RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SPATA31A6Q5VVP1 1343 aa13.7□□□□□ -0.22
PMF1-204ENST00000466489 CCER2I3L3R5 266 aa13.7□□□□□ -0.22
PMF1-204ENST00000466489 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
PMF1-204ENST00000466489 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
PMF1-204ENST00000466489 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
PMF1-204ENST00000466489 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
PMF1-204ENST00000466489 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
PMF1-204ENST00000466489 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
PMF1-204ENST00000466489 USP6P35125 1406 aa13.68□□□□□ -0.22
PMF1-204ENST00000466489 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
PMF1-204ENST00000466489 ALS2Q96Q42 1657 aa13.67□□□□□ -0.22
PMF1-204ENST00000466489 YTHDC1Q96MU7 727 aaKnown RBP13.67□□□□□ -0.22
PMF1-204ENST00000466489 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
PMF1-204ENST00000466489 MYOM1P52179 1685 aa13.66□□□□□ -0.22
PMF1-204ENST00000466489 SLC12A5Q9H2X9 1139 aa13.66□□□□□ -0.22
PMF1-204ENST00000466489 ANKRD36BQ8N2N9 1353 aa13.66□□□□□ -0.22
PMF1-204ENST00000466489 TTC21AQ8NDW8 1320 aa13.65□□□□□ -0.22
PMF1-204ENST00000466489 CPSF1Q10570 1443 aaKnown RBP13.65□□□□□ -0.22
PMF1-204ENST00000466489 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
PMF1-204ENST00000466489 ABTB2Q8N961 1025 aa13.65□□□□□ -0.22
PMF1-204ENST00000466489 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
PMF1-204ENST00000466489 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
PMF1-204ENST00000466489 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
PMF1-204ENST00000466489 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
PMF1-204ENST00000466489 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
PMF1-204ENST00000466489 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
PMF1-204ENST00000466489 MARF1Q9Y4F3 1742 aaKnown RBP13.63□□□□□ -0.23
PMF1-204ENST00000466489 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
PMF1-204ENST00000466489 ABCA3Q99758 1704 aa13.62□□□□□ -0.23
PMF1-204ENST00000466489 ANP32CO43423 234 aa13.62□□□□□ -0.23
PMF1-204ENST00000466489 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
PMF1-204ENST00000466489 TTC21BQ7Z4L5 1316 aa13.62□□□□□ -0.23
PMF1-204ENST00000466489 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
PMF1-204ENST00000466489 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
PMF1-204ENST00000466489 KIF7Q2M1P5 1343 aa13.61□□□□□ -0.23
PMF1-204ENST00000466489 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
PMF1-204ENST00000466489 KIF20BQ96Q89 1820 aa13.6□□□□□ -0.23
PMF1-204ENST00000466489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
PMF1-204ENST00000466489 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
PMF1-204ENST00000466489 SSH2Q76I76 1423 aa13.59□□□□□ -0.23
PMF1-204ENST00000466489 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
PMF1-204ENST00000466489 NEFLP07196 543 aa13.59□□□□□ -0.23
PMF1-204ENST00000466489 NLRP6P59044 892 aa13.59□□□□□ -0.23
PMF1-204ENST00000466489 PHRF1Q9P1Y6 1649 aaKnown RBP13.59□□□□□ -0.23
PMF1-204ENST00000466489 CRYBG1Q9Y4K1 1723 aa13.58□□□□□ -0.24
PMF1-204ENST00000466489 USP54Q70EL1 1684 aa13.57□□□□□ -0.24
PMF1-204ENST00000466489 ADAMTS2O95450 1211 aa13.57□□□□□ -0.24
PMF1-204ENST00000466489 NUTM2GQ5VZR2 741 aa13.57□□□□□ -0.24
PMF1-204ENST00000466489 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
PMF1-204ENST00000466489 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
PMF1-204ENST00000466489 LRP6O75581 1613 aa13.57□□□□□ -0.24
PMF1-204ENST00000466489 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
PMF1-204ENST00000466489 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
PMF1-204ENST00000466489 C11orf95C9JLR9 678 aaPredicted RBP13.55□□□□□ -0.24
PMF1-204ENST00000466489 CABLES1Q8TDN4 633 aa13.55□□□□□ -0.24
PMF1-204ENST00000466489 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
PMF1-204ENST00000466489 COG3Q96JB2 828 aa13.55□□□□□ -0.24
PMF1-204ENST00000466489 C8orf37Q96NL8 207 aa13.55□□□□□ -0.24
PMF1-204ENST00000466489 PANK3Q9H999 370 aa13.55□□□□□ -0.24
PMF1-204ENST00000466489 KNSTRNQ9Y448 316 aa13.55□□□□□ -0.24
PMF1-204ENST00000466489 USP19O94966 1318 aa13.55□□□□□ -0.24
PMF1-204ENST00000466489 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
PMF1-204ENST00000466489 COL14A1Q05707 1796 aaKnown RBP13.55□□□□□ -0.24
PMF1-204ENST00000466489 NME9Q86XW9 330 aa13.54□□□□□ -0.24
PMF1-204ENST00000466489 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
PMF1-204ENST00000466489 USP31Q70CQ4 1352 aa13.54□□□□□ -0.24
PMF1-204ENST00000466489 SLIT3O75094 1523 aa13.54□□□□□ -0.24
PMF1-204ENST00000466489 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
PMF1-204ENST00000466489 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
PMF1-204ENST00000466489 ZNF772Q68DY9 489 aaPredicted RBP13.53□□□□□ -0.24
PMF1-204ENST00000466489 NSD2O96028 1365 aa13.53□□□□□ -0.24
PMF1-204ENST00000466489 GCP02774 474 aa13.52□□□□□ -0.25
PMF1-204ENST00000466489 PLCH1Q4KWH8 1693 aa13.52□□□□□ -0.25
PMF1-204ENST00000466489 LTN1O94822 1766 aa13.51□□□□□ -0.25
PMF1-204ENST00000466489 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
PMF1-204ENST00000466489 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
PMF1-204ENST00000466489 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.5□□□□□ -0.25
PMF1-204ENST00000466489 CPDO75976 1380 aa13.5□□□□□ -0.25
PMF1-204ENST00000466489 KIAA0232Q92628 1395 aa13.5□□□□□ -0.25
PMF1-204ENST00000466489 AFF2P51816 1311 aa13.5□□□□□ -0.25
PMF1-204ENST00000466489 ZBTB7CA1YPR0 619 aa13.5□□□□□ -0.25
PMF1-204ENST00000466489 SOX12O15370 315 aa13.5□□□□□ -0.25
PMF1-204ENST00000466489 ZC3H6P61129 1189 aaKnown RBP13.5□□□□□ -0.25
PMF1-204ENST00000466489 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
PMF1-204ENST00000466489 FYB1O15117 783 aa13.49□□□□□ -0.25
PMF1-204ENST00000466489 USP21Q9UK80 565 aa13.49□□□□□ -0.25
PMF1-204ENST00000466489 ABCC6O95255 1503 aa13.49□□□□□ -0.25
PMF1-204ENST00000466489 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
PMF1-204ENST00000466489 NFAT5O94916 1531 aa13.48□□□□□ -0.25
PMF1-204ENST00000466489 FNBP4Q8N3X1 1017 aaPredicted RBP13.47□□□□□ -0.25
PMF1-204ENST00000466489 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
PMF1-204ENST00000466489 SLIT2O94813 1529 aa13.47□□□□□ -0.25
PMF1-204ENST00000466489 EVA1CP58658 441 aa13.46□□□□□ -0.25
PMF1-204ENST00000466489 UNC5CLQ8IV45 518 aa13.46□□□□□ -0.25
PMF1-204ENST00000466489 BTG4Q9NY30 223 aa13.46□□□□□ -0.25
PMF1-204ENST00000466489 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
PMF1-204ENST00000466489 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.25
PMF1-204ENST00000466489 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
PMF1-204ENST00000466489 FAM83GA6ND36 823 aa13.45□□□□□ -0.26
PMF1-204ENST00000466489 CHRNA2Q15822 529 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms