RNA–Protein interactions for RNA: ENST00000458632.2

SHANK2-212, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-212ENST00000458632 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
SHANK2-212ENST00000458632 WASHC2AQ641Q2 1341 aa17.2■□□□□ 0.34
SHANK2-212ENST00000458632 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
SHANK2-212ENST00000458632 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
SHANK2-212ENST00000458632 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
SHANK2-212ENST00000458632 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
SHANK2-212ENST00000458632 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
SHANK2-212ENST00000458632 NME9Q86XW9 330 aa17.18■□□□□ 0.34
SHANK2-212ENST00000458632 FYB1O15117 783 aa17.17■□□□□ 0.34
SHANK2-212ENST00000458632 CD163L1Q9NR16 1453 aa17.17■□□□□ 0.34
SHANK2-212ENST00000458632 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
SHANK2-212ENST00000458632 USP6P35125 1406 aa17.16■□□□□ 0.34
SHANK2-212ENST00000458632 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
SHANK2-212ENST00000458632 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
SHANK2-212ENST00000458632 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
SHANK2-212ENST00000458632 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
SHANK2-212ENST00000458632 GCP02774 474 aa17.15■□□□□ 0.34
SHANK2-212ENST00000458632 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
SHANK2-212ENST00000458632 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
SHANK2-212ENST00000458632 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
SHANK2-212ENST00000458632 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
SHANK2-212ENST00000458632 ARHGEF10O15013 1369 aa17.14■□□□□ 0.33
SHANK2-212ENST00000458632 ANKRD36BQ8N2N9 1353 aa17.14■□□□□ 0.33
SHANK2-212ENST00000458632 HAP1P54257 671 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-212ENST00000458632 NGLY1Q96IV0 654 aa17.13■□□□□ 0.33
SHANK2-212ENST00000458632 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-212ENST00000458632 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
SHANK2-212ENST00000458632 FBLN1P23142 703 aa17.12■□□□□ 0.33
SHANK2-212ENST00000458632 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
SHANK2-212ENST00000458632 COL16A1Q07092 1604 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-212ENST00000458632 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
SHANK2-212ENST00000458632 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
SHANK2-212ENST00000458632 C8orf37Q96NL8 207 aa17.1■□□□□ 0.33
SHANK2-212ENST00000458632 FNBP4Q8N3X1 1017 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-212ENST00000458632 NHSL1Q5SYE7 1610 aa17.09■□□□□ 0.33
SHANK2-212ENST00000458632 USP31Q70CQ4 1352 aa17.08■□□□□ 0.32
SHANK2-212ENST00000458632 SOX12O15370 315 aa17.08■□□□□ 0.32
SHANK2-212ENST00000458632 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
SHANK2-212ENST00000458632 COG3Q96JB2 828 aa17.08■□□□□ 0.32
SHANK2-212ENST00000458632 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.32
SHANK2-212ENST00000458632 EDC4Q6P2E9 1401 aaKnown RBP17.07■□□□□ 0.32
SHANK2-212ENST00000458632 USP19O94966 1318 aa17.07■□□□□ 0.32
SHANK2-212ENST00000458632 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-212ENST00000458632 CHRNA2Q15822 529 aa17.07■□□□□ 0.32
SHANK2-212ENST00000458632 KCNH5Q8NCM2 988 aa17.07■□□□□ 0.32
SHANK2-212ENST00000458632 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
SHANK2-212ENST00000458632 ARHGEF25Q86VW2 580 aa17.06■□□□□ 0.32
SHANK2-212ENST00000458632 AMER1Q5JTC6 1135 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-212ENST00000458632 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
SHANK2-212ENST00000458632 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
SHANK2-212ENST00000458632 PRDM11Q9NQV5 511 aa17.04■□□□□ 0.32
SHANK2-212ENST00000458632 AXIN2Q9Y2T1 843 aa17.04■□□□□ 0.32
SHANK2-212ENST00000458632 AFF2P51816 1311 aa17.03■□□□□ 0.32
SHANK2-212ENST00000458632 ZBTB7CA1YPR0 619 aa17.03■□□□□ 0.32
SHANK2-212ENST00000458632 POTEAQ6S8J7 498 aa17.03■□□□□ 0.32
SHANK2-212ENST00000458632 USP21Q9UK80 565 aa17.03■□□□□ 0.32
SHANK2-212ENST00000458632 LRP6O75581 1613 aa17.03■□□□□ 0.32
SHANK2-212ENST00000458632 TOPAZ1Q8N9V7 1692 aa17.02■□□□□ 0.32
SHANK2-212ENST00000458632 BTG4Q9NY30 223 aa17.02■□□□□ 0.32
SHANK2-212ENST00000458632 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.31
SHANK2-212ENST00000458632 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
SHANK2-212ENST00000458632 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-212ENST00000458632 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
SHANK2-212ENST00000458632 TNNT2P45379 298 aaPredicted RBP17■□□□□ 0.31
SHANK2-212ENST00000458632 EVA1CP58658 441 aa17■□□□□ 0.31
SHANK2-212ENST00000458632 ZNF772Q68DY9 489 aaPredicted RBP17■□□□□ 0.31
SHANK2-212ENST00000458632 MORC1Q86VD1 984 aa17■□□□□ 0.31
SHANK2-212ENST00000458632 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
SHANK2-212ENST00000458632 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
SHANK2-212ENST00000458632 TRPM3Q9HCF6 1732 aaPredicted RBP16.98■□□□□ 0.31
SHANK2-212ENST00000458632 IP6K1Q92551 441 aa16.97■□□□□ 0.31
SHANK2-212ENST00000458632 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
SHANK2-212ENST00000458632 CPDO75976 1380 aa16.97■□□□□ 0.31
SHANK2-212ENST00000458632 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
SHANK2-212ENST00000458632 ITSN1Q15811 1721 aa16.96■□□□□ 0.31
SHANK2-212ENST00000458632 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.3
SHANK2-212ENST00000458632 BCL9LQ86UU0 1499 aa16.95■□□□□ 0.3
SHANK2-212ENST00000458632 AMPHP49418 695 aa16.95■□□□□ 0.3
SHANK2-212ENST00000458632 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
SHANK2-212ENST00000458632 TRPC5Q9UL62 973 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-212ENST00000458632 AATKQ6ZMQ8 1374 aa16.94■□□□□ 0.3
SHANK2-212ENST00000458632 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
SHANK2-212ENST00000458632 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
SHANK2-212ENST00000458632 SHPRHQ149N8 1683 aa16.94■□□□□ 0.3
SHANK2-212ENST00000458632 PPM1GO15355 546 aaPredicted RBP16.93■□□□□ 0.3
SHANK2-212ENST00000458632 RXRBP28702 533 aa16.93■□□□□ 0.3
SHANK2-212ENST00000458632 VPS72Q15906 364 aa16.93■□□□□ 0.3
SHANK2-212ENST00000458632 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
SHANK2-212ENST00000458632 EMILIN1Q9Y6C2 1016 aa16.93■□□□□ 0.3
SHANK2-212ENST00000458632 ALS2Q96Q42 1657 aa16.93■□□□□ 0.3
SHANK2-212ENST00000458632 OVOS2A0A0J9YW53 1432 aa16.93■□□□□ 0.3
SHANK2-212ENST00000458632 OVOS2Q6IE36 1432 aa16.93■□□□□ 0.3
SHANK2-212ENST00000458632 HOXC9P31274 260 aa16.92■□□□□ 0.3
SHANK2-212ENST00000458632 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
SHANK2-212ENST00000458632 RBM6P78332 1123 aaKnown RBP16.91■□□□□ 0.3
SHANK2-212ENST00000458632 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
SHANK2-212ENST00000458632 CCDC9Q9Y3X0 531 aaKnown RBP16.91■□□□□ 0.3
SHANK2-212ENST00000458632 SLIT2O94813 1529 aa16.91■□□□□ 0.3
SHANK2-212ENST00000458632 ONECUT3O60422 494 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-212ENST00000458632 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms