RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 KIF20BQ96Q89 1820 aa25.89■■□□□ 1.73
CSPG5-203ENST00000456150 DLC1Q96QB1 1528 aa25.88■■□□□ 1.73
CSPG5-203ENST00000456150 HDGFL2Q7Z4V5 671 aaPredicted RBP25.88■■□□□ 1.73
CSPG5-203ENST00000456150 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.88■■□□□ 1.73
CSPG5-203ENST00000456150 NRXN3Q9Y4C0 1643 aa25.88■■□□□ 1.73
CSPG5-203ENST00000456150 GGNBP2Q9H3C7 697 aa25.87■■□□□ 1.73
CSPG5-203ENST00000456150 PANK1Q8TE04 598 aa25.87■■□□□ 1.73
CSPG5-203ENST00000456150 FRAT1Q92837 279 aaPredicted RBP25.86■■□□□ 1.73
CSPG5-203ENST00000456150 COG6Q9Y2V7 657 aa25.86■■□□□ 1.73
CSPG5-203ENST00000456150 FYB1O15117 783 aa25.86■■□□□ 1.73
CSPG5-203ENST00000456150 C8orf34Q49A92 452 aa25.86■■□□□ 1.73
CSPG5-203ENST00000456150 SETD1AO15047 1707 aaKnown RBP25.85■■□□□ 1.73
CSPG5-203ENST00000456150 LTKP29376 864 aa25.85■■□□□ 1.73
CSPG5-203ENST00000456150 RTL5Q5HYW3 569 aaPredicted RBP25.85■■□□□ 1.73
CSPG5-203ENST00000456150 RGS3P49796 1198 aa25.84■■□□□ 1.73
CSPG5-203ENST00000456150 VIRMAQ69YN4 1812 aaKnown RBP25.84■■□□□ 1.73
CSPG5-203ENST00000456150 CT47B1P0C2W7 299 aaPredicted RBP25.84■■□□□ 1.73
CSPG5-203ENST00000456150 CDK19Q9BWU1 502 aa25.84■■□□□ 1.73
CSPG5-203ENST00000456150 IGHDP01880 384 aa25.83■■□□□ 1.72
CSPG5-203ENST00000456150 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
CSPG5-203ENST00000456150 HDGFP51858 240 aaKnown RBP25.82■■□□□ 1.72
CSPG5-203ENST00000456150 PLEKHF1Q96S99 279 aa25.81■■□□□ 1.72
CSPG5-203ENST00000456150 MAPK8IP3Q9UPT6 1336 aa25.81■■□□□ 1.72
CSPG5-203ENST00000456150 PMFBP1Q8TBY8 1022 aa25.81■■□□□ 1.72
CSPG5-203ENST00000456150 PNNQ9H307 717 aaKnown RBP25.8■■□□□ 1.72
CSPG5-203ENST00000456150 TXNDC2Q86VQ3 553 aa25.79■■□□□ 1.72
CSPG5-203ENST00000456150 ATP7BP35670 1465 aa25.79■■□□□ 1.72
CSPG5-203ENST00000456150 TMPOP42166 694 aaKnown RBP25.78■■□□□ 1.72
CSPG5-203ENST00000456150 METP08581 1390 aa25.78■■□□□ 1.72
CSPG5-203ENST00000456150 CEP170BQ9Y4F5 1589 aaPredicted RBP25.78■■□□□ 1.72
CSPG5-203ENST00000456150 SLIT1O75093 1534 aa25.78■■□□□ 1.72
CSPG5-203ENST00000456150 PNPLA6Q8IY17 1366 aa25.78■■□□□ 1.72
CSPG5-203ENST00000456150 ARHGAP23Q9P227 1491 aa25.78■■□□□ 1.72
CSPG5-203ENST00000456150 DEKP35659 375 aaKnown RBP25.77■■□□□ 1.72
CSPG5-203ENST00000456150 CABP1Q9NZU7 370 aa25.77■■□□□ 1.72
CSPG5-203ENST00000456150 PPM1GO15355 546 aaPredicted RBP25.76■■□□□ 1.71
CSPG5-203ENST00000456150 DIAPH1O60610 1272 aaKnown RBP25.76■■□□□ 1.71
CSPG5-203ENST00000456150 THEMISQ8N1K5 641 aaPredicted RBP25.76■■□□□ 1.71
CSPG5-203ENST00000456150 IL16Q14005 1332 aa25.76■■□□□ 1.71
CSPG5-203ENST00000456150 CDC42BPGQ6DT37 1551 aa25.76■■□□□ 1.71
CSPG5-203ENST00000456150 BCL2L13Q9BXK5 485 aa25.74■■□□□ 1.71
CSPG5-203ENST00000456150 PLEKHG1Q9ULL1 1385 aa25.74■■□□□ 1.71
CSPG5-203ENST00000456150 ADAMTS13Q76LX8 1427 aa25.74■■□□□ 1.71
CSPG5-203ENST00000456150 RLBP1P12271 317 aa25.73■■□□□ 1.71
CSPG5-203ENST00000456150 EID1Q9Y6B2 187 aa25.73■■□□□ 1.71
CSPG5-203ENST00000456150 TRIM35Q9UPQ4 493 aa25.73■■□□□ 1.71
CSPG5-203ENST00000456150 ZKSCAN2Q63HK3 967 aa25.72■■□□□ 1.71
CSPG5-203ENST00000456150 USP35Q9P2H5 1018 aa25.72■■□□□ 1.71
CSPG5-203ENST00000456150 DAXXQ9UER7 740 aaPredicted RBP25.71■■□□□ 1.71
CSPG5-203ENST00000456150 LAS1LQ9Y4W2 734 aaKnown RBP25.7■■□□□ 1.7
CSPG5-203ENST00000456150 MVPQ14764 893 aaKnown RBP25.69■■□□□ 1.7
CSPG5-203ENST00000456150 TSR2Q969E8 191 aaKnown RBP25.69■■□□□ 1.7
CSPG5-203ENST00000456150 SLC26A8Q96RN1 970 aa25.69■■□□□ 1.7
CSPG5-203ENST00000456150 TNNQ9UQP3 1299 aa25.69■■□□□ 1.7
CSPG5-203ENST00000456150 WAPLQ7Z5K2 1190 aa25.68■■□□□ 1.7
CSPG5-203ENST00000456150 ZNF142P52746 1687 aaPredicted RBP25.68■■□□□ 1.7
CSPG5-203ENST00000456150 EXOSC9Q06265 439 aaKnown RBP25.68■■□□□ 1.7
CSPG5-203ENST00000456150 FTSJ3Q8IY81 847 aaKnown RBP25.68■■□□□ 1.7
CSPG5-203ENST00000456150 RWDD1Q9H446 243 aaPredicted RBP25.68■■□□□ 1.7
CSPG5-203ENST00000456150 PCDHB15Q9Y5E8 787 aa25.68■■□□□ 1.7
CSPG5-203ENST00000456150 FCHSD2O94868 740 aa25.67■■□□□ 1.7
CSPG5-203ENST00000456150 RIPK4P57078 832 aa25.67■■□□□ 1.7
CSPG5-203ENST00000456150 DZIP1LQ8IYY4 767 aaKnown RBP25.67■■□□□ 1.7
CSPG5-203ENST00000456150 KNDC1Q76NI1 1749 aa25.67■■□□□ 1.7
CSPG5-203ENST00000456150 SMC4Q9NTJ3 1288 aa25.67■■□□□ 1.7
CSPG5-203ENST00000456150 LRRC7Q96NW7 1537 aa25.66■■□□□ 1.7
CSPG5-203ENST00000456150 MAP2P11137 1827 aaKnown RBP25.65■■□□□ 1.7
CSPG5-203ENST00000456150 EDC4Q6P2E9 1401 aaKnown RBP25.65■■□□□ 1.7
CSPG5-203ENST00000456150 NEFMP07197 916 aa25.65■■□□□ 1.7
CSPG5-203ENST00000456150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.64■■□□□ 1.7
CSPG5-203ENST00000456150 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
CSPG5-203ENST00000456150 SETD1BQ9UPS6 1966 aaKnown RBP25.63■■□□□ 1.69
CSPG5-203ENST00000456150 FAM135BQ49AJ0 1406 aa25.63■■□□□ 1.69
CSPG5-203ENST00000456150 WASLO00401 505 aaPredicted RBP25.62■■□□□ 1.69
CSPG5-203ENST00000456150 POLKQ9UBT6 870 aa25.62■■□□□ 1.69
CSPG5-203ENST00000456150 PPIP5K1Q6PFW1 1433 aa25.62■■□□□ 1.69
CSPG5-203ENST00000456150 SSH1Q8WYL5 1049 aa25.6■■□□□ 1.69
CSPG5-203ENST00000456150 SIRT1Q96EB6 747 aa25.6■■□□□ 1.69
CSPG5-203ENST00000456150 RSPH6AQ9H0K4 717 aa25.6■■□□□ 1.69
CSPG5-203ENST00000456150 BCL11AQ9H165 835 aa25.6■■□□□ 1.69
CSPG5-203ENST00000456150 PTPRUQ92729 1446 aa25.6■■□□□ 1.69
CSPG5-203ENST00000456150 TECPR2O15040 1411 aa25.59■■□□□ 1.69
CSPG5-203ENST00000456150 ATF7IPQ6VMQ6 1270 aa25.59■■□□□ 1.69
CSPG5-203ENST00000456150 DDX19BQ9UMR2 479 aa25.59■■□□□ 1.69
CSPG5-203ENST00000456150 PDZRN3Q9UPQ7 1066 aa25.59■■□□□ 1.69
CSPG5-203ENST00000456150 KIF16BQ96L93 1317 aa25.58■■□□□ 1.69
CSPG5-203ENST00000456150 MON2Q7Z3U7 1717 aa25.58■■□□□ 1.69
CSPG5-203ENST00000456150 TRIM27P14373 513 aa25.58■■□□□ 1.69
CSPG5-203ENST00000456150 CPS1P31327 1500 aa25.58■■□□□ 1.69
CSPG5-203ENST00000456150 CDK12Q9NYV4 1490 aaPredicted RBP25.57■■□□□ 1.68
CSPG5-203ENST00000456150 PRKAR2BP31323 418 aa25.57■■□□□ 1.68
CSPG5-203ENST00000456150 TBX22Q9Y458 520 aa25.57■■□□□ 1.68
CSPG5-203ENST00000456150 ROBO2Q9HCK4 1378 aa25.57■■□□□ 1.68
CSPG5-203ENST00000456150 AATKQ6ZMQ8 1374 aa25.56■■□□□ 1.68
CSPG5-203ENST00000456150 ITSN1Q15811 1721 aa25.56■■□□□ 1.68
CSPG5-203ENST00000456150 IPO8O15397 1037 aaKnown RBP25.56■■□□□ 1.68
CSPG5-203ENST00000456150 ALDH1L2Q3SY69 923 aa25.56■■□□□ 1.68
CSPG5-203ENST00000456150 ANKLE2Q86XL3 938 aa25.56■■□□□ 1.68
CSPG5-203ENST00000456150 AKAP12Q02952 1782 aa25.55■■□□□ 1.68
CSPG5-203ENST00000456150 ZNF428Q96B54 188 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms