RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
SRRT-206ENST00000460194 GPRASP1Q5JY77 1395 aa19.49■□□□□ 0.71
SRRT-206ENST00000460194 STAC3Q96MF2 364 aa19.49■□□□□ 0.71
SRRT-206ENST00000460194 SPATA31A5Q5VU36 1347 aa19.49■□□□□ 0.71
SRRT-206ENST00000460194 SPATA31A7Q8IWB4 1347 aa19.49■□□□□ 0.71
SRRT-206ENST00000460194 PHRF1Q9P1Y6 1649 aaKnown RBP19.48■□□□□ 0.71
SRRT-206ENST00000460194 FAM98CQ17RN3 349 aaKnown RBP19.48■□□□□ 0.71
SRRT-206ENST00000460194 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
SRRT-206ENST00000460194 CCDC9Q9Y3X0 531 aaKnown RBP19.48■□□□□ 0.71
SRRT-206ENST00000460194 TOPAZ1Q8N9V7 1692 aa19.48■□□□□ 0.71
SRRT-206ENST00000460194 RGPD1P0DJD0 1748 aa19.48■□□□□ 0.71
SRRT-206ENST00000460194 TNS1Q9HBL0 1735 aaKnown RBP19.48■□□□□ 0.71
SRRT-206ENST00000460194 HRCP23327 699 aa19.46■□□□□ 0.71
SRRT-206ENST00000460194 SF3B2Q13435 895 aaKnown RBP19.45■□□□□ 0.7
SRRT-206ENST00000460194 DISP2A7MBM2 1401 aa19.43■□□□□ 0.7
SRRT-206ENST00000460194 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
SRRT-206ENST00000460194 NUDT16Q96DE0 195 aaKnown RBP19.43■□□□□ 0.7
SRRT-206ENST00000460194 POLR3AO14802 1390 aaPredicted RBP19.43■□□□□ 0.7
SRRT-206ENST00000460194 FAM182BQ5T319 152 aa19.42■□□□□ 0.7
SRRT-206ENST00000460194 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
SRRT-206ENST00000460194 SPATA31A1Q5TZJ5 1347 aa19.41■□□□□ 0.7
SRRT-206ENST00000460194 KIAA0232Q92628 1395 aa19.41■□□□□ 0.7
SRRT-206ENST00000460194 BAG6P46379 1132 aa19.4■□□□□ 0.7
SRRT-206ENST00000460194 PRDM11Q9NQV5 511 aa19.39■□□□□ 0.69
SRRT-206ENST00000460194 LMO7Q8WWI1 1683 aa19.39■□□□□ 0.69
SRRT-206ENST00000460194 PAK3O75914 559 aaPredicted RBP19.38■□□□□ 0.69
SRRT-206ENST00000460194 EN1Q05925 392 aaPredicted RBP19.38■□□□□ 0.69
SRRT-206ENST00000460194 NRKQ7Z2Y5 1582 aa19.38■□□□□ 0.69
SRRT-206ENST00000460194 CDK19Q9BWU1 502 aa19.38■□□□□ 0.69
SRRT-206ENST00000460194 PLEKHG3A1L390 1219 aa19.37■□□□□ 0.69
SRRT-206ENST00000460194 PSDA5PKW4 1024 aaPredicted RBP19.37■□□□□ 0.69
SRRT-206ENST00000460194 CAMTA1Q9Y6Y1 1673 aa19.36■□□□□ 0.69
SRRT-206ENST00000460194 A0A0G2JS52 829 aa19.36■□□□□ 0.69
SRRT-206ENST00000460194 MYT1Q01538 1121 aa19.36■□□□□ 0.69
SRRT-206ENST00000460194 CHRNA2Q15822 529 aa19.36■□□□□ 0.69
SRRT-206ENST00000460194 NBPF8Q3BBV2 869 aa19.36■□□□□ 0.69
SRRT-206ENST00000460194 ACEP12821 1306 aa19.35■□□□□ 0.69
SRRT-206ENST00000460194 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
SRRT-206ENST00000460194 ZC3H6P61129 1189 aaKnown RBP19.33■□□□□ 0.68
SRRT-206ENST00000460194 CAMKK2Q96RR4 588 aa19.33■□□□□ 0.68
SRRT-206ENST00000460194 RREB1Q92766 1687 aa19.33■□□□□ 0.68
SRRT-206ENST00000460194 SSH2Q76I76 1423 aa19.33■□□□□ 0.68
SRRT-206ENST00000460194 CPDO75976 1380 aa19.32■□□□□ 0.68
SRRT-206ENST00000460194 USP19O94966 1318 aa19.32■□□□□ 0.68
SRRT-206ENST00000460194 NBPF1Q3BBV0 1214 aa19.32■□□□□ 0.68
SRRT-206ENST00000460194 NUTM2GQ5VZR2 741 aa19.32■□□□□ 0.68
SRRT-206ENST00000460194 BARGINQ6ZT62 677 aa19.32■□□□□ 0.68
SRRT-206ENST00000460194 EZH2Q15910 746 aaKnown RBP19.31■□□□□ 0.68
SRRT-206ENST00000460194 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
SRRT-206ENST00000460194 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
SRRT-206ENST00000460194 NUP188Q5SRE5 1749 aa19.29■□□□□ 0.68
SRRT-206ENST00000460194 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
SRRT-206ENST00000460194 TRIM37O94972 964 aa19.28■□□□□ 0.68
SRRT-206ENST00000460194 R3HDM1Q15032 1099 aaKnown RBP19.28■□□□□ 0.68
SRRT-206ENST00000460194 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
SRRT-206ENST00000460194 PEAK1Q9H792 1746 aa19.26■□□□□ 0.67
SRRT-206ENST00000460194 ABTB2Q8N961 1025 aa19.26■□□□□ 0.67
SRRT-206ENST00000460194 QRICH2Q9H0J4 1663 aa19.26■□□□□ 0.67
SRRT-206ENST00000460194 COL18A1P39060 1754 aa19.26■□□□□ 0.67
SRRT-206ENST00000460194 PPIP5K1Q6PFW1 1433 aa19.25■□□□□ 0.67
SRRT-206ENST00000460194 COL5A2P05997 1499 aaPredicted RBP19.25■□□□□ 0.67
SRRT-206ENST00000460194 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
SRRT-206ENST00000460194 SBF2Q86WG5 1849 aa19.25■□□□□ 0.67
SRRT-206ENST00000460194 GCP02774 474 aa19.24■□□□□ 0.67
SRRT-206ENST00000460194 USP35Q9P2H5 1018 aa19.24■□□□□ 0.67
SRRT-206ENST00000460194 BRD4O60885 1362 aaPredicted RBP19.23■□□□□ 0.67
SRRT-206ENST00000460194 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
SRRT-206ENST00000460194 SLIT3O75094 1523 aa19.23■□□□□ 0.67
SRRT-206ENST00000460194 APBA3O96018 575 aa19.22■□□□□ 0.67
SRRT-206ENST00000460194 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
SRRT-206ENST00000460194 THRAP3Q9Y2W1 955 aaKnown RBP19.22■□□□□ 0.67
SRRT-206ENST00000460194 CENPJQ9HC77 1338 aaPredicted RBP19.22■□□□□ 0.67
SRRT-206ENST00000460194 PIK3C2AO00443 1686 aa19.21■□□□□ 0.67
SRRT-206ENST00000460194 USP6P35125 1406 aa19.21■□□□□ 0.67
SRRT-206ENST00000460194 EVA1CP58658 441 aa19.21■□□□□ 0.67
SRRT-206ENST00000460194 NLRP13Q86W25 1043 aa19.21■□□□□ 0.67
SRRT-206ENST00000460194 WNK3Q9BYP7 1800 aa19.2■□□□□ 0.66
SRRT-206ENST00000460194 RGPD3A6NKT7 1758 aaPredicted RBP19.19■□□□□ 0.66
SRRT-206ENST00000460194 RGPD4Q7Z3J3 1758 aa19.19■□□□□ 0.66
SRRT-206ENST00000460194 LRRC37A3O60309 1634 aa19.19■□□□□ 0.66
SRRT-206ENST00000460194 PDE3BQ13370 1112 aa19.19■□□□□ 0.66
SRRT-206ENST00000460194 CRB1P82279 1406 aa19.18■□□□□ 0.66
SRRT-206ENST00000460194 SRPK2P78362 688 aaKnown RBP19.18■□□□□ 0.66
SRRT-206ENST00000460194 RGPD5Q99666 1765 aa19.18■□□□□ 0.66
SRRT-206ENST00000460194 AATKQ6ZMQ8 1374 aa19.18■□□□□ 0.66
SRRT-206ENST00000460194 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
SRRT-206ENST00000460194 AKAP12Q02952 1782 aa19.17■□□□□ 0.66
SRRT-206ENST00000460194 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
SRRT-206ENST00000460194 L3MBTL2Q969R5 705 aa19.14■□□□□ 0.65
SRRT-206ENST00000460194 AXIN2Q9Y2T1 843 aa19.14■□□□□ 0.65
SRRT-206ENST00000460194 NLRP6P59044 892 aa19.13■□□□□ 0.65
SRRT-206ENST00000460194 OVOS2A0A0G2JMS6 1433 aa19.11■□□□□ 0.65
SRRT-206ENST00000460194 OVOS2A0A0J9YW53 1432 aa19.11■□□□□ 0.65
SRRT-206ENST00000460194 BCL9O00512 1426 aa19.11■□□□□ 0.65
SRRT-206ENST00000460194 OVOS2Q6IE36 1432 aa19.11■□□□□ 0.65
SRRT-206ENST00000460194 PTF1AQ7RTS3 328 aa19.11■□□□□ 0.65
SRRT-206ENST00000460194 C11orf95C9JLR9 678 aaPredicted RBP19.1■□□□□ 0.65
SRRT-206ENST00000460194 PLSCR1O15162 318 aa19.1■□□□□ 0.65
SRRT-206ENST00000460194 CASZ1Q86V15 1759 aa19.1■□□□□ 0.65
SRRT-206ENST00000460194 CPSF1Q10570 1443 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms