RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ZFYVE9O95405 1425 aa3.47□□□□□ -1.85
NEDD1-204ENST00000457368 UBTFP17480 764 aaKnown RBP3.47□□□□□ -1.85
NEDD1-204ENST00000457368 PTPN5P54829 565 aa3.47□□□□□ -1.85
NEDD1-204ENST00000457368 MEX3CQ5U5Q3 659 aaKnown RBP3.47□□□□□ -1.85
NEDD1-204ENST00000457368 NGLY1Q96IV0 654 aa3.47□□□□□ -1.85
NEDD1-204ENST00000457368 C19orf44Q9H6X5 657 aa3.47□□□□□ -1.85
NEDD1-204ENST00000457368 NHSL1Q5SYE7 1610 aa3.47□□□□□ -1.85
NEDD1-204ENST00000457368 SOX12O15370 315 aa3.47□□□□□ -1.85
NEDD1-204ENST00000457368 RTN4Q9NQC3 1192 aaKnown RBP3.47□□□□□ -1.85
NEDD1-204ENST00000457368 LHX6Q9UPM6 363 aa3.47□□□□□ -1.85
NEDD1-204ENST00000457368 ADGRB3O60242 1522 aa3.46□□□□□ -1.85
NEDD1-204ENST00000457368 DUOX2Q9NRD8 1548 aa3.46□□□□□ -1.85
NEDD1-204ENST00000457368 PTCH1Q13635 1447 aa3.46□□□□□ -1.85
NEDD1-204ENST00000457368 ERBINQ96RT1 1412 aa3.46□□□□□ -1.85
NEDD1-204ENST00000457368 PIK3C2BO00750 1634 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 PSEN2P49810 448 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 GPR153Q6NV75 609 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 FNBP4Q8N3X1 1017 aaPredicted RBP3.46□□□□□ -1.86
NEDD1-204ENST00000457368 SLC52A1Q9NWF4 448 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 ATRNO75882 1429 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 PNPLA6Q8IY17 1366 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 TSPY4P0CV99 314 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 TSPY10P0CW01 314 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 BRINP3Q76B58 766 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 QTRT2Q9H974 415 aaKnown RBP3.46□□□□□ -1.86
NEDD1-204ENST00000457368 LAMC1P11047 1609 aa3.46□□□□□ -1.86
NEDD1-204ENST00000457368 IDI1Q13907 227 aa3.45□□□□□ -1.86
NEDD1-204ENST00000457368 LRRC59Q96AG4 307 aaKnown RBP3.45□□□□□ -1.86
NEDD1-204ENST00000457368 KCTD12Q96CX2 325 aaKnown RBP3.45□□□□□ -1.86
NEDD1-204ENST00000457368 CHD2O14647 1828 aaKnown RBP3.45□□□□□ -1.86
NEDD1-204ENST00000457368 RPRD2Q5VT52 1461 aaKnown RBP3.45□□□□□ -1.86
NEDD1-204ENST00000457368 HDGFP51858 240 aaKnown RBP3.45□□□□□ -1.86
NEDD1-204ENST00000457368 ADAMTS13Q76LX8 1427 aa3.45□□□□□ -1.86
NEDD1-204ENST00000457368 ASXL1Q8IXJ9 1541 aa3.45□□□□□ -1.86
NEDD1-204ENST00000457368 BLMP54132 1417 aaPredicted RBP3.45□□□□□ -1.86
NEDD1-204ENST00000457368 MST1RQ04912 1400 aa3.45□□□□□ -1.86
NEDD1-204ENST00000457368 ZNF316A6NFI3 1004 aaPredicted RBP3.45□□□□□ -1.86
NEDD1-204ENST00000457368 FBXO22Q8NEZ5 403 aa3.45□□□□□ -1.86
NEDD1-204ENST00000457368 SLC26A8Q96RN1 970 aa3.45□□□□□ -1.86
NEDD1-204ENST00000457368 TRPC5Q9UL62 973 aaPredicted RBP3.45□□□□□ -1.86
NEDD1-204ENST00000457368 RBM33Q96EV2 1170 aaKnown RBP3.44□□□□□ -1.86
NEDD1-204ENST00000457368 KCNK17Q96T54 332 aa3.44□□□□□ -1.86
NEDD1-204ENST00000457368 TAOK2Q9UL54 1235 aa3.44□□□□□ -1.86
NEDD1-204ENST00000457368 BCL9LQ86UU0 1499 aa3.44□□□□□ -1.86
NEDD1-204ENST00000457368 UNC13BO14795 1591 aa3.44□□□□□ -1.86
NEDD1-204ENST00000457368 ATF3P18847 181 aa3.44□□□□□ -1.86
NEDD1-204ENST00000457368 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.44□□□□□ -1.86
NEDD1-204ENST00000457368 STAC3Q96MF2 364 aa3.44□□□□□ -1.86
NEDD1-204ENST00000457368 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.44□□□□□ -1.86
NEDD1-204ENST00000457368 PRAG1Q86YV5 1406 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 NUTM2BA6NNL0 878 aaPredicted RBP3.43□□□□□ -1.86
NEDD1-204ENST00000457368 NUTM2EB1AL46 878 aaPredicted RBP3.43□□□□□ -1.86
NEDD1-204ENST00000457368 NUTM2DQ5VT03 806 aaPredicted RBP3.43□□□□□ -1.86
NEDD1-204ENST00000457368 NUTM2AQ8IVF1 878 aaPredicted RBP3.43□□□□□ -1.86
NEDD1-204ENST00000457368 SOS2Q07890 1332 aaPredicted RBP3.43□□□□□ -1.86
NEDD1-204ENST00000457368 PTPN23Q9H3S7 1636 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 CEP152O94986 1710 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 KANK1Q14678 1352 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 RGS20O76081 388 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 LSM11P83369 360 aaKnown RBP eCLIP3.43□□□□□ -1.86
NEDD1-204ENST00000457368 PLPP6Q8IY26 295 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 MYOM3Q5VTT5 1437 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 RIMS2Q9UQ26 1411 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 DSG2Q14126 1118 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 SPHKAPQ2M3C7 1700 aa3.43□□□□□ -1.86
NEDD1-204ENST00000457368 COL22A1Q8NFW1 1626 aaPredicted RBP3.42□□□□□ -1.86
NEDD1-204ENST00000457368 MYOM2P54296 1465 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 KIF15Q9NS87 1388 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 PCDHGA4Q9Y5G9 962 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 TRPM2O94759 1503 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 PPP1R15AO75807 674 aaPredicted RBP3.42□□□□□ -1.86
NEDD1-204ENST00000457368 ZNF687Q8N1G0 1237 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 ZNF454Q8N9F8 522 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 C8orf37Q96NL8 207 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 USP21Q9UK80 565 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 PTPRUQ92729 1446 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 ADGRL3Q9HAR2 1447 aa3.42□□□□□ -1.86
NEDD1-204ENST00000457368 XRN1Q8IZH2 1706 aaKnown RBP3.42□□□□□ -1.86
NEDD1-204ENST00000457368 DISP2A7MBM2 1401 aa3.41□□□□□ -1.86
NEDD1-204ENST00000457368 ONECUT3O60422 494 aaPredicted RBP3.41□□□□□ -1.86
NEDD1-204ENST00000457368 TMEM131LA2VDJ0 1609 aa3.41□□□□□ -1.86
NEDD1-204ENST00000457368 IFFO2Q5TF58 517 aa3.41□□□□□ -1.86
NEDD1-204ENST00000457368 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.41□□□□□ -1.86
NEDD1-204ENST00000457368 ABCC5O15440 1437 aa3.41□□□□□ -1.86
NEDD1-204ENST00000457368 HRCP23327 699 aa3.41□□□□□ -1.86
NEDD1-204ENST00000457368 POTEEQ6S8J3 1075 aa3.41□□□□□ -1.86
NEDD1-204ENST00000457368 GJD4Q96KN9 370 aaPredicted RBP3.41□□□□□ -1.86
NEDD1-204ENST00000457368 C1orf167Q5SNV9 1468 aa3.4□□□□□ -1.86
NEDD1-204ENST00000457368 RALGAPBQ86X10 1494 aa3.4□□□□□ -1.86
NEDD1-204ENST00000457368 AMOTL2Q9Y2J4 779 aa3.4□□□□□ -1.86
NEDD1-204ENST00000457368 SLIT2O94813 1529 aa3.4□□□□□ -1.86
NEDD1-204ENST00000457368 ADGRL2O95490 1459 aa3.39□□□□□ -1.87
NEDD1-204ENST00000457368 GOLGA8CPA6NN73 597 aa3.39□□□□□ -1.87
NEDD1-204ENST00000457368 DMRTA1Q5VZB9 504 aa3.39□□□□□ -1.87
NEDD1-204ENST00000457368 LARP6Q9BRS8 491 aaKnown RBP3.39□□□□□ -1.87
NEDD1-204ENST00000457368 RBAK-RBAKDNI3L0D1 243 aa3.39□□□□□ -1.87
NEDD1-204ENST00000457368 NKX1-1Q15270 411 aaPredicted RBP3.39□□□□□ -1.87
NEDD1-204ENST00000457368 C14orf37Q86TY3 774 aa3.39□□□□□ -1.87
NEDD1-204ENST00000457368 GLI3P10071 1580 aa3.39□□□□□ -1.87
NEDD1-204ENST00000457368 ADAMTS2O95450 1211 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms