RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
LINC00959-201ENST00000456581 USP32Q8NFA0 1604 aa16.06■□□□□ 0.16
LINC00959-201ENST00000456581 SEC24BO95487 1268 aa16.06■□□□□ 0.16
LINC00959-201ENST00000456581 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
LINC00959-201ENST00000456581 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
LINC00959-201ENST00000456581 U2SURPO15042 1029 aaKnown RBP16.06■□□□□ 0.16
LINC00959-201ENST00000456581 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
LINC00959-201ENST00000456581 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
LINC00959-201ENST00000456581 CFAP53Q96M91 514 aa16.05■□□□□ 0.16
LINC00959-201ENST00000456581 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
LINC00959-201ENST00000456581 PANK1Q8TE04 598 aa16.05■□□□□ 0.16
LINC00959-201ENST00000456581 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 TRMT2AQ8IZ69 625 aaKnown RBP16.04■□□□□ 0.16
LINC00959-201ENST00000456581 RUNDC1Q96C34 613 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 TNNQ9UQP3 1299 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 UBR1Q8IWV7 1749 aa16.04■□□□□ 0.16
LINC00959-201ENST00000456581 NSD2O96028 1365 aa16.03■□□□□ 0.16
LINC00959-201ENST00000456581 ROBO2Q9HCK4 1378 aa16.03■□□□□ 0.16
LINC00959-201ENST00000456581 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
LINC00959-201ENST00000456581 NUDT16Q96DE0 195 aaKnown RBP16.02■□□□□ 0.16
LINC00959-201ENST00000456581 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
LINC00959-201ENST00000456581 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.16
LINC00959-201ENST00000456581 COG6Q9Y2V7 657 aa16.02■□□□□ 0.16
LINC00959-201ENST00000456581 NME9Q86XW9 330 aa16.02■□□□□ 0.15
LINC00959-201ENST00000456581 DDRGK1Q96HY6 314 aa16.02■□□□□ 0.15
LINC00959-201ENST00000456581 GSE1Q14687 1217 aa16.01■□□□□ 0.15
LINC00959-201ENST00000456581 ADAMTS13Q76LX8 1427 aa16.01■□□□□ 0.15
LINC00959-201ENST00000456581 DLC1Q96QB1 1528 aa16.01■□□□□ 0.15
LINC00959-201ENST00000456581 HDGFP51858 240 aaKnown RBP16.01■□□□□ 0.15
LINC00959-201ENST00000456581 PRR36Q9H6K5 1346 aa16■□□□□ 0.15
LINC00959-201ENST00000456581 E9PSI1 815 aa16■□□□□ 0.15
LINC00959-201ENST00000456581 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
LINC00959-201ENST00000456581 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
LINC00959-201ENST00000456581 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.99■□□□□ 0.15
LINC00959-201ENST00000456581 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
LINC00959-201ENST00000456581 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
LINC00959-201ENST00000456581 EMILIN1Q9Y6C2 1016 aa15.98■□□□□ 0.15
LINC00959-201ENST00000456581 NKTRP30414 1462 aaKnown RBP15.98■□□□□ 0.15
LINC00959-201ENST00000456581 C3P01024 1663 aa15.97■□□□□ 0.15
LINC00959-201ENST00000456581 IQSEC2Q5JU85 1478 aa15.97■□□□□ 0.15
LINC00959-201ENST00000456581 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
LINC00959-201ENST00000456581 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
LINC00959-201ENST00000456581 USP19O94966 1318 aa15.96■□□□□ 0.15
LINC00959-201ENST00000456581 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
LINC00959-201ENST00000456581 CLUAP1Q96AJ1 413 aa15.96■□□□□ 0.15
LINC00959-201ENST00000456581 KDM4FA0A1W2PPD8 638 aa15.95■□□□□ 0.14
LINC00959-201ENST00000456581 COL3A1P02461 1466 aaPredicted RBP15.95■□□□□ 0.14
LINC00959-201ENST00000456581 RRS1Q15050 365 aaKnown RBP15.95■□□□□ 0.14
LINC00959-201ENST00000456581 ARXQ96QS3 562 aa15.95■□□□□ 0.14
LINC00959-201ENST00000456581 PLEKHF1Q96S99 279 aa15.95■□□□□ 0.14
LINC00959-201ENST00000456581 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
LINC00959-201ENST00000456581 DIAPH1O60610 1272 aaKnown RBP15.95■□□□□ 0.14
LINC00959-201ENST00000456581 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
LINC00959-201ENST00000456581 TSR2Q969E8 191 aaKnown RBP15.94■□□□□ 0.14
LINC00959-201ENST00000456581 SLKQ9H2G2 1235 aaPredicted RBP15.94■□□□□ 0.14
LINC00959-201ENST00000456581 AMOTL2Q9Y2J4 779 aa15.94■□□□□ 0.14
LINC00959-201ENST00000456581 RLBP1P12271 317 aa15.94■□□□□ 0.14
LINC00959-201ENST00000456581 CPS1P31327 1500 aa15.94■□□□□ 0.14
LINC00959-201ENST00000456581 CPSF1Q10570 1443 aaKnown RBP15.93■□□□□ 0.14
LINC00959-201ENST00000456581 PLEKHG1Q9ULL1 1385 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 HMOX1P09601 288 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 TECPR2O15040 1411 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 FAM135BQ49AJ0 1406 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 KIF20BQ96Q89 1820 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 ATP7BP35670 1465 aa15.93■□□□□ 0.14
LINC00959-201ENST00000456581 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
LINC00959-201ENST00000456581 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.92■□□□□ 0.14
LINC00959-201ENST00000456581 MAP2P11137 1827 aaKnown RBP15.92■□□□□ 0.14
LINC00959-201ENST00000456581 ANKRD26Q9UPS8 1709 aa15.92■□□□□ 0.14
LINC00959-201ENST00000456581 TMPOP42166 694 aaKnown RBP15.92■□□□□ 0.14
LINC00959-201ENST00000456581 SOX12O15370 315 aa15.91■□□□□ 0.14
LINC00959-201ENST00000456581 MED14O60244 1454 aa15.91■□□□□ 0.14
LINC00959-201ENST00000456581 PMFBP1Q8TBY8 1022 aa15.91■□□□□ 0.14
LINC00959-201ENST00000456581 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
LINC00959-201ENST00000456581 TRIM35Q9UPQ4 493 aa15.91■□□□□ 0.14
LINC00959-201ENST00000456581 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
LINC00959-201ENST00000456581 SIRT1Q96EB6 747 aa15.9■□□□□ 0.14
LINC00959-201ENST00000456581 PCDHB15Q9Y5E8 787 aa15.9■□□□□ 0.14
LINC00959-201ENST00000456581 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
LINC00959-201ENST00000456581 PNPLA6Q8IY17 1366 aa15.89■□□□□ 0.14
LINC00959-201ENST00000456581 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
LINC00959-201ENST00000456581 ACEP12821 1306 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 PRKAR2BP31323 418 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 RIPK4P57078 832 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 WDR63Q8IWG1 891 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
LINC00959-201ENST00000456581 KNDC1Q76NI1 1749 aa15.88■□□□□ 0.13
LINC00959-201ENST00000456581 RIMS1Q86UR5 1692 aaKnown RBP15.88■□□□□ 0.13
LINC00959-201ENST00000456581 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
LINC00959-201ENST00000456581 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
LINC00959-201ENST00000456581 COG3Q96JB2 828 aa15.88■□□□□ 0.13
LINC00959-201ENST00000456581 ZNF142P52746 1687 aaPredicted RBP15.88■□□□□ 0.13
LINC00959-201ENST00000456581 CCDC27Q2M243 656 aa15.87■□□□□ 0.13
LINC00959-201ENST00000456581 THUMPD2Q9BTF0 503 aaKnown RBP15.87■□□□□ 0.13
LINC00959-201ENST00000456581 CDC42BPGQ6DT37 1551 aa15.86■□□□□ 0.13
LINC00959-201ENST00000456581 KCNA6P17658 529 aa15.86■□□□□ 0.13
LINC00959-201ENST00000456581 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
LINC00959-201ENST00000456581 TBX22Q9Y458 520 aa15.85■□□□□ 0.13
LINC00959-201ENST00000456581 ADGRB2O60241 1585 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms