR3-205ENST00000467789 CCDC125Q86Z20 511 aa14.78□□□□□ -0.04
SSR3-205ENST00000467789 PHRF1Q9P1Y6 1649 aaKnown RBP14.77□□□□□ -0.04
SSR3-205ENST00000467789 SBNO2Q9Y2G9 1366 aa14.77□□□□□ -0.04
SSR3-205ENST00000467789 ONECUT3O60422 494 aaPredicted RBP14.77□□□□□ -0.05
SSR3-205ENST00000467789 PLEKHG5O94827 1062 aa14.77□□□□□ -0.05
SSR3-205ENST00000467789 NRAPQ86VF7 1730 aa14.77□□□□□ -0.05
SSR3-205ENST00000467789 CABP2Q9NPB3 220 aa14.76□□□□□ -0.05
SSR3-205ENST00000467789 BTG4Q9NY30 223 aa14.76□□□□□ -0.05
SSR3-205ENST00000467789 ABTB2Q8N961 1025 aa14.75□□□□□ -0.05
SSR3-205ENST00000467789 PRDM11Q9NQV5 511 aa14.75□□□□□ -0.05
SSR3-205ENST00000467789 CCDC9Q9Y3X0 531 aaKnown RBP14.75□□□□□ -0.05
SSR3-205ENST00000467789 EP400Q96L91 3159 aa14.75□□□□□ -0.05
SSR3-205ENST00000467789 NLRP13Q86W25 1043 aa14.74□□□□□ -0.05
SSR3-205ENST00000467789 USP6P35125 1406 aa14.74□□□□□ -0.05
SSR3-205ENST00000467789 USP19O94966 1318 aa14.73□□□□□ -0.05
SSR3-205ENST00000467789 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
SSR3-205ENST00000467789 CARD11Q9BXL7 1154 aa14.73□□□□□ -0.05
SSR3-205ENST00000467789 CABP1Q9NZU7 370 aa14.73□□□□□ -0.05
SSR3-205ENST00000467789 CPDO75976 1380 aa14.73□□□□□ -0.05
SSR3-205ENST00000467789 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
SSR3-205ENST00000467789 BRWD3Q6RI45 1802 aa14.72□□□□□ -0.05
SSR3-205ENST00000467789 SEPT12Q8IYM1 358 aa14.72□□□□□ -0.05
SSR3-205ENST00000467789 NRKQ7Z2Y5 1582 aa14.71□□□□□ -0.05
SSR3-205ENST00000467789 SPATA31A5Q5VU36 1347 aa14.7□□□□□ -0.06
SSR3-205ENST00000467789 SPATA31A7Q8IWB4 1347 aa14.7□□□□□ -0.06
SSR3-205ENST00000467789 SLC24A1O60721 1099 aa14.7□□□□□ -0.06
SSR3-205ENST00000467789 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
SSR3-205ENST00000467789 SSH2Q76I76 1423 aa14.69□□□□□ -0.06
SSR3-205ENST00000467789 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
SSR3-205ENST00000467789 KRT27Q7Z3Y8 459 aa14.69□□□□□ -0.06
SSR3-205ENST00000467789 AKAP12Q02952 1782 aa14.69□□□□□ -0.06
SSR3-205ENST00000467789 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
SSR3-205ENST00000467789 GCP02774 474 aa14.68□□□□□ -0.06
SSR3-205ENST00000467789 ZC3H6P61129 1189 aaKnown RBP14.68□□□□□ -0.06
SSR3-205ENST00000467789 PUS7Q96PZ0 661 aaKnown RBP14.68□□□□□ -0.06
SSR3-205ENST00000467789 TTC21AQ8NDW8 1320 aa14.67□□□□□ -0.06
SSR3-205ENST00000467789 NLRP6P59044 892 aa14.67□□□□□ -0.06
SSR3-205ENST00000467789 FAM98CQ17RN3 349 aaKnown RBP14.67□□□□□ -0.06
SSR3-205ENST00000467789 LMO7Q8WWI1 1683 aa14.67□□□□□ -0.06
SSR3-205ENST00000467789 SPATA31A1Q5TZJ5 1347 aa14.66□□□□□ -0.06
SSR3-205ENST00000467789 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
SSR3-205ENST00000467789 SLIT3O75094 1523 aa14.66□□□□□ -0.06
SSR3-205ENST00000467789 THSD7AQ9UPZ6 1657 aa14.66□□□□□ -0.06
SSR3-205ENST00000467789 A0A0G2JS52 829 aa14.66□□□□□ -0.06
SSR3-205ENST00000467789 MYT1Q01538 1121 aa14.66□□□□□ -0.06
SSR3-205ENST00000467789 CHRNA2Q15822 529 aa14.66□□□□□ -0.06
SSR3-205ENST00000467789 CLSPNQ9HAW4 1339 aa14.66□□□□□ -0.06
SSR3-205ENST00000467789 PIK3C2AO00443 1686 aa14.65□□□□□ -0.06
SSR3-205ENST00000467789 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
SSR3-205ENST00000467789 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
SSR3-205ENST00000467789 EVA1CP58658 441 aa14.65□□□□□ -0.06
SSR3-205ENST00000467789 SF3B2Q13435 895 aaKnown RBP14.65□□□□□ -0.06
SSR3-205ENST00000467789 SPDYE2Q495Y8 402 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms