RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 TRAPPC8Q9Y2L5 1435 aa11.2□□□□□ -0.62
COMMD3-204ENST00000456711 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
COMMD3-204ENST00000456711 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
COMMD3-204ENST00000456711 GRXCR2A6NFK2 248 aa11.18□□□□□ -0.62
COMMD3-204ENST00000456711 NFX1Q12986 1120 aaKnown RBP11.18□□□□□ -0.62
COMMD3-204ENST00000456711 PLA2G2CQ5R387 149 aa11.18□□□□□ -0.62
COMMD3-204ENST00000456711 TTC13Q8NBP0 860 aa11.17□□□□□ -0.62
COMMD3-204ENST00000456711 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
COMMD3-204ENST00000456711 LOC100996750A0A140TA64 210 aa11.16□□□□□ -0.62
COMMD3-204ENST00000456711 LCE2CQ5TA81 110 aa11.16□□□□□ -0.62
COMMD3-204ENST00000456711 POTEAQ6S8J7 498 aa11.16□□□□□ -0.62
COMMD3-204ENST00000456711 KRTAP4-6Q9BYQ5 205 aa11.16□□□□□ -0.62
COMMD3-204ENST00000456711 GMPR2Q9P2T1 348 aaKnown RBP11.16□□□□□ -0.62
COMMD3-204ENST00000456711 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
COMMD3-204ENST00000456711 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
COMMD3-204ENST00000456711 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.63
COMMD3-204ENST00000456711 RAPGEF2Q9Y4G8 1499 aa11.14□□□□□ -0.63
COMMD3-204ENST00000456711 WIPF1O43516 503 aa11.14□□□□□ -0.63
COMMD3-204ENST00000456711 PKD2L1Q9P0L9 805 aa11.14□□□□□ -0.63
COMMD3-204ENST00000456711 PTPRKQ15262 1439 aa11.13□□□□□ -0.63
COMMD3-204ENST00000456711 OSBPP22059 807 aa11.13□□□□□ -0.63
COMMD3-204ENST00000456711 CPS1P31327 1500 aa11.13□□□□□ -0.63
COMMD3-204ENST00000456711 ALKQ9UM73 1620 aa11.13□□□□□ -0.63
COMMD3-204ENST00000456711 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
COMMD3-204ENST00000456711 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
COMMD3-204ENST00000456711 EYA1Q99502 592 aa11.12□□□□□ -0.63
COMMD3-204ENST00000456711 CTTNBP2Q8WZ74 1663 aa11.11□□□□□ -0.63
COMMD3-204ENST00000456711 C11orf95C9JLR9 678 aaPredicted RBP11.11□□□□□ -0.63
COMMD3-204ENST00000456711 FOXC1Q12948 553 aa11.11□□□□□ -0.63
COMMD3-204ENST00000456711 FAM9AQ8IZU1 332 aaPredicted RBP11.11□□□□□ -0.63
COMMD3-204ENST00000456711 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
COMMD3-204ENST00000456711 NPDC1Q9NQX5 325 aaPredicted RBP11.11□□□□□ -0.63
COMMD3-204ENST00000456711 TCOF1Q13428 1488 aaKnown RBP11.11□□□□□ -0.63
COMMD3-204ENST00000456711 SCAPERQ9BY12 1400 aa11.09□□□□□ -0.63
COMMD3-204ENST00000456711 INSM1Q01101 510 aaPredicted RBP11.09□□□□□ -0.63
COMMD3-204ENST00000456711 ESF1Q9H501 851 aaKnown RBP11.09□□□□□ -0.63
COMMD3-204ENST00000456711 SUPT6HQ7KZ85 1726 aaKnown RBP11.09□□□□□ -0.63
COMMD3-204ENST00000456711 NPATQ14207 1427 aa11.08□□□□□ -0.64
COMMD3-204ENST00000456711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
COMMD3-204ENST00000456711 SHANK2Q9UPX8 1470 aa11.06□□□□□ -0.64
COMMD3-204ENST00000456711 SRCAPQ6ZRS2 3230 aa11.06□□□□□ -0.64
COMMD3-204ENST00000456711 AGLP35573 1532 aa11.06□□□□□ -0.64
COMMD3-204ENST00000456711 ZNF142P52746 1687 aaPredicted RBP11.06□□□□□ -0.64
COMMD3-204ENST00000456711 AVPP01185 164 aa11.06□□□□□ -0.64
COMMD3-204ENST00000456711 REREQ9P2R6 1566 aa11.06□□□□□ -0.64
COMMD3-204ENST00000456711 SLC4A3P48751 1232 aa11.05□□□□□ -0.64
COMMD3-204ENST00000456711 CNTLNQ9NXG0 1405 aa11.05□□□□□ -0.64
COMMD3-204ENST00000456711 RAPGEF6Q8TEU7 1601 aa11.05□□□□□ -0.64
COMMD3-204ENST00000456711 AXIN1O15169 862 aa11.04□□□□□ -0.64
COMMD3-204ENST00000456711 ADH1BP00325 375 aa11.04□□□□□ -0.64
COMMD3-204ENST00000456711 ACTN4O43707 911 aaKnown RBP11.03□□□□□ -0.64
COMMD3-204ENST00000456711 TOR4AQ9NXH8 423 aa11.03□□□□□ -0.64
COMMD3-204ENST00000456711 CEP170BQ9Y4F5 1589 aaPredicted RBP11.03□□□□□ -0.64
COMMD3-204ENST00000456711 MYO3AQ8NEV4 1616 aa11.02□□□□□ -0.64
COMMD3-204ENST00000456711 MROH2AA6NES4 1674 aa11.02□□□□□ -0.64
COMMD3-204ENST00000456711 PLEKHD1A6NEE1 506 aa11.02□□□□□ -0.65
COMMD3-204ENST00000456711 SLC6A16Q9GZN6 736 aa11.02□□□□□ -0.65
COMMD3-204ENST00000456711 DIP2CQ9Y2E4 1556 aa11.02□□□□□ -0.65
COMMD3-204ENST00000456711 NUP153P49790 1475 aaKnown RBP11□□□□□ -0.65
COMMD3-204ENST00000456711 ZNF518AQ6AHZ1 1483 aa11□□□□□ -0.65
COMMD3-204ENST00000456711 KDM5CP41229 1560 aa10.99□□□□□ -0.65
COMMD3-204ENST00000456711 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
COMMD3-204ENST00000456711 P3H3Q8IVL6 736 aa10.99□□□□□ -0.65
COMMD3-204ENST00000456711 PLCH2O75038 1416 aa10.99□□□□□ -0.65
COMMD3-204ENST00000456711 SNRPBP14678 240 aaKnown RBP10.98□□□□□ -0.65
COMMD3-204ENST00000456711 ZMYM3Q14202 1370 aa10.98□□□□□ -0.65
COMMD3-204ENST00000456711 VWDEQ8N2E2 1590 aa10.98□□□□□ -0.65
COMMD3-204ENST00000456711 RNF17Q9BXT8 1623 aaKnown RBP10.98□□□□□ -0.65
COMMD3-204ENST00000456711 POLR1AO95602 1720 aaPredicted RBP10.98□□□□□ -0.65
COMMD3-204ENST00000456711 CFHP08603 1231 aa10.97□□□□□ -0.65
COMMD3-204ENST00000456711 NEURL4Q96JN8 1562 aa10.97□□□□□ -0.65
COMMD3-204ENST00000456711 ABCA6Q8N139 1617 aa10.97□□□□□ -0.65
COMMD3-204ENST00000456711 TERTO14746 1132 aaKnown RBP10.96□□□□□ -0.65
COMMD3-204ENST00000456711 SMCPP49901 116 aaPredicted RBP10.96□□□□□ -0.65
COMMD3-204ENST00000456711 CTC1Q2NKJ3 1217 aa10.96□□□□□ -0.65
COMMD3-204ENST00000456711 KMT5BQ4FZB7 885 aa10.95□□□□□ -0.66
COMMD3-204ENST00000456711 AFAP1Q8N556 730 aa10.95□□□□□ -0.66
COMMD3-204ENST00000456711 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
COMMD3-204ENST00000456711 DNAJB2P25686 324 aa10.94□□□□□ -0.66
COMMD3-204ENST00000456711 EFCAB2Q5VUJ9 269 aa10.94□□□□□ -0.66
COMMD3-204ENST00000456711 CYP4X1Q8N118 509 aa10.94□□□□□ -0.66
COMMD3-204ENST00000456711 TMEM134Q9H6X4 195 aa10.94□□□□□ -0.66
COMMD3-204ENST00000456711 NR1I2O75469 434 aa10.93□□□□□ -0.66
COMMD3-204ENST00000456711 E2F4Q16254 413 aa10.93□□□□□ -0.66
COMMD3-204ENST00000456711 DNMT1P26358 1616 aaKnown RBP10.93□□□□□ -0.66
COMMD3-204ENST00000456711 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
COMMD3-204ENST00000456711 MLH3Q9UHC1 1453 aa10.93□□□□□ -0.66
COMMD3-204ENST00000456711 SLC10A3P09131 477 aa10.92□□□□□ -0.66
COMMD3-204ENST00000456711 SCUBE3Q8IX30 993 aa10.92□□□□□ -0.66
COMMD3-204ENST00000456711 SUPT5HO00267 1087 aaKnown RBP10.91□□□□□ -0.66
COMMD3-204ENST00000456711 A2ML1A8K2U0 1454 aa10.91□□□□□ -0.66
COMMD3-204ENST00000456711 SYNMO15061 1565 aa10.9□□□□□ -0.66
COMMD3-204ENST00000456711 MYO5CQ9NQX4 1742 aa10.9□□□□□ -0.66
COMMD3-204ENST00000456711 RPIAP49247 311 aa10.9□□□□□ -0.66
COMMD3-204ENST00000456711 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
COMMD3-204ENST00000456711 ATP13A2Q9NQ11 1180 aa10.9□□□□□ -0.66
COMMD3-204ENST00000456711 STRCP1A6NGW2 1772 aa10.9□□□□□ -0.67
COMMD3-204ENST00000456711 SAMD9Q5K651 1589 aa10.9□□□□□ -0.67
COMMD3-204ENST00000456711 CLTCQ00610 1675 aaKnown RBP10.89□□□□□ -0.67
COMMD3-204ENST00000456711 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms