RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 NEUROD2Q15784 382 aa12.31□□□□□ -0.44
APTX-214ENST00000467331 POGKQ9P215 609 aa12.31□□□□□ -0.44
APTX-214ENST00000467331 PPIP5K1Q6PFW1 1433 aa12.31□□□□□ -0.44
APTX-214ENST00000467331 PNPLA6Q8IY17 1366 aa12.31□□□□□ -0.44
APTX-214ENST00000467331 U2AF1L5P0DN76 240 aaPredicted RBP12.31□□□□□ -0.44
APTX-214ENST00000467331 U2AF1Q01081 240 aaKnown RBP eCLIP12.31□□□□□ -0.442e-8■■■■■ 37
APTX-214ENST00000467331 FTSJ3Q8IY81 847 aaKnown RBP12.31□□□□□ -0.44
APTX-214ENST00000467331 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
APTX-214ENST00000467331 NEO1Q92859 1461 aa12.3□□□□□ -0.44
APTX-214ENST00000467331 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
APTX-214ENST00000467331 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
APTX-214ENST00000467331 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
APTX-214ENST00000467331 PTPRMP28827 1452 aa12.3□□□□□ -0.44
APTX-214ENST00000467331 TMPOP42166 694 aaKnown RBP12.29□□□□□ -0.44
APTX-214ENST00000467331 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 PNNQ9H307 717 aaKnown RBP12.29□□□□□ -0.44
APTX-214ENST00000467331 CHMP5Q9NZZ3 219 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 DIP2CQ9Y2E4 1556 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 FSD2A1L4K1 749 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 TRIM27P14373 513 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 TNNT2P45379 298 aaPredicted RBP12.29□□□□□ -0.44
APTX-214ENST00000467331 ATF7IPQ6VMQ6 1270 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 BCL2L13Q9BXK5 485 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 SLKQ9H2G2 1235 aaPredicted RBP12.29□□□□□ -0.44
APTX-214ENST00000467331 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 CD163L1Q9NR16 1453 aa12.29□□□□□ -0.44
APTX-214ENST00000467331 CFAP65Q6ZU64 1925 aaKnown RBP12.28□□□□□ -0.44
APTX-214ENST00000467331 CHGAP10645 457 aaKnown RBP12.28□□□□□ -0.44
APTX-214ENST00000467331 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
APTX-214ENST00000467331 TMEM132EQ6IEE7 984 aa12.28□□□□□ -0.44
APTX-214ENST00000467331 C22orf23Q9BZE7 217 aa12.28□□□□□ -0.44
APTX-214ENST00000467331 ISY1Q9ULR0 285 aaKnown RBP12.28□□□□□ -0.44
APTX-214ENST00000467331 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
APTX-214ENST00000467331 MCM4P33991 863 aa12.28□□□□□ -0.44
APTX-214ENST00000467331 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
APTX-214ENST00000467331 IPO8O15397 1037 aaKnown RBP12.27□□□□□ -0.45
APTX-214ENST00000467331 RBM25P49756 843 aaKnown RBP12.27□□□□□ -0.45
APTX-214ENST00000467331 SNX21Q969T3 373 aa12.27□□□□□ -0.45
APTX-214ENST00000467331 TMEM131LA2VDJ0 1609 aa12.27□□□□□ -0.45
APTX-214ENST00000467331 EXOSC9Q06265 439 aaKnown RBP12.26□□□□□ -0.45
APTX-214ENST00000467331 SSH1Q8WYL5 1049 aa12.26□□□□□ -0.45
APTX-214ENST00000467331 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
APTX-214ENST00000467331 PIK3R4Q99570 1358 aa12.26□□□□□ -0.45
APTX-214ENST00000467331 KCNA4P22459 653 aa12.26□□□□□ -0.45
APTX-214ENST00000467331 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
APTX-214ENST00000467331 PREX1Q8TCU6 1659 aa12.25□□□□□ -0.45
APTX-214ENST00000467331 DDIT3P35638 169 aa12.25□□□□□ -0.45
APTX-214ENST00000467331 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
APTX-214ENST00000467331 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
APTX-214ENST00000467331 SLC52A1Q9NWF4 448 aa12.25□□□□□ -0.45
APTX-214ENST00000467331 TERF2IPQ9NYB0 399 aa12.25□□□□□ -0.45
APTX-214ENST00000467331 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
APTX-214ENST00000467331 DLC1Q96QB1 1528 aa12.25□□□□□ -0.45
APTX-214ENST00000467331 DDX11L8A8MPP1 907 aa12.24□□□□□ -0.45
APTX-214ENST00000467331 NUCB1Q02818 461 aa12.24□□□□□ -0.45
APTX-214ENST00000467331 FAM135BQ49AJ0 1406 aa12.24□□□□□ -0.45
APTX-214ENST00000467331 TSR2Q969E8 191 aaKnown RBP12.24□□□□□ -0.45
APTX-214ENST00000467331 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
APTX-214ENST00000467331 MYO5BQ9ULV0 1848 aa12.24□□□□□ -0.45
APTX-214ENST00000467331 RICTORQ6R327 1708 aa12.24□□□□□ -0.45
APTX-214ENST00000467331 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
APTX-214ENST00000467331 ARHGEF40Q8TER5 1519 aa12.23□□□□□ -0.45
APTX-214ENST00000467331 GOLGA6L3A6NEY3 463 aa12.23□□□□□ -0.45
APTX-214ENST00000467331 ITPRIPQ8IWB1 547 aa12.23□□□□□ -0.45
APTX-214ENST00000467331 HSCBQ8IWL3 235 aa12.23□□□□□ -0.45
APTX-214ENST00000467331 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
APTX-214ENST00000467331 ATP7BP35670 1465 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 FYB1O15117 783 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 FCHSD2O94868 740 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 GGT6Q6P531 493 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 ARHGAP45Q92619 1136 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
APTX-214ENST00000467331 YTHDC2Q9H6S0 1430 aaKnown RBP12.22□□□□□ -0.45
APTX-214ENST00000467331 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
APTX-214ENST00000467331 PTMSP20962 102 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 BMP2KLQ5H9B9 411 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
APTX-214ENST00000467331 DIAPH1O60610 1272 aaKnown RBP12.21□□□□□ -0.45
APTX-214ENST00000467331 MFAP1P55081 439 aaKnown RBP12.21□□□□□ -0.45
APTX-214ENST00000467331 EIF5BO60841 1220 aaKnown RBP12.2□□□□□ -0.46
APTX-214ENST00000467331 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
APTX-214ENST00000467331 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
APTX-214ENST00000467331 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
APTX-214ENST00000467331 MRE11P49959 708 aa12.2□□□□□ -0.46
APTX-214ENST00000467331 RIPK4P57078 832 aa12.2□□□□□ -0.46
APTX-214ENST00000467331 GCC1Q96CN9 775 aa12.2□□□□□ -0.46
APTX-214ENST00000467331 ALKQ9UM73 1620 aa12.2□□□□□ -0.46
APTX-214ENST00000467331 KIF24Q5T7B8 1368 aa12.2□□□□□ -0.46
APTX-214ENST00000467331 TRAK2O60296 914 aa12.19□□□□□ -0.46
APTX-214ENST00000467331 CALD1Q05682 793 aaKnown RBP12.19□□□□□ -0.46
APTX-214ENST00000467331 CHD1LQ86WJ1 897 aa12.19□□□□□ -0.46
APTX-214ENST00000467331 GGNBP2Q9H3C7 697 aa12.19□□□□□ -0.46
APTX-214ENST00000467331 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
APTX-214ENST00000467331 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
APTX-214ENST00000467331 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
APTX-214ENST00000467331 IDI1Q13907 227 aa12.18□□□□□ -0.46
APTX-214ENST00000467331 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
APTX-214ENST00000467331 RRAGDQ9NQL2 400 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms