RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 USP17L4A6NCW7 530 aa8.87□□□□□ -0.99
RAB28P3-201ENST00000448325 FBXO45P0C2W1 286 aa8.87□□□□□ -0.99
RAB28P3-201ENST00000448325 NOM1Q5C9Z4 860 aaKnown RBP8.87□□□□□ -0.99
RAB28P3-201ENST00000448325 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
RAB28P3-201ENST00000448325 USP17L1Q7RTZ2 530 aa8.87□□□□□ -0.99
RAB28P3-201ENST00000448325 DEPDC4Q8N2C3 294 aa8.87□□□□□ -0.99
RAB28P3-201ENST00000448325 SKIP12755 728 aa8.86□□□□□ -0.99
RAB28P3-201ENST00000448325 SSFA2P28290 1259 aa8.86□□□□□ -0.99
RAB28P3-201ENST00000448325 Q6ZNB5 142 aa8.86□□□□□ -0.99
RAB28P3-201ENST00000448325 ARID4AP29374 1257 aaPredicted RBP8.85□□□□□ -0.99
RAB28P3-201ENST00000448325 GRIPAP1Q4V328 841 aa8.85□□□□□ -0.99
RAB28P3-201ENST00000448325 FAM174AQ8TBP5 190 aa8.85□□□□□ -0.99
RAB28P3-201ENST00000448325 MRRFQ96E11 262 aaKnown RBP8.85□□□□□ -0.99
RAB28P3-201ENST00000448325 PSDA5PKW4 1024 aaPredicted RBP8.84□□□□□ -0.99
RAB28P3-201ENST00000448325 USP17L5A8MUK1 530 aa8.84□□□□□ -0.99
RAB28P3-201ENST00000448325 CRTC2Q53ET0 693 aaPredicted RBP8.84□□□□□ -0.99
RAB28P3-201ENST00000448325 KCNK17Q96T54 332 aa8.84□□□□□ -0.99
RAB28P3-201ENST00000448325 SOWAHDA6NJG2 315 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L15C9J2P7 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L10C9JJH3 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L13C9JLJ4 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L12C9JPN9 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L11C9JVI0 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L21D6R901 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L18D6R9N7 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L22D6RA61 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L17D6RBQ6 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L19D6RCP7 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L20D6RJB6 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 CFHP08603 1231 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 PBX2P40425 430 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 USP17L24Q0WX57 530 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 NFATC2IPQ8NCF5 419 aa8.83□□□□□ -1
RAB28P3-201ENST00000448325 ZBBXA8MT70 800 aa8.82□□□□□ -1
RAB28P3-201ENST00000448325 SCNN1AP37088 669 aa8.82□□□□□ -1
RAB28P3-201ENST00000448325 ATP6V1AP38606 617 aa8.82□□□□□ -1
RAB28P3-201ENST00000448325 SERPINB4P48594 390 aa8.82□□□□□ -1
RAB28P3-201ENST00000448325 PLEKHM2Q8IWE5 1019 aa8.82□□□□□ -1
RAB28P3-201ENST00000448325 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
RAB28P3-201ENST00000448325 SEPT9Q9UHD8 586 aaPredicted RBP8.82□□□□□ -1
RAB28P3-201ENST00000448325 FAM196BA6NMK8 535 aa8.81□□□□□ -1
RAB28P3-201ENST00000448325 ZNF16P17020 682 aaPredicted RBP8.81□□□□□ -1
RAB28P3-201ENST00000448325 FAM69CQ0P6D2 419 aa8.81□□□□□ -1
RAB28P3-201ENST00000448325 RETREG3Q86VR2 466 aa8.81□□□□□ -1
RAB28P3-201ENST00000448325 ERCC3P19447 782 aa8.8□□□□□ -1
RAB28P3-201ENST00000448325 LYPD8Q6UX82 237 aa8.8□□□□□ -1
RAB28P3-201ENST00000448325 ZBED2Q9BTP6 218 aa8.8□□□□□ -1
RAB28P3-201ENST00000448325 BCL2L13Q9BXK5 485 aa8.8□□□□□ -1
RAB28P3-201ENST00000448325 RASA1P20936 1047 aa8.79□□□□□ -1
RAB28P3-201ENST00000448325 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
RAB28P3-201ENST00000448325 PTK7Q13308 1070 aa8.79□□□□□ -1
RAB28P3-201ENST00000448325 LARP1Q6PKG0 1096 aaKnown RBP8.79□□□□□ -1
RAB28P3-201ENST00000448325 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
RAB28P3-201ENST00000448325 CLP1Q92989 425 aaKnown RBP8.79□□□□□ -1
RAB28P3-201ENST00000448325 SIRT1Q96EB6 747 aa8.79□□□□□ -1
RAB28P3-201ENST00000448325 ATP2B4P23634 1241 aa8.78□□□□□ -1
RAB28P3-201ENST00000448325 DESI1Q6ICB0 168 aa8.78□□□□□ -1
RAB28P3-201ENST00000448325 FKBPLQ9UIM3 349 aa8.78□□□□□ -1
RAB28P3-201ENST00000448325 HDGFP51858 240 aaKnown RBP8.77□□□□□ -1.01
RAB28P3-201ENST00000448325 NCOA4Q13772 614 aa8.77□□□□□ -1.01
RAB28P3-201ENST00000448325 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
RAB28P3-201ENST00000448325 GIPC2Q8TF65 315 aa8.77□□□□□ -1.01
RAB28P3-201ENST00000448325 CDCA7Q9BWT1 371 aaPredicted RBP8.77□□□□□ -1.01
RAB28P3-201ENST00000448325 BIN2Q9UBW5 565 aaPredicted RBP8.77□□□□□ -1.01
RAB28P3-201ENST00000448325 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
RAB28P3-201ENST00000448325 MORN1Q5T089 497 aa8.76□□□□□ -1.01
RAB28P3-201ENST00000448325 SAMD7Q7Z3H4 446 aa8.76□□□□□ -1.01
RAB28P3-201ENST00000448325 ANKMY2Q8IV38 441 aa8.76□□□□□ -1.01
RAB28P3-201ENST00000448325 SLC4A3P48751 1232 aa8.75□□□□□ -1.01
RAB28P3-201ENST00000448325 PSEN2P49810 448 aa8.75□□□□□ -1.01
RAB28P3-201ENST00000448325 KCNH2Q12809 1159 aa8.75□□□□□ -1.01
RAB28P3-201ENST00000448325 RABGEF1Q9UJ41 708 aa8.75□□□□□ -1.01
RAB28P3-201ENST00000448325 ANKRD33BA6NCL7 494 aa8.74□□□□□ -1.01
RAB28P3-201ENST00000448325 ATP5J2-PTCD1G3V325 749 aa8.74□□□□□ -1.01
RAB28P3-201ENST00000448325 RNF40O75150 1001 aa8.74□□□□□ -1.01
RAB28P3-201ENST00000448325 DPYDQ12882 1025 aa8.74□□□□□ -1.01
RAB28P3-201ENST00000448325 MAP10Q9P2G4 905 aa8.74□□□□□ -1.01
RAB28P3-201ENST00000448325 CEP126Q9P2H0 1117 aa8.74□□□□□ -1.01
RAB28P3-201ENST00000448325 SLFNL1Q499Z3 407 aa8.73□□□□□ -1.01
RAB28P3-201ENST00000448325 NPAS4Q8IUM7 802 aa8.73□□□□□ -1.01
RAB28P3-201ENST00000448325 F12P00748 615 aaPredicted RBP8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 TCF3P15923 654 aa8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 FAM98CQ17RN3 349 aaKnown RBP8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 Q3C1V9 767 aa8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 RNF19BQ6ZMZ0 732 aa8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 PHTF2Q8N3S3 785 aa8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 PLPP7Q8NBV4 271 aa8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 AXIN2Q9Y2T1 843 aa8.72□□□□□ -1.01
RAB28P3-201ENST00000448325 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
RAB28P3-201ENST00000448325 ADGRD1Q6QNK2 874 aa8.71□□□□□ -1.02
RAB28P3-201ENST00000448325 BLOC1S3Q6QNY0 202 aa8.71□□□□□ -1.02
RAB28P3-201ENST00000448325 OGFOD1Q8N543 542 aa8.71□□□□□ -1.02
RAB28P3-201ENST00000448325 ZNF594Q96JF6 807 aaPredicted RBP8.71□□□□□ -1.02
RAB28P3-201ENST00000448325 CLDN10P78369 228 aa8.7□□□□□ -1.02
RAB28P3-201ENST00000448325 TSGA10IPQ3SY00 556 aa8.7□□□□□ -1.02
RAB28P3-201ENST00000448325 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
RAB28P3-201ENST00000448325 KCTD12Q96CX2 325 aaKnown RBP8.7□□□□□ -1.02
RAB28P3-201ENST00000448325 PUS7Q96PZ0 661 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms