RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 FOXD4L3Q6VB84 417 aaPredicted RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 ZNF397Q8NF99 534 aaPredicted RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 ZFP91Q96JP5 570 aaPredicted RBP6.16□□□□□ -1.42
SCN11A-202ENST00000444237 MPHOSPH9Q99550 1183 aa6.16□□□□□ -1.42
SCN11A-202ENST00000444237 KIF21BO75037 1637 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 PBRM1Q86U86 1689 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 PTPN14Q15678 1187 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 ANKRD45Q5TZF3 282 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 PDZRN3Q9UPQ7 1066 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 KIAA0586Q9BVV6 1533 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 SHTN1A0MZ66 631 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 RGL3Q3MIN7 710 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 GBP3Q9H0R5 595 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 TOMM22Q9NS69 142 aa6.15□□□□□ -1.42
SCN11A-202ENST00000444237 GORABQ5T7V8 394 aa6.15□□□□□ -1.43
SCN11A-202ENST00000444237 STK11IPQ8N1F8 1099 aa6.15□□□□□ -1.43
SCN11A-202ENST00000444237 DYDC1Q8WWB3 177 aa6.15□□□□□ -1.43
SCN11A-202ENST00000444237 SRPK2P78362 688 aaKnown RBP6.15□□□□□ -1.43
SCN11A-202ENST00000444237 STAC3Q96MF2 364 aa6.15□□□□□ -1.43
SCN11A-202ENST00000444237 POLR3GO15318 223 aaPredicted RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 RRP12Q5JTH9 1297 aaKnown RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 INCENPQ9NQS7 918 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 V9GYY5 206 aaPredicted RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 ARHGAP5Q13017 1502 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 GOLGA6L7A0A1B0GV03 622 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 NEMFO60524 1076 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 KIAA1328Q86T90 577 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 GOLIM4O00461 696 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 C10orf67Q8IYJ2 551 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 BICD2Q8TD16 824 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 WDR97A6NE52 1622 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 KIF3BO15066 747 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 ZNF500O60304 480 aaPredicted RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 IGSF3O75054 1194 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 PNISRQ8TF01 805 aaKnown RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 USP47Q96K76 1375 aa6.14□□□□□ -1.43
SCN11A-202ENST00000444237 DZIP1LQ8IYY4 767 aaKnown RBP6.14□□□□□ -1.43
SCN11A-202ENST00000444237 LMAN1P49257 510 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 MPNDQ8N594 471 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 TBC1D32Q96NH3 1257 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 CT47B1P0C2W7 299 aaPredicted RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 LRSAM1Q6UWE0 723 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 MICALCLQ6ZW33 695 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 RTF1Q92541 710 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 RSPH14Q9UHP6 348 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 MYO6Q9UM54 1294 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 TSR1Q2NL82 804 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 CPSF2Q9P2I0 782 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 SMC3Q9UQE7 1217 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 ADAMTS12P58397 1594 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 RRBP1Q9P2E9 1410 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 WDR33Q9C0J8 1336 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 SETSIPP0DME0 302 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 ZSCAN23Q3MJ62 389 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 BRMS1Q9HCU9 246 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 THOC2Q8NI27 1593 aaKnown RBP6.13□□□□□ -1.43
SCN11A-202ENST00000444237 UACAQ9BZF9 1416 aa6.13□□□□□ -1.43
SCN11A-202ENST00000444237 GOLGA6L10A6NI86 522 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 OS9Q13438 667 aaPredicted RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 MORC1Q86VD1 984 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC146Q8IYE0 955 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC102AQ96A19 550 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 STK31Q9BXU1 1019 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 A0A0G2JS52 829 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 SF3A1Q15459 793 aaKnown RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 LRCH2Q5VUJ6 765 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 HECW1Q76N89 1606 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 EFCAB5A4FU69 1503 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 SMTNL1A8MU46 457 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CENPHQ9H3R5 247 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC171Q6TFL3 1326 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 PLEKHH2Q8IVE3 1493 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 APBB1O00213 710 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 ATP6V1AP38606 617 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC183Q5T5S1 534 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 GBP6Q6ZN66 633 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CDCA7LQ96GN5 454 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 C16orf45Q96MC5 204 aaPredicted RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 LRRFIP2Q9Y608 721 aaKnown RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 MRVI1Q9Y6F6 885 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 H3BQV1 296 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 MPHOSPH10O00566 681 aaKnown RBP6.12□□□□□ -1.43
SCN11A-202ENST00000444237 SMC2O95347 1197 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 IFFO2Q5TF58 517 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 CCDC73Q6ZRK6 1079 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 PPM1EQ8WY54 764 aa6.12□□□□□ -1.43
SCN11A-202ENST00000444237 POTEB2H3BUK9 544 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 IPO7O95373 1038 aaKnown RBP6.11□□□□□ -1.43
SCN11A-202ENST00000444237 MAP2K2P36507 400 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 ZRSR2Q15696 482 aaKnown RBP6.11□□□□□ -1.43
SCN11A-202ENST00000444237 USP25Q9UHP3 1055 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 ADCY5O95622 1261 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 DRC1Q96MC2 740 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 PPP1R9BQ96SB3 815 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 BAG4O95429 457 aaKnown RBP6.11□□□□□ -1.43
SCN11A-202ENST00000444237 U2AF2P26368 475 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCN11A-202ENST00000444237 C8orf34Q49A92 452 aa6.11□□□□□ -1.43
SCN11A-202ENST00000444237 CEP135Q66GS9 1140 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms