RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 MRRFQ96E11 262 aaKnown RBP10.33□□□□□ -0.76
BRCC3-208ENST00000453705 SERPINA10Q9UK55 444 aa10.33□□□□□ -0.76
BRCC3-208ENST00000453705 A2MP01023 1474 aa10.33□□□□□ -0.76
BRCC3-208ENST00000453705 L3MBTL2Q969R5 705 aa10.33□□□□□ -0.76
BRCC3-208ENST00000453705 FNBP4Q8N3X1 1017 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-208ENST00000453705 CAMSAP1Q5T5Y3 1602 aa10.32□□□□□ -0.76
BRCC3-208ENST00000453705 AGLP35573 1532 aa10.32□□□□□ -0.76
BRCC3-208ENST00000453705 TESPA1A2RU30 521 aaPredicted RBP10.32□□□□□ -0.76
BRCC3-208ENST00000453705 AK7Q96M32 723 aa10.32□□□□□ -0.76
BRCC3-208ENST00000453705 KLHL42Q9P2K6 505 aa10.32□□□□□ -0.76
BRCC3-208ENST00000453705 IVNS1ABPQ9Y6Y0 642 aa10.32□□□□□ -0.76
BRCC3-208ENST00000453705 MYOM2P54296 1465 aa10.32□□□□□ -0.76
BRCC3-208ENST00000453705 MCM6Q14566 821 aa10.31□□□□□ -0.76
BRCC3-208ENST00000453705 PRAG1Q86YV5 1406 aa10.31□□□□□ -0.76
BRCC3-208ENST00000453705 IPO4Q8TEX9 1081 aaKnown RBP10.31□□□□□ -0.76
BRCC3-208ENST00000453705 CCDC144AA2RUR9 1427 aa10.31□□□□□ -0.76
BRCC3-208ENST00000453705 FAM69CQ0P6D2 419 aa10.3□□□□□ -0.76
BRCC3-208ENST00000453705 TERF2IPQ9NYB0 399 aa10.3□□□□□ -0.76
BRCC3-208ENST00000453705 ARHGAP31Q2M1Z3 1444 aa10.3□□□□□ -0.76
BRCC3-208ENST00000453705 TSPOAP1O95153 1857 aa10.3□□□□□ -0.76
BRCC3-208ENST00000453705 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
BRCC3-208ENST00000453705 FOXD4Q12950 439 aaPredicted RBP10.3□□□□□ -0.76
BRCC3-208ENST00000453705 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
BRCC3-208ENST00000453705 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
BRCC3-208ENST00000453705 MYO3AQ8NEV4 1616 aa10.3□□□□□ -0.76
BRCC3-208ENST00000453705 GORABQ5T7V8 394 aa10.3□□□□□ -0.76
BRCC3-208ENST00000453705 ADGRB3O60242 1522 aa10.29□□□□□ -0.76
BRCC3-208ENST00000453705 NME8Q8N427 588 aa10.29□□□□□ -0.76
BRCC3-208ENST00000453705 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
BRCC3-208ENST00000453705 PPLO60437 1756 aa10.29□□□□□ -0.76
BRCC3-208ENST00000453705 TRIM66O15016 1216 aa10.29□□□□□ -0.76
BRCC3-208ENST00000453705 ABCC3O15438 1527 aa10.29□□□□□ -0.76
BRCC3-208ENST00000453705 KANK1Q14678 1352 aa10.28□□□□□ -0.76
BRCC3-208ENST00000453705 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
BRCC3-208ENST00000453705 RBM26Q5T8P6 1007 aaKnown RBP10.28□□□□□ -0.76
BRCC3-208ENST00000453705 PLSCR2Q9NRY7 297 aa10.28□□□□□ -0.76
BRCC3-208ENST00000453705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.76
BRCC3-208ENST00000453705 CNTLNQ9NXG0 1405 aa10.28□□□□□ -0.76
BRCC3-208ENST00000453705 CDCA8Q53HL2 280 aa10.28□□□□□ -0.76
BRCC3-208ENST00000453705 EIF4G2P78344 907 aaKnown RBP eCLIP10.27□□□□□ -0.77
BRCC3-208ENST00000453705 DRC1Q96MC2 740 aa10.27□□□□□ -0.77
BRCC3-208ENST00000453705 SETBP1Q9Y6X0 1596 aa10.27□□□□□ -0.77
BRCC3-208ENST00000453705 MROH2AA6NES4 1674 aa10.27□□□□□ -0.77
BRCC3-208ENST00000453705 NBPF8Q3BBV2 869 aa10.27□□□□□ -0.77
BRCC3-208ENST00000453705 MIER1Q8N108 512 aa10.27□□□□□ -0.77
BRCC3-208ENST00000453705 CCDC7Q96M83 1385 aa10.26□□□□□ -0.77
BRCC3-208ENST00000453705 ROCK2O75116 1388 aaKnown RBP10.25□□□□□ -0.77
BRCC3-208ENST00000453705 FAM193AP78312 1265 aa10.25□□□□□ -0.77
BRCC3-208ENST00000453705 SIGLEC1Q9BZZ2 1709 aa10.25□□□□□ -0.77
BRCC3-208ENST00000453705 FTSJ3Q8IY81 847 aaKnown RBP10.25□□□□□ -0.77
BRCC3-208ENST00000453705 ARHGEF40Q8TER5 1519 aa10.25□□□□□ -0.77
BRCC3-208ENST00000453705 KDM5AP29375 1690 aaKnown RBP10.24□□□□□ -0.77
BRCC3-208ENST00000453705 HSPA5P11021 654 aaKnown RBP10.24□□□□□ -0.77
BRCC3-208ENST00000453705 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
BRCC3-208ENST00000453705 CDCA7Q9BWT1 371 aaPredicted RBP10.24□□□□□ -0.77
BRCC3-208ENST00000453705 NOS1P29475 1434 aa10.24□□□□□ -0.77
BRCC3-208ENST00000453705 PTMAP06454 111 aaKnown RBP10.23□□□□□ -0.77
BRCC3-208ENST00000453705 RALBP1Q15311 655 aa10.23□□□□□ -0.77
BRCC3-208ENST00000453705 AFAP1Q8N556 730 aa10.23□□□□□ -0.77
BRCC3-208ENST00000453705 RPS6KL1Q9Y6S9 549 aa10.23□□□□□ -0.77
BRCC3-208ENST00000453705 PREX1Q8TCU6 1659 aa10.23□□□□□ -0.77
BRCC3-208ENST00000453705 STK25O00506 426 aa10.23□□□□□ -0.77
BRCC3-208ENST00000453705 PPFIA4O75335 1185 aa10.23□□□□□ -0.77
BRCC3-208ENST00000453705 SREK1Q8WXA9 508 aaKnown RBP10.23□□□□□ -0.77
BRCC3-208ENST00000453705 SYNMO15061 1565 aa10.23□□□□□ -0.77
BRCC3-208ENST00000453705 USP47Q96K76 1375 aa10.22□□□□□ -0.77
BRCC3-208ENST00000453705 PAX3P23760 479 aa10.21□□□□□ -0.77
BRCC3-208ENST00000453705 CANXP27824 592 aaKnown RBP10.21□□□□□ -0.77
BRCC3-208ENST00000453705 SND1Q7KZF4 910 aaKnown RBP eCLIP10.21□□□□□ -0.77
BRCC3-208ENST00000453705 WASHC2AQ641Q2 1341 aa10.21□□□□□ -0.78
BRCC3-208ENST00000453705 TXNDC2Q86VQ3 553 aa10.21□□□□□ -0.78
BRCC3-208ENST00000453705 PNMA2Q9UL42 364 aa10.21□□□□□ -0.78
BRCC3-208ENST00000453705 COL17A1Q9UMD9 1497 aaPredicted RBP10.21□□□□□ -0.78
BRCC3-208ENST00000453705 KTN1Q86UP2 1357 aaKnown RBP10.2□□□□□ -0.78
BRCC3-208ENST00000453705 UGGT1Q9NYU2 1555 aa10.19□□□□□ -0.78
BRCC3-208ENST00000453705 PARNO95453 639 aaKnown RBP10.19□□□□□ -0.78
BRCC3-208ENST00000453705 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.19□□□□□ -0.78
BRCC3-208ENST00000453705 ZFYVE9O95405 1425 aa10.19□□□□□ -0.78
BRCC3-208ENST00000453705 NPATQ14207 1427 aa10.18□□□□□ -0.78
BRCC3-208ENST00000453705 RBM47A0AV96 593 aaKnown RBP10.18□□□□□ -0.78
BRCC3-208ENST00000453705 SOX12O15370 315 aa10.17□□□□□ -0.78
BRCC3-208ENST00000453705 NEFMP07197 916 aa10.17□□□□□ -0.78
BRCC3-208ENST00000453705 TCF3P15923 654 aa10.17□□□□□ -0.78
BRCC3-208ENST00000453705 GABBR1Q9UBS5 961 aa10.17□□□□□ -0.78
BRCC3-208ENST00000453705 SPATA31D1Q6ZQQ2 1576 aa10.17□□□□□ -0.78
BRCC3-208ENST00000453705 MYOM1P52179 1685 aa10.16□□□□□ -0.78
BRCC3-208ENST00000453705 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
BRCC3-208ENST00000453705 NEXMIFQ5QGS0 1516 aa10.16□□□□□ -0.78
BRCC3-208ENST00000453705 TMEM131LA2VDJ0 1609 aa10.16□□□□□ -0.78
BRCC3-208ENST00000453705 SBNO2Q9Y2G9 1366 aa10.16□□□□□ -0.78
BRCC3-208ENST00000453705 SCAF11Q99590 1463 aaKnown RBP10.16□□□□□ -0.78
BRCC3-208ENST00000453705 KIF7Q2M1P5 1343 aa10.15□□□□□ -0.78
BRCC3-208ENST00000453705 RPGRIP1LQ68CZ1 1315 aa10.15□□□□□ -0.78
BRCC3-208ENST00000453705 GLIPR1L2Q4G1C9 344 aa10.15□□□□□ -0.78
BRCC3-208ENST00000453705 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
BRCC3-208ENST00000453705 INSRP06213 1382 aa10.14□□□□□ -0.79
BRCC3-208ENST00000453705 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
BRCC3-208ENST00000453705 PMM1Q92871 262 aa10.14□□□□□ -0.79
BRCC3-208ENST00000453705 KCNA1Q09470 495 aa10.14□□□□□ -0.79
BRCC3-208ENST00000453705 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms