RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 PRR12Q9ULL5 1215 aa9.71□□□□□ -0.85
SPTBN1-204ENST00000467371 MSL3Q8N5Y2 521 aaKnown RBP9.71□□□□□ -0.86
SPTBN1-204ENST00000467371 FEZ2Q9UHY8 353 aaPredicted RBP9.71□□□□□ -0.86
SPTBN1-204ENST00000467371 TPX2Q9ULW0 747 aaKnown RBP9.71□□□□□ -0.86
SPTBN1-204ENST00000467371 RPS6KC1Q96S38 1066 aa9.71□□□□□ -0.86
SPTBN1-204ENST00000467371 CUX2O14529 1486 aa9.7□□□□□ -0.86
SPTBN1-204ENST00000467371 HOXA2O43364 376 aa9.7□□□□□ -0.86
SPTBN1-204ENST00000467371 FAM43AQ8N2R8 423 aa9.7□□□□□ -0.86
SPTBN1-204ENST00000467371 CCDC102AQ96A19 550 aa9.7□□□□□ -0.86
SPTBN1-204ENST00000467371 MS4A1P11836 297 aa9.7□□□□□ -0.86
SPTBN1-204ENST00000467371 ZBTB47Q9UFB7 747 aaPredicted RBP9.7□□□□□ -0.86
SPTBN1-204ENST00000467371 PUS10Q3MIT2 529 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-204ENST00000467371 STAG1Q8WVM7 1258 aa9.69□□□□□ -0.86
SPTBN1-204ENST00000467371 TRIM52Q96A61 297 aa9.69□□□□□ -0.86
SPTBN1-204ENST00000467371 MAP3K20Q9NYL2 800 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-204ENST00000467371 WWC3Q9ULE0 1092 aa9.69□□□□□ -0.86
SPTBN1-204ENST00000467371 NCAPD3P42695 1498 aa9.69□□□□□ -0.86
SPTBN1-204ENST00000467371 VPS8Q8N3P4 1428 aa9.69□□□□□ -0.86
SPTBN1-204ENST00000467371 ANP32AP39687 249 aaKnown RBP9.68□□□□□ -0.86
SPTBN1-204ENST00000467371 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
SPTBN1-204ENST00000467371 BIRC2Q13490 618 aa9.68□□□□□ -0.86
SPTBN1-204ENST00000467371 HDAC1Q13547 482 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-204ENST00000467371 CARD10Q9BWT7 1032 aa9.68□□□□□ -0.86
SPTBN1-204ENST00000467371 INO80BQ9C086 356 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-204ENST00000467371 CEP126Q9P2H0 1117 aa9.68□□□□□ -0.86
SPTBN1-204ENST00000467371 NBPF9Q3BBW0 867 aa9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 ICE2Q659A1 982 aa9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 CCAR1Q8IX12 1150 aaKnown RBP9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 ATL2Q8NHH9 583 aa9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 SNRNP27Q8WVK2 155 aaKnown RBP9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 SNRKQ9NRH2 765 aa9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 MINK1Q8N4C8 1332 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 CREBRFQ8IUR6 639 aa9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 SLC39A13Q96H72 371 aa9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 ZNF512BQ96KM6 892 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 SIN3AQ96ST3 1273 aa9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 PDZRN3Q9UPQ7 1066 aa9.67□□□□□ -0.86
SPTBN1-204ENST00000467371 POU5F1Q01860 360 aaKnown RBP9.66□□□□□ -0.86
SPTBN1-204ENST00000467371 TRIM44Q96DX7 344 aaPredicted RBP9.66□□□□□ -0.86
SPTBN1-204ENST00000467371 ATG7O95352 703 aa9.66□□□□□ -0.86
SPTBN1-204ENST00000467371 RFX1P22670 979 aa9.66□□□□□ -0.86
SPTBN1-204ENST00000467371 EPAS1Q99814 870 aa9.66□□□□□ -0.86
SPTBN1-204ENST00000467371 ERCC5P28715 1186 aaPredicted RBP9.65□□□□□ -0.86
SPTBN1-204ENST00000467371 PIK3R5Q8WYR1 880 aa9.65□□□□□ -0.86
SPTBN1-204ENST00000467371 DCAF8L1A6NGE4 600 aa9.65□□□□□ -0.86
SPTBN1-204ENST00000467371 GSE1Q14687 1217 aa9.65□□□□□ -0.86
SPTBN1-204ENST00000467371 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
SPTBN1-204ENST00000467371 IRF6O14896 467 aa9.64□□□□□ -0.87
SPTBN1-204ENST00000467371 IBSPP21815 317 aaPredicted RBP9.64□□□□□ -0.87
SPTBN1-204ENST00000467371 SPC25Q9HBM1 224 aa9.64□□□□□ -0.87
SPTBN1-204ENST00000467371 COL4A3BPQ9Y5P4 624 aa9.64□□□□□ -0.87
SPTBN1-204ENST00000467371 MARSP56192 900 aaKnown RBP9.64□□□□□ -0.87
SPTBN1-204ENST00000467371 CHIC2Q9UKJ5 165 aa9.64□□□□□ -0.87
SPTBN1-204ENST00000467371 SCINQ9Y6U3 715 aa9.64□□□□□ -0.87
SPTBN1-204ENST00000467371 DHX38Q92620 1227 aaKnown RBP9.63□□□□□ -0.87
SPTBN1-204ENST00000467371 IL17RAQ96F46 866 aa9.63□□□□□ -0.87
SPTBN1-204ENST00000467371 FAM200BP0CF97 657 aa9.63□□□□□ -0.87
SPTBN1-204ENST00000467371 ANKRD23Q86SG2 305 aa9.63□□□□□ -0.87
SPTBN1-204ENST00000467371 ADAMTS19Q8TE59 1207 aa9.63□□□□□ -0.87
SPTBN1-204ENST00000467371 PCDH12Q9NPG4 1184 aa9.63□□□□□ -0.87
SPTBN1-204ENST00000467371 TAGLNQ01995 201 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 RAD51AP2Q09MP3 1159 aa9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 C1orf131Q8NDD1 294 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 CEP63Q96MT8 703 aa9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 NT5DC4Q86YG4 428 aa9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 TANGO6Q9C0B7 1094 aa9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 G3BP2Q9UN86 482 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 RRP9O43818 475 aaKnown RBP9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 TINF2Q9BSI4 451 aa9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 KIF21BO75037 1637 aa9.62□□□□□ -0.87
SPTBN1-204ENST00000467371 DDX10Q13206 875 aaKnown RBP9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 VDRP11473 427 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 RASSF7Q02833 373 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 JAZF1Q86VZ6 243 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 FMNL3Q8IVF7 1028 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 ENOX1Q8TC92 643 aaKnown RBP9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 TMX4Q9H1E5 349 aaPredicted RBP9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 FGAP02671 866 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 MTA1Q13330 715 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 PHLDB3Q6NSJ2 640 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 FBXO33Q7Z6M2 555 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 ZCRB1Q8TBF4 217 aaKnown RBP9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 DDX27Q96GQ7 796 aaKnown RBP9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
SPTBN1-204ENST00000467371 ARAP1Q96P48 1450 aa9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 MAPKBP1O60336 1514 aa9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 VIL1P09327 827 aaKnown RBP9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 LMOD3Q0VAK6 560 aa9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 RGS20O76081 388 aa9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 HDLBPQ00341 1268 aaKnown RBP9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 BMS1Q14692 1282 aaKnown RBP9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 ZNF830Q96NB3 372 aaPredicted RBP9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 CUX1P39880 1505 aa9.6□□□□□ -0.87
SPTBN1-204ENST00000467371 EFCAB2Q5VUJ9 269 aa9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 PAGR1Q9BTK6 254 aa9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 WDR97A6NE52 1622 aa9.59□□□□□ -0.87
SPTBN1-204ENST00000467371 ZNF746Q6NUN9 644 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms