RNA–Protein interactions for RNA: ENST00000455814.2

LYRM4-202, Transcript of LYR motif containing 4, humanhuman

TSL 3

Gene LYRM4, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-202ENST00000455814 BCL9LQ86UU0 1499 aa12.39□□□□□ -0.43
LYRM4-202ENST00000455814 FAM83GA6ND36 823 aa12.38□□□□□ -0.43
LYRM4-202ENST00000455814 EVA1CP58658 441 aa12.38□□□□□ -0.43
LYRM4-202ENST00000455814 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
LYRM4-202ENST00000455814 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
LYRM4-202ENST00000455814 A0A0G2JS52 829 aa12.37□□□□□ -0.43
LYRM4-202ENST00000455814 MYT1Q01538 1121 aa12.37□□□□□ -0.43
LYRM4-202ENST00000455814 BTG4Q9NY30 223 aa12.37□□□□□ -0.43
LYRM4-202ENST00000455814 CABP1Q9NZU7 370 aa12.37□□□□□ -0.43
LYRM4-202ENST00000455814 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
LYRM4-202ENST00000455814 SLIT2O94813 1529 aa12.37□□□□□ -0.43
LYRM4-202ENST00000455814 ATP7BP35670 1465 aa12.36□□□□□ -0.43
LYRM4-202ENST00000455814 RGS12O14924 1447 aa12.36□□□□□ -0.43
LYRM4-202ENST00000455814 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
LYRM4-202ENST00000455814 PPIP5K1Q6PFW1 1433 aa12.35□□□□□ -0.43
LYRM4-202ENST00000455814 ONECUT3O60422 494 aaPredicted RBP12.34□□□□□ -0.43
LYRM4-202ENST00000455814 NLRP6P59044 892 aa12.34□□□□□ -0.43
LYRM4-202ENST00000455814 SEPT12Q8IYM1 358 aa12.34□□□□□ -0.43
LYRM4-202ENST00000455814 ARHGEF28Q8N1W1 1705 aaKnown RBP12.34□□□□□ -0.43
LYRM4-202ENST00000455814 KRT27Q7Z3Y8 459 aa12.33□□□□□ -0.44
LYRM4-202ENST00000455814 KCNH5Q8NCM2 988 aa12.33□□□□□ -0.44
LYRM4-202ENST00000455814 ITSN1Q15811 1721 aa12.33□□□□□ -0.44
LYRM4-202ENST00000455814 USP32Q8NFA0 1604 aa12.33□□□□□ -0.44
LYRM4-202ENST00000455814 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
LYRM4-202ENST00000455814 ZC3H6P61129 1189 aaKnown RBP12.32□□□□□ -0.44
LYRM4-202ENST00000455814 NUTM2GQ5VZR2 741 aa12.32□□□□□ -0.44
LYRM4-202ENST00000455814 PUS7Q96PZ0 661 aaKnown RBP12.32□□□□□ -0.44
LYRM4-202ENST00000455814 RALGAPBQ86X10 1494 aa12.32□□□□□ -0.44
LYRM4-202ENST00000455814 GCP02774 474 aa12.31□□□□□ -0.44
LYRM4-202ENST00000455814 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
LYRM4-202ENST00000455814 HDGFL2Q7Z4V5 671 aaPredicted RBP12.31□□□□□ -0.44
LYRM4-202ENST00000455814 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
LYRM4-202ENST00000455814 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
LYRM4-202ENST00000455814 C11orf95C9JLR9 678 aaPredicted RBP12.3□□□□□ -0.44
LYRM4-202ENST00000455814 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
LYRM4-202ENST00000455814 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
LYRM4-202ENST00000455814 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
LYRM4-202ENST00000455814 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
LYRM4-202ENST00000455814 ZRANB1Q9UGI0 708 aa12.3□□□□□ -0.44
LYRM4-202ENST00000455814 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
LYRM4-202ENST00000455814 KIAA0232Q92628 1395 aa12.3□□□□□ -0.44
LYRM4-202ENST00000455814 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
LYRM4-202ENST00000455814 CDCA8Q53HL2 280 aa12.29□□□□□ -0.44
LYRM4-202ENST00000455814 SPATA31A5Q5VU36 1347 aa12.29□□□□□ -0.44
LYRM4-202ENST00000455814 SPATA31A7Q8IWB4 1347 aa12.29□□□□□ -0.44
LYRM4-202ENST00000455814 PDE3BQ13370 1112 aa12.28□□□□□ -0.44
LYRM4-202ENST00000455814 CHRNA2Q15822 529 aa12.28□□□□□ -0.44
LYRM4-202ENST00000455814 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
LYRM4-202ENST00000455814 CPDO75976 1380 aa12.28□□□□□ -0.44
LYRM4-202ENST00000455814 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
LYRM4-202ENST00000455814 ZBTB7CA1YPR0 619 aa12.27□□□□□ -0.45
LYRM4-202ENST00000455814 BAG6P46379 1132 aa12.27□□□□□ -0.45
LYRM4-202ENST00000455814 NWD2Q9ULI1 1742 aa12.27□□□□□ -0.45
LYRM4-202ENST00000455814 USP6P35125 1406 aa12.27□□□□□ -0.45
LYRM4-202ENST00000455814 TRPM1Q7Z4N2 1603 aa12.26□□□□□ -0.45
LYRM4-202ENST00000455814 TRPM3Q9HCF6 1732 aaPredicted RBP12.26□□□□□ -0.45
LYRM4-202ENST00000455814 COL14A1Q05707 1796 aaKnown RBP12.26□□□□□ -0.45
LYRM4-202ENST00000455814 BARGINQ6ZT62 677 aa12.26□□□□□ -0.45
LYRM4-202ENST00000455814 TCP11L2Q8N4U5 519 aa12.26□□□□□ -0.45
LYRM4-202ENST00000455814 USP19O94966 1318 aa12.26□□□□□ -0.45
LYRM4-202ENST00000455814 TTC21BQ7Z4L5 1316 aa12.26□□□□□ -0.45
LYRM4-202ENST00000455814 KTN1Q86UP2 1357 aaKnown RBP12.26□□□□□ -0.45
LYRM4-202ENST00000455814 BLMP54132 1417 aaPredicted RBP12.26□□□□□ -0.45
LYRM4-202ENST00000455814 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
LYRM4-202ENST00000455814 TMF1P82094 1093 aa12.25□□□□□ -0.45
LYRM4-202ENST00000455814 FAM196AQ6ZSG2 479 aa12.25□□□□□ -0.45
LYRM4-202ENST00000455814 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
LYRM4-202ENST00000455814 SPATA31A1Q5TZJ5 1347 aa12.25□□□□□ -0.45
LYRM4-202ENST00000455814 CDCA7Q9BWT1 371 aaPredicted RBP12.24□□□□□ -0.45
LYRM4-202ENST00000455814 QRICH2Q9H0J4 1663 aa12.24□□□□□ -0.45
LYRM4-202ENST00000455814 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
LYRM4-202ENST00000455814 AATKQ6ZMQ8 1374 aa12.23□□□□□ -0.45
LYRM4-202ENST00000455814 ST20-MTHFSA0A0A6YYL1 179 aa12.23□□□□□ -0.45
LYRM4-202ENST00000455814 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
LYRM4-202ENST00000455814 TOM1L2Q6ZVM7 507 aa12.23□□□□□ -0.45
LYRM4-202ENST00000455814 GLI3P10071 1580 aa12.22□□□□□ -0.45
LYRM4-202ENST00000455814 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
LYRM4-202ENST00000455814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.21□□□□□ -0.45
LYRM4-202ENST00000455814 SLC12A5Q9H2X9 1139 aa12.21□□□□□ -0.45
LYRM4-202ENST00000455814 TOPAZ1Q8N9V7 1692 aa12.21□□□□□ -0.45
LYRM4-202ENST00000455814 SSH2Q76I76 1423 aa12.2□□□□□ -0.46
LYRM4-202ENST00000455814 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
LYRM4-202ENST00000455814 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
LYRM4-202ENST00000455814 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
LYRM4-202ENST00000455814 CPSF1Q10570 1443 aaKnown RBP12.2□□□□□ -0.46
LYRM4-202ENST00000455814 SOX12O15370 315 aa12.19□□□□□ -0.46
LYRM4-202ENST00000455814 ABCA3Q99758 1704 aa12.18□□□□□ -0.46
LYRM4-202ENST00000455814 DDB1Q16531 1140 aa12.18□□□□□ -0.46
LYRM4-202ENST00000455814 COG3Q96JB2 828 aa12.18□□□□□ -0.46
LYRM4-202ENST00000455814 CRB1P82279 1406 aa12.18□□□□□ -0.46
LYRM4-202ENST00000455814 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
LYRM4-202ENST00000455814 WDR17Q8IZU2 1322 aa12.17□□□□□ -0.46
LYRM4-202ENST00000455814 EXOC5O00471 708 aa12.16□□□□□ -0.46
LYRM4-202ENST00000455814 DEFB132Q7Z7B7 95 aa12.16□□□□□ -0.46
LYRM4-202ENST00000455814 TESK2Q96S53 571 aa12.16□□□□□ -0.46
LYRM4-202ENST00000455814 CARD10Q9BWT7 1032 aa12.16□□□□□ -0.46
LYRM4-202ENST00000455814 EDC4Q6P2E9 1401 aaKnown RBP12.16□□□□□ -0.46
LYRM4-202ENST00000455814 USP47Q96K76 1375 aa12.16□□□□□ -0.46
LYRM4-202ENST00000455814 APBA3O96018 575 aa12.15□□□□□ -0.46
LYRM4-202ENST00000455814 NBPF14Q5TI25 921 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms