RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SBNO1A3KN83 1393 aa14.48□□□□□ -0.09
RTF1-202ENST00000462276 CC2D1BQ5T0F9 858 aaKnown RBP14.48□□□□□ -0.09
RTF1-202ENST00000462276 MORC1Q86VD1 984 aa14.48□□□□□ -0.09
RTF1-202ENST00000462276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.48□□□□□ -0.09
RTF1-202ENST00000462276 TOPAZ1Q8N9V7 1692 aa14.48□□□□□ -0.09
RTF1-202ENST00000462276 PARD3Q8TEW0 1356 aa14.47□□□□□ -0.09
RTF1-202ENST00000462276 SCAF1Q9H7N4 1312 aaKnown RBP14.47□□□□□ -0.09
RTF1-202ENST00000462276 ITSN1Q15811 1721 aa14.47□□□□□ -0.09
RTF1-202ENST00000462276 UBAP1LF5GYI3 381 aa14.47□□□□□ -0.09
RTF1-202ENST00000462276 COG3Q96JB2 828 aa14.47□□□□□ -0.09
RTF1-202ENST00000462276 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
RTF1-202ENST00000462276 SOS2Q07890 1332 aaPredicted RBP14.46□□□□□ -0.09
RTF1-202ENST00000462276 CCER2I3L3R5 266 aa14.46□□□□□ -0.09
RTF1-202ENST00000462276 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
RTF1-202ENST00000462276 NLRP13Q86W25 1043 aa14.46□□□□□ -0.09
RTF1-202ENST00000462276 ABTB2Q8N961 1025 aa14.46□□□□□ -0.09
RTF1-202ENST00000462276 KIF1AQ12756 1690 aa14.46□□□□□ -0.1
RTF1-202ENST00000462276 GGNBP2Q9H3C7 697 aa14.45□□□□□ -0.1
RTF1-202ENST00000462276 XIRP1Q702N8 1843 aaKnown RBP14.45□□□□□ -0.1
RTF1-202ENST00000462276 MYBBP1AQ9BQG0 1328 aaKnown RBP14.44□□□□□ -0.1
RTF1-202ENST00000462276 NLRP6P59044 892 aa14.44□□□□□ -0.1
RTF1-202ENST00000462276 NME9Q86XW9 330 aa14.44□□□□□ -0.1
RTF1-202ENST00000462276 MIER1Q8N108 512 aa14.44□□□□□ -0.1
RTF1-202ENST00000462276 ARHGEF10O15013 1369 aa14.43□□□□□ -0.1
RTF1-202ENST00000462276 SPATA31A3Q5VYP0 1347 aa14.42□□□□□ -0.1
RTF1-202ENST00000462276 KCNH5Q8NCM2 988 aa14.42□□□□□ -0.1
RTF1-202ENST00000462276 LRRC59Q96AG4 307 aaKnown RBP14.42□□□□□ -0.1
RTF1-202ENST00000462276 AATKQ6ZMQ8 1374 aa14.41□□□□□ -0.1
RTF1-202ENST00000462276 PPP2R1AP30153 589 aa14.4□□□□□ -0.1
RTF1-202ENST00000462276 XPCQ01831 940 aaPredicted RBP14.4□□□□□ -0.1
RTF1-202ENST00000462276 PXDNQ92626 1479 aa14.39□□□□□ -0.11
RTF1-202ENST00000462276 OVOS2A0A0J9YW53 1432 aa14.39□□□□□ -0.11
RTF1-202ENST00000462276 TNS3Q68CZ2 1445 aa14.39□□□□□ -0.11
RTF1-202ENST00000462276 OVOS2Q6IE36 1432 aa14.39□□□□□ -0.11
RTF1-202ENST00000462276 MON2Q7Z3U7 1717 aa14.38□□□□□ -0.11
RTF1-202ENST00000462276 AKAP12Q02952 1782 aa14.38□□□□□ -0.11
RTF1-202ENST00000462276 PIP4K2BP78356 416 aa14.38□□□□□ -0.11
RTF1-202ENST00000462276 CNGB1Q14028 1251 aaPredicted RBP14.38□□□□□ -0.11
RTF1-202ENST00000462276 LMOD2Q6P5Q4 547 aa14.38□□□□□ -0.11
RTF1-202ENST00000462276 DDX17Q92841 729 aaKnown RBP14.38□□□□□ -0.11
RTF1-202ENST00000462276 CFAP53Q96M91 514 aa14.37□□□□□ -0.11
RTF1-202ENST00000462276 USP19O94966 1318 aa14.37□□□□□ -0.11
RTF1-202ENST00000462276 KIF24Q5T7B8 1368 aa14.36□□□□□ -0.11
RTF1-202ENST00000462276 HSPA1LP34931 641 aa14.36□□□□□ -0.11
RTF1-202ENST00000462276 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
RTF1-202ENST00000462276 RGPD8O14715 1765 aaPredicted RBP14.36□□□□□ -0.11
RTF1-202ENST00000462276 GCP02774 474 aa14.35□□□□□ -0.11
RTF1-202ENST00000462276 TNNT2P45379 298 aaPredicted RBP14.35□□□□□ -0.11
RTF1-202ENST00000462276 MTHFSP49914 203 aa14.35□□□□□ -0.11
RTF1-202ENST00000462276 POLKQ9UBT6 870 aa14.35□□□□□ -0.11
RTF1-202ENST00000462276 NRKQ7Z2Y5 1582 aa14.34□□□□□ -0.11
RTF1-202ENST00000462276 AHDC1Q5TGY3 1603 aaPredicted RBP14.34□□□□□ -0.11
RTF1-202ENST00000462276 NUTM2GQ5VZR2 741 aa14.34□□□□□ -0.11
RTF1-202ENST00000462276 MRS2Q9HD23 443 aa14.34□□□□□ -0.11
RTF1-202ENST00000462276 INSRP06213 1382 aa14.34□□□□□ -0.11
RTF1-202ENST00000462276 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
RTF1-202ENST00000462276 MED1Q15648 1581 aaPredicted RBP14.31□□□□□ -0.12
RTF1-202ENST00000462276 ARHGEF25Q86VW2 580 aa14.31□□□□□ -0.12
RTF1-202ENST00000462276 NUDCQ9Y266 331 aa14.31□□□□□ -0.12
RTF1-202ENST00000462276 ROBO1Q9Y6N7 1651 aa14.3□□□□□ -0.12
RTF1-202ENST00000462276 AMPHP49418 695 aa14.3□□□□□ -0.12
RTF1-202ENST00000462276 MAP3K19Q56UN5 1328 aa14.3□□□□□ -0.12
RTF1-202ENST00000462276 SMG6Q86US8 1419 aaKnown RBP14.3□□□□□ -0.12
RTF1-202ENST00000462276 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
RTF1-202ENST00000462276 TRPM3Q9HCF6 1732 aaPredicted RBP14.29□□□□□ -0.12
RTF1-202ENST00000462276 HAP1P54257 671 aaPredicted RBP14.29□□□□□ -0.12
RTF1-202ENST00000462276 PNISRQ8TF01 805 aaKnown RBP14.29□□□□□ -0.12
RTF1-202ENST00000462276 IP6K1Q92551 441 aa14.29□□□□□ -0.12
RTF1-202ENST00000462276 RTL1A6NKG5 1358 aa14.29□□□□□ -0.12
RTF1-202ENST00000462276 CPDO75976 1380 aa14.29□□□□□ -0.12
RTF1-202ENST00000462276 PIK3C2AO00443 1686 aa14.28□□□□□ -0.12
RTF1-202ENST00000462276 PPM1GO15355 546 aaPredicted RBP14.28□□□□□ -0.12
RTF1-202ENST00000462276 FLT4P35916 1363 aa14.28□□□□□ -0.12
RTF1-202ENST00000462276 RRS1Q15050 365 aaKnown RBP14.28□□□□□ -0.12
RTF1-202ENST00000462276 JCADQ9P266 1359 aa14.28□□□□□ -0.12
RTF1-202ENST00000462276 SLIT3O75094 1523 aa14.27□□□□□ -0.12
RTF1-202ENST00000462276 SOX12O15370 315 aa14.27□□□□□ -0.13
RTF1-202ENST00000462276 DIAPH1O60610 1272 aaKnown RBP14.27□□□□□ -0.13
RTF1-202ENST00000462276 EMILIN1Q9Y6C2 1016 aa14.27□□□□□ -0.13
RTF1-202ENST00000462276 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
RTF1-202ENST00000462276 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
RTF1-202ENST00000462276 KIF20BQ96Q89 1820 aa14.26□□□□□ -0.13
RTF1-202ENST00000462276 ALS2Q96Q42 1657 aa14.26□□□□□ -0.13
RTF1-202ENST00000462276 CDK12Q9NYV4 1490 aaPredicted RBP14.25□□□□□ -0.13
RTF1-202ENST00000462276 SPATA31A6Q5VVP1 1343 aa14.25□□□□□ -0.13
RTF1-202ENST00000462276 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
RTF1-202ENST00000462276 FBLN1P23142 703 aa14.25□□□□□ -0.13
RTF1-202ENST00000462276 HOXC9P31274 260 aa14.25□□□□□ -0.13
RTF1-202ENST00000462276 CCDC184Q52MB2 194 aa14.25□□□□□ -0.13
RTF1-202ENST00000462276 CABLES1Q8TDN4 633 aa14.25□□□□□ -0.13
RTF1-202ENST00000462276 PNNQ9H307 717 aaKnown RBP14.25□□□□□ -0.13
RTF1-202ENST00000462276 ZC3H6P61129 1189 aaKnown RBP14.24□□□□□ -0.13
RTF1-202ENST00000462276 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
RTF1-202ENST00000462276 NFAT5O94916 1531 aa14.24□□□□□ -0.13
RTF1-202ENST00000462276 IL13P35225 146 aa14.23□□□□□ -0.13
RTF1-202ENST00000462276 HSP90AB2PQ58FF8 381 aa14.23□□□□□ -0.13
RTF1-202ENST00000462276 BLMP54132 1417 aaPredicted RBP14.23□□□□□ -0.13
RTF1-202ENST00000462276 COL16A1Q07092 1604 aaPredicted RBP14.22□□□□□ -0.13
RTF1-202ENST00000462276 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
RTF1-202ENST00000462276 FCHSD2O94868 740 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms