RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 VPS72Q15906 364 aa14.13□□□□□ -0.15
NECTIN3-202ENST00000461477 RRBP1Q9P2E9 1410 aaKnown RBP14.13□□□□□ -0.15
NECTIN3-202ENST00000461477 PRKAR2AP13861 404 aaKnown RBP14.12□□□□□ -0.15
NECTIN3-202ENST00000461477 KRT28Q7Z3Y7 464 aa14.12□□□□□ -0.15
NECTIN3-202ENST00000461477 CCDC144AA2RUR9 1427 aa14.12□□□□□ -0.15
NECTIN3-202ENST00000461477 TNS3Q68CZ2 1445 aa14.12□□□□□ -0.15
NECTIN3-202ENST00000461477 TNS1Q9HBL0 1735 aaKnown RBP14.12□□□□□ -0.15
NECTIN3-202ENST00000461477 SPATA31E1Q6ZUB1 1445 aa14.11□□□□□ -0.15
NECTIN3-202ENST00000461477 UTRNP46939 3433 aa14.11□□□□□ -0.15
NECTIN3-202ENST00000461477 ABCC11Q96J66 1382 aa14.1□□□□□ -0.15
NECTIN3-202ENST00000461477 FAM83GA6ND36 823 aa14.1□□□□□ -0.15
NECTIN3-202ENST00000461477 FAM182BQ5T319 152 aa14.1□□□□□ -0.15
NECTIN3-202ENST00000461477 KRT27Q7Z3Y8 459 aa14.1□□□□□ -0.15
NECTIN3-202ENST00000461477 TRPM3Q9HCF6 1732 aaPredicted RBP14.1□□□□□ -0.15
NECTIN3-202ENST00000461477 PIK3C2GO75747 1445 aa14.08□□□□□ -0.15
NECTIN3-202ENST00000461477 YTHDC2Q9H6S0 1430 aaKnown RBP14.08□□□□□ -0.15
NECTIN3-202ENST00000461477 NRXN1Q9ULB1 1477 aa14.08□□□□□ -0.16
NECTIN3-202ENST00000461477 RGPD1P0DJD0 1748 aa14.08□□□□□ -0.16
NECTIN3-202ENST00000461477 CRYBG1Q9Y4K1 1723 aa14.08□□□□□ -0.16
NECTIN3-202ENST00000461477 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
NECTIN3-202ENST00000461477 SF3B2Q13435 895 aaKnown RBP14.07□□□□□ -0.16
NECTIN3-202ENST00000461477 RGL3Q3MIN7 710 aa14.07□□□□□ -0.16
NECTIN3-202ENST00000461477 ALS2Q96Q42 1657 aa14.07□□□□□ -0.16
NECTIN3-202ENST00000461477 THSD7AQ9UPZ6 1657 aa14.07□□□□□ -0.16
NECTIN3-202ENST00000461477 FAM98CQ17RN3 349 aaKnown RBP14.06□□□□□ -0.16
NECTIN3-202ENST00000461477 PHF8Q9UPP1 1060 aa14.06□□□□□ -0.16
NECTIN3-202ENST00000461477 CCDC9Q9Y3X0 531 aaKnown RBP14.06□□□□□ -0.16
NECTIN3-202ENST00000461477 SBNO1A3KN83 1393 aa14.05□□□□□ -0.16
NECTIN3-202ENST00000461477 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
NECTIN3-202ENST00000461477 HAX1O00165 279 aa14.03□□□□□ -0.16
NECTIN3-202ENST00000461477 BAG6P46379 1132 aa14.03□□□□□ -0.16
NECTIN3-202ENST00000461477 COL14A1Q05707 1796 aaKnown RBP14.03□□□□□ -0.16
NECTIN3-202ENST00000461477 HAP1P54257 671 aaPredicted RBP14.02□□□□□ -0.17
NECTIN3-202ENST00000461477 LMOD2Q6P5Q4 547 aa14.02□□□□□ -0.17
NECTIN3-202ENST00000461477 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
NECTIN3-202ENST00000461477 BTG4Q9NY30 223 aa14.02□□□□□ -0.17
NECTIN3-202ENST00000461477 DISP2A7MBM2 1401 aa14.01□□□□□ -0.17
NECTIN3-202ENST00000461477 ANKRD30BQ9BXX2 1392 aa14.01□□□□□ -0.17
NECTIN3-202ENST00000461477 SAFB2Q14151 953 aaKnown RBP eCLIP14.01□□□□□ -0.17
NECTIN3-202ENST00000461477 EZH2Q15910 746 aaKnown RBP14.01□□□□□ -0.17
NECTIN3-202ENST00000461477 ARHGEF10O15013 1369 aa14□□□□□ -0.17
NECTIN3-202ENST00000461477 A0A0G2JS52 829 aa14□□□□□ -0.17
NECTIN3-202ENST00000461477 MYT1Q01538 1121 aa14□□□□□ -0.17
NECTIN3-202ENST00000461477 PSME1Q06323 249 aa14□□□□□ -0.17
NECTIN3-202ENST00000461477 RREB1Q92766 1687 aa14□□□□□ -0.17
NECTIN3-202ENST00000461477 NUP188Q5SRE5 1749 aa13.99□□□□□ -0.17
NECTIN3-202ENST00000461477 SPATA31A5Q5VU36 1347 aa13.99□□□□□ -0.17
NECTIN3-202ENST00000461477 SPATA31A7Q8IWB4 1347 aa13.99□□□□□ -0.17
NECTIN3-202ENST00000461477 CFAP70Q5T0N1 1121 aa13.99□□□□□ -0.17
NECTIN3-202ENST00000461477 SIRT1Q96EB6 747 aa13.99□□□□□ -0.17
NECTIN3-202ENST00000461477 ADGRB2O60241 1585 aa13.99□□□□□ -0.17
NECTIN3-202ENST00000461477 PRR36Q9H6K5 1346 aa13.98□□□□□ -0.17
NECTIN3-202ENST00000461477 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
NECTIN3-202ENST00000461477 PRAM1Q96QH2 718 aa13.98□□□□□ -0.17
NECTIN3-202ENST00000461477 CAMKK2Q96RR4 588 aa13.98□□□□□ -0.17
NECTIN3-202ENST00000461477 C14orf93Q9H972 538 aaKnown RBP13.98□□□□□ -0.17
NECTIN3-202ENST00000461477 ADGRB1O14514 1584 aa13.96□□□□□ -0.18
NECTIN3-202ENST00000461477 PHRF1Q9P1Y6 1649 aaKnown RBP13.95□□□□□ -0.18
NECTIN3-202ENST00000461477 ANKARQ7Z5J8 1434 aa13.95□□□□□ -0.18
NECTIN3-202ENST00000461477 DLC1Q96QB1 1528 aa13.95□□□□□ -0.18
NECTIN3-202ENST00000461477 TRIM37O94972 964 aa13.94□□□□□ -0.18
NECTIN3-202ENST00000461477 MPHOSPH9Q99550 1183 aa13.94□□□□□ -0.18
NECTIN3-202ENST00000461477 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
NECTIN3-202ENST00000461477 SPATA31A1Q5TZJ5 1347 aa13.92□□□□□ -0.18
NECTIN3-202ENST00000461477 ACIN1Q9UKV3 1341 aaKnown RBP13.92□□□□□ -0.18
NECTIN3-202ENST00000461477 CAMTA1Q9Y6Y1 1673 aa13.92□□□□□ -0.18
NECTIN3-202ENST00000461477 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
NECTIN3-202ENST00000461477 TULP4Q9NRJ4 1543 aa13.91□□□□□ -0.18
NECTIN3-202ENST00000461477 CHRNA2Q15822 529 aa13.91□□□□□ -0.18
NECTIN3-202ENST00000461477 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
NECTIN3-202ENST00000461477 GOLGB1Q14789 3259 aaKnown RBP13.91□□□□□ -0.18
NECTIN3-202ENST00000461477 KIAA0232Q92628 1395 aa13.9□□□□□ -0.18
NECTIN3-202ENST00000461477 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.19
NECTIN3-202ENST00000461477 YY1P25490 414 aa13.89□□□□□ -0.19
NECTIN3-202ENST00000461477 APBA3O96018 575 aa13.88□□□□□ -0.19
NECTIN3-202ENST00000461477 PRDM11Q9NQV5 511 aa13.88□□□□□ -0.19
NECTIN3-202ENST00000461477 POGKQ9P215 609 aa13.87□□□□□ -0.19
NECTIN3-202ENST00000461477 TRAK1Q9UPV9 953 aa13.87□□□□□ -0.19
NECTIN3-202ENST00000461477 LMO7Q8WWI1 1683 aa13.87□□□□□ -0.19
NECTIN3-202ENST00000461477 ATP7BP35670 1465 aa13.87□□□□□ -0.19
NECTIN3-202ENST00000461477 GPRASP1Q5JY77 1395 aa13.86□□□□□ -0.19
NECTIN3-202ENST00000461477 NUTM2GQ5VZR2 741 aa13.86□□□□□ -0.19
NECTIN3-202ENST00000461477 FAM196AQ6ZSG2 479 aa13.86□□□□□ -0.19
NECTIN3-202ENST00000461477 PROM2Q8N271 834 aa13.86□□□□□ -0.19
NECTIN3-202ENST00000461477 STRN4Q9NRL3 753 aa13.86□□□□□ -0.19
NECTIN3-202ENST00000461477 CEP350Q5VT06 3117 aa13.86□□□□□ -0.19
NECTIN3-202ENST00000461477 NRKQ7Z2Y5 1582 aa13.86□□□□□ -0.19
NECTIN3-202ENST00000461477 ARHGEF28Q8N1W1 1705 aaKnown RBP13.86□□□□□ -0.19
NECTIN3-202ENST00000461477 ITSN1Q15811 1721 aa13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 PEAK1Q9H792 1746 aa13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 ZC3H6P61129 1189 aaKnown RBP13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 USP35Q9P2H5 1018 aa13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 CASZ1Q86V15 1759 aa13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 SBF2Q86WG5 1849 aa13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 TOPAZ1Q8N9V7 1692 aa13.85□□□□□ -0.19
NECTIN3-202ENST00000461477 PARD3Q8TEW0 1356 aa13.84□□□□□ -0.19
NECTIN3-202ENST00000461477 SSH2Q76I76 1423 aa13.84□□□□□ -0.19
NECTIN3-202ENST00000461477 LARP1Q6PKG0 1096 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms