RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 SPATA31A3Q5VYP0 1347 aa19.98■□□□□ 0.79
SREBF1-207ENST00000447641 EVC2Q86UK5 1308 aa19.98■□□□□ 0.79
SREBF1-207ENST00000447641 TESK2Q96S53 571 aa19.97■□□□□ 0.79
SREBF1-207ENST00000447641 TOPAZ1Q8N9V7 1692 aa19.97■□□□□ 0.79
SREBF1-207ENST00000447641 ITSN1Q15811 1721 aa19.96■□□□□ 0.79
SREBF1-207ENST00000447641 ST20-MTHFSA0A0A6YYL1 179 aa19.96■□□□□ 0.79
SREBF1-207ENST00000447641 CCDC125Q86Z20 511 aa19.96■□□□□ 0.79
SREBF1-207ENST00000447641 CCDC61Q9Y6R9 512 aa19.96■□□□□ 0.79
SREBF1-207ENST00000447641 USP47Q96K76 1375 aa19.95■□□□□ 0.79
SREBF1-207ENST00000447641 TNS3Q68CZ2 1445 aa19.95■□□□□ 0.78
SREBF1-207ENST00000447641 PLEKHG3A1L390 1219 aa19.95■□□□□ 0.78
SREBF1-207ENST00000447641 UNC5CLQ8IV45 518 aa19.95■□□□□ 0.78
SREBF1-207ENST00000447641 TRPM3Q9HCF6 1732 aaPredicted RBP19.95■□□□□ 0.78
SREBF1-207ENST00000447641 CABP2Q9NPB3 220 aa19.94■□□□□ 0.78
SREBF1-207ENST00000447641 CRYBG1Q9Y4K1 1723 aa19.93■□□□□ 0.78
SREBF1-207ENST00000447641 SRPK2P78362 688 aaKnown RBP19.93■□□□□ 0.78
SREBF1-207ENST00000447641 DEFB132Q7Z7B7 95 aa19.93■□□□□ 0.78
SREBF1-207ENST00000447641 PMFBP1Q8TBY8 1022 aa19.93■□□□□ 0.78
SREBF1-207ENST00000447641 KRT28Q7Z3Y7 464 aa19.92■□□□□ 0.78
SREBF1-207ENST00000447641 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
SREBF1-207ENST00000447641 POLR3AO14802 1390 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-207ENST00000447641 ALS2Q96Q42 1657 aa19.91■□□□□ 0.78
SREBF1-207ENST00000447641 SLC24A1O60721 1099 aa19.91■□□□□ 0.78
SREBF1-207ENST00000447641 SBNO1A3KN83 1393 aa19.89■□□□□ 0.77
SREBF1-207ENST00000447641 PSME1Q06323 249 aa19.89■□□□□ 0.77
SREBF1-207ENST00000447641 TNS1Q9HBL0 1735 aaKnown RBP19.88■□□□□ 0.77
SREBF1-207ENST00000447641 PPIP5K1Q6PFW1 1433 aa19.88■□□□□ 0.77
SREBF1-207ENST00000447641 ACEP12821 1306 aa19.87■□□□□ 0.77
SREBF1-207ENST00000447641 SEPT12Q8IYM1 358 aa19.87■□□□□ 0.77
SREBF1-207ENST00000447641 NGDNQ8NEJ9 315 aaKnown RBP19.87■□□□□ 0.77
SREBF1-207ENST00000447641 CABLES1Q8TDN4 633 aa19.87■□□□□ 0.77
SREBF1-207ENST00000447641 CABP1Q9NZU7 370 aa19.87■□□□□ 0.77
SREBF1-207ENST00000447641 RGPD1P0DJD0 1748 aa19.86■□□□□ 0.77
SREBF1-207ENST00000447641 VPS72Q15906 364 aa19.86■□□□□ 0.77
SREBF1-207ENST00000447641 THSD7AQ9UPZ6 1657 aa19.84■□□□□ 0.77
SREBF1-207ENST00000447641 ONECUT3O60422 494 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-207ENST00000447641 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.77
SREBF1-207ENST00000447641 EIF4G2P78344 907 aaKnown RBP eCLIP19.83■□□□□ 0.776e-6■■■■□ 25.1
SREBF1-207ENST00000447641 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
SREBF1-207ENST00000447641 TMF1P82094 1093 aa19.81■□□□□ 0.76
SREBF1-207ENST00000447641 CPSF1Q10570 1443 aaKnown RBP19.81■□□□□ 0.76
SREBF1-207ENST00000447641 BRD4O60885 1362 aaPredicted RBP19.81■□□□□ 0.76
SREBF1-207ENST00000447641 ARHGEF10O15013 1369 aa19.8■□□□□ 0.76
SREBF1-207ENST00000447641 AKAP12Q02952 1782 aa19.8■□□□□ 0.76
SREBF1-207ENST00000447641 SSH2Q76I76 1423 aa19.79■□□□□ 0.76
SREBF1-207ENST00000447641 PLEKHG5O94827 1062 aa19.79■□□□□ 0.76
SREBF1-207ENST00000447641 KRT27Q7Z3Y8 459 aa19.79■□□□□ 0.76
SREBF1-207ENST00000447641 ZNF692Q9BU19 519 aaPredicted RBP19.79■□□□□ 0.76
SREBF1-207ENST00000447641 USP6P35125 1406 aa19.78■□□□□ 0.76
SREBF1-207ENST00000447641 SLC12A5Q9H2X9 1139 aa19.78■□□□□ 0.76
SREBF1-207ENST00000447641 CD163L1Q9NR16 1453 aa19.78■□□□□ 0.76
SREBF1-207ENST00000447641 PHRF1Q9P1Y6 1649 aaKnown RBP19.77■□□□□ 0.76
SREBF1-207ENST00000447641 FAM83GA6ND36 823 aa19.77■□□□□ 0.76
SREBF1-207ENST00000447641 NINLQ9Y2I6 1382 aa19.76■□□□□ 0.75
SREBF1-207ENST00000447641 CDCA8Q53HL2 280 aa19.76■□□□□ 0.75
SREBF1-207ENST00000447641 PSDA5PKW4 1024 aaPredicted RBP19.75■□□□□ 0.75
SREBF1-207ENST00000447641 MON2Q7Z3U7 1717 aa19.74■□□□□ 0.75
SREBF1-207ENST00000447641 PAK3O75914 559 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-207ENST00000447641 HAP1P54257 671 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-207ENST00000447641 SF3B2Q13435 895 aaKnown RBP19.74■□□□□ 0.75
SREBF1-207ENST00000447641 CCDC9Q9Y3X0 531 aaKnown RBP19.74■□□□□ 0.75
SREBF1-207ENST00000447641 RREB1Q92766 1687 aa19.73■□□□□ 0.75
SREBF1-207ENST00000447641 DISP2A7MBM2 1401 aa19.73■□□□□ 0.75
SREBF1-207ENST00000447641 FAM98CQ17RN3 349 aaKnown RBP19.72■□□□□ 0.75
SREBF1-207ENST00000447641 LMOD2Q6P5Q4 547 aa19.72■□□□□ 0.75
SREBF1-207ENST00000447641 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
SREBF1-207ENST00000447641 KTN1Q86UP2 1357 aaKnown RBP19.71■□□□□ 0.75
SREBF1-207ENST00000447641 NRKQ7Z2Y5 1582 aa19.71■□□□□ 0.75
SREBF1-207ENST00000447641 TERF2IPQ9NYB0 399 aa19.71■□□□□ 0.75
SREBF1-207ENST00000447641 TTC21BQ7Z4L5 1316 aa19.71■□□□□ 0.75
SREBF1-207ENST00000447641 FAM182BQ5T319 152 aa19.7■□□□□ 0.74
SREBF1-207ENST00000447641 BTG4Q9NY30 223 aa19.7■□□□□ 0.74
SREBF1-207ENST00000447641 NUP188Q5SRE5 1749 aa19.69■□□□□ 0.74
SREBF1-207ENST00000447641 ABTB2Q8N961 1025 aa19.69■□□□□ 0.74
SREBF1-207ENST00000447641 TTC21AQ8NDW8 1320 aa19.69■□□□□ 0.74
SREBF1-207ENST00000447641 A0A1W2PP64 1363 aa19.69■□□□□ 0.74
SREBF1-207ENST00000447641 MYOM1P52179 1685 aa19.68■□□□□ 0.74
SREBF1-207ENST00000447641 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-207ENST00000447641 BAG6P46379 1132 aa19.68■□□□□ 0.74
SREBF1-207ENST00000447641 HDGFL2Q7Z4V5 671 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-207ENST00000447641 USP19O94966 1318 aa19.68■□□□□ 0.74
SREBF1-207ENST00000447641 SPATA31A5Q5VU36 1347 aa19.68■□□□□ 0.74
SREBF1-207ENST00000447641 SPATA31A7Q8IWB4 1347 aa19.68■□□□□ 0.74
SREBF1-207ENST00000447641 PIK3C2AO00443 1686 aa19.68■□□□□ 0.74
SREBF1-207ENST00000447641 EN1Q05925 392 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-207ENST00000447641 ANKRD36BQ8N2N9 1353 aa19.67■□□□□ 0.74
SREBF1-207ENST00000447641 EDC4Q6P2E9 1401 aaKnown RBP19.67■□□□□ 0.74
SREBF1-207ENST00000447641 A0A0G2JS52 829 aa19.66■□□□□ 0.74
SREBF1-207ENST00000447641 MYT1Q01538 1121 aa19.66■□□□□ 0.74
SREBF1-207ENST00000447641 NUTM2GQ5VZR2 741 aa19.66■□□□□ 0.74
SREBF1-207ENST00000447641 NLRP13Q86W25 1043 aa19.66■□□□□ 0.74
SREBF1-207ENST00000447641 USP54Q70EL1 1684 aa19.63■□□□□ 0.73
SREBF1-207ENST00000447641 LMO7Q8WWI1 1683 aa19.63■□□□□ 0.73
SREBF1-207ENST00000447641 USP31Q70CQ4 1352 aa19.63■□□□□ 0.73
SREBF1-207ENST00000447641 NLRP6P59044 892 aa19.63■□□□□ 0.73
SREBF1-207ENST00000447641 SLIT3O75094 1523 aa19.61■□□□□ 0.73
SREBF1-207ENST00000447641 GCP02774 474 aa19.61■□□□□ 0.73
SREBF1-207ENST00000447641 R3HDM1Q15032 1099 aaKnown RBP19.61■□□□□ 0.73
SREBF1-207ENST00000447641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.61■□□□□ 0.73
SREBF1-207ENST00000447641 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms