RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
DDR1-239ENST00000452441 HSCBQ8IWL3 235 aa14.05□□□□□ -0.16
DDR1-239ENST00000452441 RARSP54136 660 aaKnown RBP14.05□□□□□ -0.16
DDR1-239ENST00000452441 MROH2AA6NES4 1674 aa14.05□□□□□ -0.16
DDR1-239ENST00000452441 NME9Q86XW9 330 aa14.04□□□□□ -0.16
DDR1-239ENST00000452441 RTF1Q92541 710 aaKnown RBP14.04□□□□□ -0.16
DDR1-239ENST00000452441 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
DDR1-239ENST00000452441 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
DDR1-239ENST00000452441 PIK3C2GO75747 1445 aa14.04□□□□□ -0.16
DDR1-239ENST00000452441 MIS18AQ9NYP9 233 aa14.04□□□□□ -0.16
DDR1-239ENST00000452441 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
DDR1-239ENST00000452441 SSH1Q8WYL5 1049 aa14.03□□□□□ -0.16
DDR1-239ENST00000452441 ZNF330Q9Y3S2 320 aaPredicted RBP14.02□□□□□ -0.16
DDR1-239ENST00000452441 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.17
DDR1-239ENST00000452441 MAP3K4Q9Y6R4 1608 aa14.02□□□□□ -0.17
DDR1-239ENST00000452441 TRMT2AQ8IZ69 625 aaKnown RBP14.02□□□□□ -0.17
DDR1-239ENST00000452441 PPRC1Q5VV67 1664 aaKnown RBP14.01□□□□□ -0.17
DDR1-239ENST00000452441 KDM5AP29375 1690 aaKnown RBP14.01□□□□□ -0.17
DDR1-239ENST00000452441 ZNF518AQ6AHZ1 1483 aa14.01□□□□□ -0.17
DDR1-239ENST00000452441 TMEM57Q8N5G2 664 aa14.01□□□□□ -0.17
DDR1-239ENST00000452441 RPGRIP1LQ68CZ1 1315 aa14.01□□□□□ -0.17
DDR1-239ENST00000452441 FAM83GA6ND36 823 aa14□□□□□ -0.17
DDR1-239ENST00000452441 PDE3AQ14432 1141 aa14□□□□□ -0.17
DDR1-239ENST00000452441 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
DDR1-239ENST00000452441 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
DDR1-239ENST00000452441 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
DDR1-239ENST00000452441 C22orf23Q9BZE7 217 aa13.99□□□□□ -0.17
DDR1-239ENST00000452441 EFCAB6Q5THR3 1501 aa13.99□□□□□ -0.17
DDR1-239ENST00000452441 NUDT16Q96DE0 195 aaKnown RBP13.98□□□□□ -0.17
DDR1-239ENST00000452441 NAP1L5Q96NT1 182 aaPredicted RBP13.98□□□□□ -0.17
DDR1-239ENST00000452441 ARID3AQ99856 593 aa13.98□□□□□ -0.17
DDR1-239ENST00000452441 NLRP6P59044 892 aa13.98□□□□□ -0.17
DDR1-239ENST00000452441 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
DDR1-239ENST00000452441 FYB1O15117 783 aa13.97□□□□□ -0.17
DDR1-239ENST00000452441 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
DDR1-239ENST00000452441 NGEFQ8N5V2 710 aa13.97□□□□□ -0.17
DDR1-239ENST00000452441 CSB-PGBD3P0DP91 1061 aa13.97□□□□□ -0.17
DDR1-239ENST00000452441 MYOM2P54296 1465 aa13.97□□□□□ -0.17
DDR1-239ENST00000452441 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.17
DDR1-239ENST00000452441 TRIM27P14373 513 aa13.96□□□□□ -0.17
DDR1-239ENST00000452441 NPATQ14207 1427 aa13.96□□□□□ -0.17
DDR1-239ENST00000452441 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
DDR1-239ENST00000452441 KIF1BO60333 1816 aa13.95□□□□□ -0.18
DDR1-239ENST00000452441 MVPQ14764 893 aaKnown RBP13.95□□□□□ -0.18
DDR1-239ENST00000452441 PLCB2Q00722 1185 aa13.95□□□□□ -0.18
DDR1-239ENST00000452441 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDR1-239ENST00000452441 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
DDR1-239ENST00000452441 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
DDR1-239ENST00000452441 KIAA1210Q9ULL0 1709 aa13.95□□□□□ -0.18
DDR1-239ENST00000452441 IFT172Q9UG01 1749 aa13.95□□□□□ -0.18
DDR1-239ENST00000452441 KRT24Q2M2I5 525 aa13.94□□□□□ -0.18
DDR1-239ENST00000452441 CCDC9Q9Y3X0 531 aaKnown RBP13.94□□□□□ -0.18
DDR1-239ENST00000452441 USP19O94966 1318 aa13.94□□□□□ -0.18
DDR1-239ENST00000452441 ATF7IPQ6VMQ6 1270 aa13.94□□□□□ -0.18
DDR1-239ENST00000452441 OS9Q13438 667 aaPredicted RBP13.93□□□□□ -0.18
DDR1-239ENST00000452441 TRIM6-TRIM34B2RNG4 842 aa13.93□□□□□ -0.18
DDR1-239ENST00000452441 MCM10Q7L590 875 aa13.93□□□□□ -0.18
DDR1-239ENST00000452441 NRXN1Q9ULB1 1477 aa13.93□□□□□ -0.18
DDR1-239ENST00000452441 FRMPD1Q5SYB0 1578 aa13.93□□□□□ -0.18
DDR1-239ENST00000452441 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
DDR1-239ENST00000452441 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
DDR1-239ENST00000452441 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
DDR1-239ENST00000452441 ANP32BQ92688 251 aaKnown RBP13.91□□□□□ -0.18
DDR1-239ENST00000452441 TSPYL6Q8N831 410 aa13.91□□□□□ -0.18
DDR1-239ENST00000452441 RILPL2Q969X0 211 aa13.91□□□□□ -0.18
DDR1-239ENST00000452441 SMARCA5O60264 1052 aaPredicted RBP13.9□□□□□ -0.18
DDR1-239ENST00000452441 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
DDR1-239ENST00000452441 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
DDR1-239ENST00000452441 PHACTR3Q96KR7 559 aa13.9□□□□□ -0.18
DDR1-239ENST00000452441 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.18
DDR1-239ENST00000452441 ATAD2Q6PL18 1390 aa13.9□□□□□ -0.18
DDR1-239ENST00000452441 PSME1Q06323 249 aa13.9□□□□□ -0.18
DDR1-239ENST00000452441 POLR3AO14802 1390 aaPredicted RBP13.9□□□□□ -0.18
DDR1-239ENST00000452441 WASLO00401 505 aaPredicted RBP13.9□□□□□ -0.18
DDR1-239ENST00000452441 TWISTNBQ3B726 338 aaPredicted RBP13.9□□□□□ -0.18
DDR1-239ENST00000452441 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
DDR1-239ENST00000452441 ADGRB1O14514 1584 aa13.9□□□□□ -0.18
DDR1-239ENST00000452441 GOLGA6L3A6NEY3 463 aa13.9□□□□□ -0.19
DDR1-239ENST00000452441 WDR63Q8IWG1 891 aa13.9□□□□□ -0.19
DDR1-239ENST00000452441 A0A1W2PP64 1363 aa13.89□□□□□ -0.19
DDR1-239ENST00000452441 SHPRHQ149N8 1683 aa13.89□□□□□ -0.19
DDR1-239ENST00000452441 TSHZ3Q63HK5 1081 aa13.89□□□□□ -0.19
DDR1-239ENST00000452441 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
DDR1-239ENST00000452441 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
DDR1-239ENST00000452441 STK31Q9BXU1 1019 aa13.89□□□□□ -0.19
DDR1-239ENST00000452441 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
DDR1-239ENST00000452441 LMOD3Q0VAK6 560 aa13.88□□□□□ -0.19
DDR1-239ENST00000452441 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
DDR1-239ENST00000452441 F6X3S4 739 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 DTNBO60941 627 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 GNAI1P63096 354 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 MPNDQ8N594 471 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 MYO3AQ8NEV4 1616 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 NEURL4Q96JN8 1562 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 AEBP1Q8IUX7 1158 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 AMOTL2Q9Y2J4 779 aa13.87□□□□□ -0.19
DDR1-239ENST00000452441 SIGLEC1Q9BZZ2 1709 aa13.86□□□□□ -0.19
DDR1-239ENST00000452441 GOLGA6L22H0YM25 854 aa13.86□□□□□ -0.19
DDR1-239ENST00000452441 PRKCSHP14314 528 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms