RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 CHD2O14647 1828 aaKnown RBP12.9□□□□□ -0.34
RFC4-210ENST00000449502 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
RFC4-210ENST00000449502 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
RFC4-210ENST00000449502 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
RFC4-210ENST00000449502 ADAMTS8Q9UP79 889 aa12.87□□□□□ -0.35
RFC4-210ENST00000449502 DCCP43146 1447 aa12.87□□□□□ -0.35
RFC4-210ENST00000449502 INSRP06213 1382 aa12.86□□□□□ -0.35
RFC4-210ENST00000449502 NLRP6P59044 892 aa12.86□□□□□ -0.35
RFC4-210ENST00000449502 AEBP2Q6ZN18 517 aaPredicted RBP12.86□□□□□ -0.35
RFC4-210ENST00000449502 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
RFC4-210ENST00000449502 ORAI2Q96SN7 254 aa12.86□□□□□ -0.35
RFC4-210ENST00000449502 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
RFC4-210ENST00000449502 FOXO3O43524 673 aa12.85□□□□□ -0.35
RFC4-210ENST00000449502 DIAPH1O60610 1272 aaKnown RBP12.85□□□□□ -0.35
RFC4-210ENST00000449502 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
RFC4-210ENST00000449502 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
RFC4-210ENST00000449502 U2SURPO15042 1029 aaKnown RBP12.84□□□□□ -0.35
RFC4-210ENST00000449502 SOX12O15370 315 aa12.84□□□□□ -0.35
RFC4-210ENST00000449502 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
RFC4-210ENST00000449502 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFC4-210ENST00000449502 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
RFC4-210ENST00000449502 KRT28Q7Z3Y7 464 aa12.84□□□□□ -0.35
RFC4-210ENST00000449502 PNNQ9H307 717 aaKnown RBP12.84□□□□□ -0.35
RFC4-210ENST00000449502 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
RFC4-210ENST00000449502 NEFMP07197 916 aa12.83□□□□□ -0.36
RFC4-210ENST00000449502 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
RFC4-210ENST00000449502 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
RFC4-210ENST00000449502 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
RFC4-210ENST00000449502 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
RFC4-210ENST00000449502 NUTM2GQ5VZR2 741 aa12.82□□□□□ -0.36
RFC4-210ENST00000449502 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
RFC4-210ENST00000449502 NPHP3Q7Z494 1330 aa12.82□□□□□ -0.36
RFC4-210ENST00000449502 NALCNQ8IZF0 1738 aa12.82□□□□□ -0.36
RFC4-210ENST00000449502 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
RFC4-210ENST00000449502 AMPHP49418 695 aa12.81□□□□□ -0.36
RFC4-210ENST00000449502 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
RFC4-210ENST00000449502 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
RFC4-210ENST00000449502 EMILIN1Q9Y6C2 1016 aa12.81□□□□□ -0.36
RFC4-210ENST00000449502 ITSN1Q15811 1721 aa12.81□□□□□ -0.36
RFC4-210ENST00000449502 LRRC7Q96NW7 1537 aa12.81□□□□□ -0.36
RFC4-210ENST00000449502 MST1RQ04912 1400 aa12.8□□□□□ -0.36
RFC4-210ENST00000449502 KCNH5Q8NCM2 988 aa12.8□□□□□ -0.36
RFC4-210ENST00000449502 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
RFC4-210ENST00000449502 SLAIN2Q9P270 581 aa12.8□□□□□ -0.36
RFC4-210ENST00000449502 BLMP54132 1417 aaPredicted RBP12.79□□□□□ -0.36
RFC4-210ENST00000449502 STRCQ7RTU9 1775 aa12.79□□□□□ -0.36
RFC4-210ENST00000449502 SENP3-EIF4A1A0A087X0R7 540 aa12.79□□□□□ -0.36
RFC4-210ENST00000449502 FBLN1P23142 703 aa12.79□□□□□ -0.36
RFC4-210ENST00000449502 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
RFC4-210ENST00000449502 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
RFC4-210ENST00000449502 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
RFC4-210ENST00000449502 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
RFC4-210ENST00000449502 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
RFC4-210ENST00000449502 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
RFC4-210ENST00000449502 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
RFC4-210ENST00000449502 APAF1O14727 1248 aa12.77□□□□□ -0.37
RFC4-210ENST00000449502 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
RFC4-210ENST00000449502 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.37
RFC4-210ENST00000449502 BRINP3Q76B58 766 aa12.76□□□□□ -0.37
RFC4-210ENST00000449502 AKAP12Q02952 1782 aa12.76□□□□□ -0.37
RFC4-210ENST00000449502 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
RFC4-210ENST00000449502 KIF20BQ96Q89 1820 aa12.75□□□□□ -0.37
RFC4-210ENST00000449502 CDK12Q9NYV4 1490 aaPredicted RBP12.75□□□□□ -0.37
RFC4-210ENST00000449502 SMG6Q86US8 1419 aaKnown RBP12.74□□□□□ -0.37
RFC4-210ENST00000449502 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
RFC4-210ENST00000449502 FCHSD2O94868 740 aa12.74□□□□□ -0.37
RFC4-210ENST00000449502 IL13P35225 146 aa12.74□□□□□ -0.37
RFC4-210ENST00000449502 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
RFC4-210ENST00000449502 FLT4P35916 1363 aa12.73□□□□□ -0.37
RFC4-210ENST00000449502 KIF24Q5T7B8 1368 aa12.73□□□□□ -0.37
RFC4-210ENST00000449502 NEFLP07196 543 aa12.73□□□□□ -0.37
RFC4-210ENST00000449502 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
RFC4-210ENST00000449502 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
RFC4-210ENST00000449502 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
RFC4-210ENST00000449502 GCP02774 474 aa12.72□□□□□ -0.37
RFC4-210ENST00000449502 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
RFC4-210ENST00000449502 EIF4A2Q14240 407 aaKnown RBP12.72□□□□□ -0.37
RFC4-210ENST00000449502 NEUROD2Q15784 382 aa12.72□□□□□ -0.37
RFC4-210ENST00000449502 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
RFC4-210ENST00000449502 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
RFC4-210ENST00000449502 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.37
RFC4-210ENST00000449502 ARHGEF10O15013 1369 aa12.71□□□□□ -0.37
RFC4-210ENST00000449502 HMOX1P09601 288 aa12.71□□□□□ -0.37
RFC4-210ENST00000449502 HOXC9P31274 260 aa12.71□□□□□ -0.37
RFC4-210ENST00000449502 PRKAR2BP31323 418 aa12.71□□□□□ -0.37
RFC4-210ENST00000449502 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
RFC4-210ENST00000449502 COL3A1P02461 1466 aaPredicted RBP12.71□□□□□ -0.38
RFC4-210ENST00000449502 LTV1Q96GA3 475 aaPredicted RBP12.7□□□□□ -0.38
RFC4-210ENST00000449502 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
RFC4-210ENST00000449502 TNS3Q68CZ2 1445 aa12.7□□□□□ -0.38
RFC4-210ENST00000449502 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
RFC4-210ENST00000449502 SPATA31A3Q5VYP0 1347 aa12.69□□□□□ -0.38
RFC4-210ENST00000449502 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
RFC4-210ENST00000449502 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
RFC4-210ENST00000449502 IP6K1Q92551 441 aa12.69□□□□□ -0.38
RFC4-210ENST00000449502 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
RFC4-210ENST00000449502 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
RFC4-210ENST00000449502 USP19O94966 1318 aa12.68□□□□□ -0.38
RFC4-210ENST00000449502 TOM1O60784 492 aa12.68□□□□□ -0.38
RFC4-210ENST00000449502 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms