RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 NRDCO43847 1150 aa13.68□□□□□ -0.22
ZNF550-204ENST00000447310 CCDC39Q9UFE4 941 aa13.68□□□□□ -0.22
ZNF550-204ENST00000447310 ZMYM4Q5VZL5 1548 aa13.67□□□□□ -0.22
ZNF550-204ENST00000447310 MBD3O95983 291 aa13.67□□□□□ -0.22
ZNF550-204ENST00000447310 CLCN1P35523 988 aa13.67□□□□□ -0.22
ZNF550-204ENST00000447310 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
ZNF550-204ENST00000447310 FCHSD2O94868 740 aa13.66□□□□□ -0.22
ZNF550-204ENST00000447310 A0A0G2JS52 829 aa13.66□□□□□ -0.22
ZNF550-204ENST00000447310 CWC22Q9HCG8 908 aaKnown RBP13.66□□□□□ -0.22
ZNF550-204ENST00000447310 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
ZNF550-204ENST00000447310 PIK3C2GO75747 1445 aa13.66□□□□□ -0.22
ZNF550-204ENST00000447310 DENND4BO75064 1496 aaPredicted RBP13.66□□□□□ -0.22
ZNF550-204ENST00000447310 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
ZNF550-204ENST00000447310 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
ZNF550-204ENST00000447310 ITSN2Q9NZM3 1697 aa13.65□□□□□ -0.22
ZNF550-204ENST00000447310 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
ZNF550-204ENST00000447310 CDK19Q9BWU1 502 aa13.65□□□□□ -0.22
ZNF550-204ENST00000447310 NUP160Q12769 1436 aa13.65□□□□□ -0.22
ZNF550-204ENST00000447310 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
ZNF550-204ENST00000447310 GPATCH3Q96I76 525 aa13.65□□□□□ -0.22
ZNF550-204ENST00000447310 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
ZNF550-204ENST00000447310 A2MP01023 1474 aa13.65□□□□□ -0.22
ZNF550-204ENST00000447310 VPS37CA5D8V6 355 aaPredicted RBP13.64□□□□□ -0.23
ZNF550-204ENST00000447310 ERC2O15083 957 aa13.64□□□□□ -0.23
ZNF550-204ENST00000447310 EIF2S2P20042 333 aaKnown RBP13.64□□□□□ -0.23
ZNF550-204ENST00000447310 CYB5RLQ6IPT4 315 aa13.64□□□□□ -0.23
ZNF550-204ENST00000447310 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
ZNF550-204ENST00000447310 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
ZNF550-204ENST00000447310 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
ZNF550-204ENST00000447310 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
ZNF550-204ENST00000447310 KDM5BQ9UGL1 1544 aa13.63□□□□□ -0.23
ZNF550-204ENST00000447310 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
ZNF550-204ENST00000447310 KIAA0556O60303 1618 aa13.63□□□□□ -0.23
ZNF550-204ENST00000447310 SYCE3A1L190 88 aa13.63□□□□□ -0.23
ZNF550-204ENST00000447310 NFE2L2Q16236 605 aa13.63□□□□□ -0.23
ZNF550-204ENST00000447310 ALDH1L2Q3SY69 923 aa13.63□□□□□ -0.23
ZNF550-204ENST00000447310 MAP7D2Q96T17 732 aa13.63□□□□□ -0.23
ZNF550-204ENST00000447310 TSPY26PQ9H489 355 aa13.63□□□□□ -0.23
ZNF550-204ENST00000447310 HTATSF1O43719 755 aaKnown RBP13.63□□□□□ -0.23
ZNF550-204ENST00000447310 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
ZNF550-204ENST00000447310 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
ZNF550-204ENST00000447310 SMARCA5O60264 1052 aaPredicted RBP13.62□□□□□ -0.23
ZNF550-204ENST00000447310 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
ZNF550-204ENST00000447310 HSP90B1P14625 803 aaKnown RBP13.62□□□□□ -0.23
ZNF550-204ENST00000447310 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
ZNF550-204ENST00000447310 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
ZNF550-204ENST00000447310 KDM5CP41229 1560 aa13.62□□□□□ -0.23
ZNF550-204ENST00000447310 DISP1Q96F81 1524 aa13.62□□□□□ -0.23
ZNF550-204ENST00000447310 NUCB1Q02818 461 aa13.62□□□□□ -0.23
ZNF550-204ENST00000447310 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
ZNF550-204ENST00000447310 MCM2P49736 904 aa13.61□□□□□ -0.23
ZNF550-204ENST00000447310 INSRP06213 1382 aa13.61□□□□□ -0.23
ZNF550-204ENST00000447310 UQCRHLA0A096LP55 91 aa13.61□□□□□ -0.23
ZNF550-204ENST00000447310 UQCRHP07919 91 aa13.61□□□□□ -0.23
ZNF550-204ENST00000447310 ABCC11Q96J66 1382 aa13.61□□□□□ -0.23
ZNF550-204ENST00000447310 XPCQ01831 940 aaPredicted RBP13.6□□□□□ -0.23
ZNF550-204ENST00000447310 FIBPO43427 364 aa13.6□□□□□ -0.23
ZNF550-204ENST00000447310 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
ZNF550-204ENST00000447310 ZKSCAN1P17029 563 aaPredicted RBP13.6□□□□□ -0.23
ZNF550-204ENST00000447310 FBLN1P23142 703 aa13.6□□□□□ -0.23
ZNF550-204ENST00000447310 NOS1P29475 1434 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 RPAP2Q8IXW5 612 aaPredicted RBP13.59□□□□□ -0.23
ZNF550-204ENST00000447310 SMC5Q8IY18 1101 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 ZNF592Q92610 1267 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 SHANK2Q9UPX8 1470 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 RPGRIP1LQ68CZ1 1315 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
ZNF550-204ENST00000447310 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
ZNF550-204ENST00000447310 SURF6O75683 361 aaKnown RBP13.58□□□□□ -0.23
ZNF550-204ENST00000447310 KLHL40Q2TBA0 621 aa13.58□□□□□ -0.23
ZNF550-204ENST00000447310 C14orf93Q9H972 538 aaKnown RBP13.58□□□□□ -0.23
ZNF550-204ENST00000447310 EXOC6BQ9Y2D4 811 aa13.58□□□□□ -0.24
ZNF550-204ENST00000447310 GNAI2P04899 355 aa13.58□□□□□ -0.24
ZNF550-204ENST00000447310 UBTFL1P0CB47 393 aaPredicted RBP13.58□□□□□ -0.24
ZNF550-204ENST00000447310 MTERF4Q7Z6M4 381 aaKnown RBP13.58□□□□□ -0.24
ZNF550-204ENST00000447310 UPF3BQ9BZI7 483 aaKnown RBP13.58□□□□□ -0.24
ZNF550-204ENST00000447310 ATAD2Q6PL18 1390 aa13.58□□□□□ -0.24
ZNF550-204ENST00000447310 GNAI3P08754 354 aa13.58□□□□□ -0.24
ZNF550-204ENST00000447310 SNX21Q969T3 373 aa13.58□□□□□ -0.24
ZNF550-204ENST00000447310 BCL11BQ9C0K0 894 aaPredicted RBP13.58□□□□□ -0.24
ZNF550-204ENST00000447310 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.24
ZNF550-204ENST00000447310 GOLGA6L19H0YKK7 550 aa13.57□□□□□ -0.24
ZNF550-204ENST00000447310 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
ZNF550-204ENST00000447310 H3BQV1 296 aa13.57□□□□□ -0.24
ZNF550-204ENST00000447310 IFFO2Q5TF58 517 aa13.57□□□□□ -0.24
ZNF550-204ENST00000447310 ZNF521Q96K83 1311 aa13.57□□□□□ -0.24
ZNF550-204ENST00000447310 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
ZNF550-204ENST00000447310 ZBTB40Q9NUA8 1239 aa13.57□□□□□ -0.24
ZNF550-204ENST00000447310 C9orf78Q9NZ63 289 aaPredicted RBP13.57□□□□□ -0.24
ZNF550-204ENST00000447310 RBM27Q9P2N5 1060 aaKnown RBP13.56□□□□□ -0.24
ZNF550-204ENST00000447310 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
ZNF550-204ENST00000447310 BECN2A8MW95 431 aa13.56□□□□□ -0.24
ZNF550-204ENST00000447310 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
ZNF550-204ENST00000447310 EMILIN1Q9Y6C2 1016 aa13.56□□□□□ -0.24
ZNF550-204ENST00000447310 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
ZNF550-204ENST00000447310 LRRCC1Q9C099 1032 aa13.56□□□□□ -0.24
ZNF550-204ENST00000447310 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms