RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 ADGRL3Q9HAR2 1447 aa10.58□□□□□ -0.72
ABCA4-202ENST00000460514 ADGRB2O60241 1585 aa10.57□□□□□ -0.72
ABCA4-202ENST00000460514 TESK2Q96S53 571 aa10.57□□□□□ -0.72
ABCA4-202ENST00000460514 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
ABCA4-202ENST00000460514 DCCP43146 1447 aa10.57□□□□□ -0.72
ABCA4-202ENST00000460514 LTBP4Q8N2S1 1624 aa10.56□□□□□ -0.72
ABCA4-202ENST00000460514 WASLO00401 505 aaPredicted RBP10.56□□□□□ -0.72
ABCA4-202ENST00000460514 ATF3P18847 181 aa10.56□□□□□ -0.72
ABCA4-202ENST00000460514 PUS7Q96PZ0 661 aaKnown RBP10.56□□□□□ -0.72
ABCA4-202ENST00000460514 SRPK2P78362 688 aaKnown RBP10.55□□□□□ -0.72
ABCA4-202ENST00000460514 CADPS2Q86UW7 1296 aa10.55□□□□□ -0.72
ABCA4-202ENST00000460514 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
ABCA4-202ENST00000460514 CDC42BPGQ6DT37 1551 aa10.55□□□□□ -0.72
ABCA4-202ENST00000460514 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.55□□□□□ -0.72
ABCA4-202ENST00000460514 NALCNQ8IZF0 1738 aa10.54□□□□□ -0.72
ABCA4-202ENST00000460514 CDK19Q9BWU1 502 aa10.54□□□□□ -0.72
ABCA4-202ENST00000460514 IQSEC2Q5JU85 1478 aa10.54□□□□□ -0.72
ABCA4-202ENST00000460514 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
ABCA4-202ENST00000460514 ZNF316A6NFI3 1004 aaPredicted RBP10.53□□□□□ -0.72
ABCA4-202ENST00000460514 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
ABCA4-202ENST00000460514 TULP4Q9NRJ4 1543 aa10.53□□□□□ -0.72
ABCA4-202ENST00000460514 ANKARQ7Z5J8 1434 aa10.52□□□□□ -0.73
ABCA4-202ENST00000460514 FKBP8Q14318 412 aa10.52□□□□□ -0.73
ABCA4-202ENST00000460514 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.73
ABCA4-202ENST00000460514 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
ABCA4-202ENST00000460514 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
ABCA4-202ENST00000460514 POLR3GLQ9BT43 218 aa10.51□□□□□ -0.73
ABCA4-202ENST00000460514 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
ABCA4-202ENST00000460514 FMN2Q9NZ56 1722 aa10.5□□□□□ -0.73
ABCA4-202ENST00000460514 SLAIN1Q8ND83 568 aa10.5□□□□□ -0.73
ABCA4-202ENST00000460514 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
ABCA4-202ENST00000460514 NUDT16Q96DE0 195 aaKnown RBP10.5□□□□□ -0.73
ABCA4-202ENST00000460514 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
ABCA4-202ENST00000460514 CCDC7Q96M83 1385 aa10.5□□□□□ -0.73
ABCA4-202ENST00000460514 TOM1O60784 492 aa10.49□□□□□ -0.73
ABCA4-202ENST00000460514 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
ABCA4-202ENST00000460514 ITSN1Q15811 1721 aa10.49□□□□□ -0.73
ABCA4-202ENST00000460514 SEC24BO95487 1268 aa10.48□□□□□ -0.73
ABCA4-202ENST00000460514 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
ABCA4-202ENST00000460514 ATP7BP35670 1465 aa10.48□□□□□ -0.73
ABCA4-202ENST00000460514 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
ABCA4-202ENST00000460514 ESCO1Q5FWF5 840 aa10.47□□□□□ -0.73
ABCA4-202ENST00000460514 TERF2IPQ9NYB0 399 aa10.47□□□□□ -0.73
ABCA4-202ENST00000460514 SLAIN2Q9P270 581 aa10.47□□□□□ -0.73
ABCA4-202ENST00000460514 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
ABCA4-202ENST00000460514 MST1RQ04912 1400 aa10.47□□□□□ -0.73
ABCA4-202ENST00000460514 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
ABCA4-202ENST00000460514 C1orf167Q5SNV9 1468 aa10.47□□□□□ -0.73
ABCA4-202ENST00000460514 C11orf95C9JLR9 678 aaPredicted RBP10.46□□□□□ -0.73
ABCA4-202ENST00000460514 HDGFL2Q7Z4V5 671 aaPredicted RBP10.46□□□□□ -0.73
ABCA4-202ENST00000460514 TMEM121BQ9BXQ6 578 aaPredicted RBP10.46□□□□□ -0.73
ABCA4-202ENST00000460514 BMP2KQ9NSY1 1161 aaPredicted RBP10.46□□□□□ -0.73
ABCA4-202ENST00000460514 PHF8Q9UPP1 1060 aa10.46□□□□□ -0.73
ABCA4-202ENST00000460514 PRR36Q9H6K5 1346 aa10.46□□□□□ -0.73
ABCA4-202ENST00000460514 KIF1AQ12756 1690 aa10.45□□□□□ -0.74
ABCA4-202ENST00000460514 TOPAZ1Q8N9V7 1692 aa10.45□□□□□ -0.74
ABCA4-202ENST00000460514 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
ABCA4-202ENST00000460514 UBAP1LF5GYI3 381 aa10.45□□□□□ -0.74
ABCA4-202ENST00000460514 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
ABCA4-202ENST00000460514 CABP1Q9NZU7 370 aa10.45□□□□□ -0.74
ABCA4-202ENST00000460514 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
ABCA4-202ENST00000460514 USP32Q8NFA0 1604 aa10.44□□□□□ -0.74
ABCA4-202ENST00000460514 ANKRD36BQ8N2N9 1353 aa10.44□□□□□ -0.74
ABCA4-202ENST00000460514 SLC12A5Q9H2X9 1139 aa10.43□□□□□ -0.74
ABCA4-202ENST00000460514 RGPD8O14715 1765 aaPredicted RBP10.43□□□□□ -0.74
ABCA4-202ENST00000460514 POLR3AO14802 1390 aaPredicted RBP10.42□□□□□ -0.74
ABCA4-202ENST00000460514 BRD4O60885 1362 aaPredicted RBP10.42□□□□□ -0.74
ABCA4-202ENST00000460514 ACEP12821 1306 aa10.42□□□□□ -0.74
ABCA4-202ENST00000460514 NPHP3Q7Z494 1330 aa10.42□□□□□ -0.74
ABCA4-202ENST00000460514 MYOM1P52179 1685 aa10.42□□□□□ -0.74
ABCA4-202ENST00000460514 PMFBP1Q8TBY8 1022 aa10.42□□□□□ -0.74
ABCA4-202ENST00000460514 ORAI2Q96SN7 254 aa10.42□□□□□ -0.74
ABCA4-202ENST00000460514 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
ABCA4-202ENST00000460514 MNX1P50219 401 aaPredicted RBP10.41□□□□□ -0.74
ABCA4-202ENST00000460514 PSME1Q06323 249 aa10.41□□□□□ -0.74
ABCA4-202ENST00000460514 BRINP3Q76B58 766 aa10.41□□□□□ -0.74
ABCA4-202ENST00000460514 PROM2Q8N271 834 aa10.41□□□□□ -0.74
ABCA4-202ENST00000460514 PANK3Q9H999 370 aa10.41□□□□□ -0.74
ABCA4-202ENST00000460514 CPSF1Q10570 1443 aaKnown RBP10.41□□□□□ -0.74
ABCA4-202ENST00000460514 FOXO3O43524 673 aa10.4□□□□□ -0.74
ABCA4-202ENST00000460514 DDX10Q13206 875 aaKnown RBP10.4□□□□□ -0.74
ABCA4-202ENST00000460514 KNSTRNQ9Y448 316 aa10.4□□□□□ -0.74
ABCA4-202ENST00000460514 EDC4Q6P2E9 1401 aaKnown RBP10.4□□□□□ -0.75
ABCA4-202ENST00000460514 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
ABCA4-202ENST00000460514 AKAP12Q02952 1782 aa10.39□□□□□ -0.75
ABCA4-202ENST00000460514 ROBO1Q9Y6N7 1651 aa10.39□□□□□ -0.75
ABCA4-202ENST00000460514 PIP4K2BP78356 416 aa10.39□□□□□ -0.75
ABCA4-202ENST00000460514 USP6P35125 1406 aa10.39□□□□□ -0.75
ABCA4-202ENST00000460514 CGNL1Q0VF96 1302 aa10.38□□□□□ -0.75
ABCA4-202ENST00000460514 TTC21AQ8NDW8 1320 aa10.38□□□□□ -0.75
ABCA4-202ENST00000460514 CD163L1Q9NR16 1453 aa10.38□□□□□ -0.75
ABCA4-202ENST00000460514 TIE1P35590 1138 aa10.38□□□□□ -0.75
ABCA4-202ENST00000460514 KRT28Q7Z3Y7 464 aa10.38□□□□□ -0.75
ABCA4-202ENST00000460514 MON2Q7Z3U7 1717 aa10.38□□□□□ -0.75
ABCA4-202ENST00000460514 NSD3Q9BZ95 1437 aa10.37□□□□□ -0.75
ABCA4-202ENST00000460514 SBNO1A3KN83 1393 aa10.37□□□□□ -0.75
ABCA4-202ENST00000460514 NHSL1Q5SYE7 1610 aa10.36□□□□□ -0.75
ABCA4-202ENST00000460514 AHDC1Q5TGY3 1603 aaPredicted RBP10.36□□□□□ -0.75
ABCA4-202ENST00000460514 NSD2O96028 1365 aa10.36□□□□□ -0.75
ABCA4-202ENST00000460514 SOS2Q07890 1332 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms